| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33862562
Identifier: 33862562
GI number: 33862562
Start: 327368
End: 328333
Strand: Direct
Name: 33862562
Synonym: PMT0289
Alternate gene names: NA
Gene position: 327368-328333 (Clockwise)
Preceding gene: 33862561
Following gene: 33862563
Centisome position: 13.58
GC content: 56.83
Gene sequence:
>966_bases TTGCTTCGTGATAGCAGGTTTGTGGCTGATAGTTGTCGTGCCTTGTTGGCGGTGCACCGGATTAATGGCTTGTCGCGCCA TGGTCGTAGTGAAGTTCAGCTACGACCTTGCCCTCAGCTTTTGCAGCAGGGTTGGCGAATCCGTGTGCATGGTCAGTTGC GCGCTCCGGCTCTAGGGCCTCATCCGCTATTGCCTGGGCCAGCGGAGCGGCTTCAACAGCAGGGAAGTTGGAGCCAATTC TGGGGAGATCAGGTTGAGGTGTTGCAACGTCCCTGGACGCCCATCGCTGATGCTCGCCATGCGCTTAAAGCAACTGGCAG GACCCGTTCGGGAGGATTGCTGGCGGCTTTGGTGCTGGGTCGTGCCCAAGTTGATCTGCCGCTTGATTTGGTGAAGGCGT TCCGCGTTGCTGGCCTTTTCCATGCCTTGGAGGCCTCGGGTTTTCACCTTTCTGTGCTGTTGGGAGCGTCGCTGGGGATT GCTCGGTTGCTGCCAAGGCCCCTCCGTTTGACGTTTGCTTCAACGGCACTGATCAGCTTTTTGATGCTGGCCGGACCACA ACCGTCGGTTGTGAGAGCTGTGTTGATGGGTAGCACGGTGTTGTTGATCAACAAAGGCGGAGGCCGCAGTCGTCCTCTAG GTGTGTTGCTAGCGACGTTGGTGCTGATGCTGTTGGTGAATCCCGCCTGGGCGCGATCGATTGGTTTTCAATTGAGTGCG GCAGCTACTGCAGGATTGGTCATCACAGCAGGGCCTCTAGAGCAGGCTCTATCCAAGCGTCTACCTACATGGCTTCGAGG GTTGGCACCAGCGCTGGCTGTTCCTTTGTCCGCAATCGTCTGGACGCTGCCACTACAGATTGTTCATTTTGGATCTGCAC TTGGCCAATGGCGCAGTTGTTCACCGGTCATCCCCAGCCTTGGTTGGTGCTGTTGTTGGTGTTGGGATTGCTGCTTTGGT TGGTAA
Upstream 100 bases:
>100_bases GACCCTGTGCGTTTGTTGGCGAGTGCCGGTTCTTTTTGATGGTTCATCGCGCCTACCGCTTTGAAGCAGCCTCGAAGGCC GGCTGCTGAGTGATGGCCGA
Downstream 100 bases:
>100_bases CGGGATTGCGTCACTGGCGTCACTGGCGTCACTGGGGAGTGGTTGCGTTGTTGGTTTGTTCGTTATCGCAGGCTGTTGTA CAGATGGGCGATGGACTCGT
Product: ComEC/Rec2-related protein
Products: NA
Alternate protein names: Competence Protein; DNA Internalization-Related Competence; ComEC/Rec2-Like Protein; Competence Protein ComE; ComEC/Rec2-Related Domain-Containing Protein; ComEC/Rec2-Related Protein Protein; DNA Internalization Competence; DNA Internalization Competence Protein
Number of amino acids: Translated: 321; Mature: 321
Protein sequence:
>321_residues MLRDSRFVADSCRALLAVHRINGLSRHGRSEVQLRPCPQLLQQGWRIRVHGQLRAPALGPHPLLPGPAERLQQQGSWSQF WGDQVEVLQRPWTPIADARHALKATGRTRSGGLLAALVLGRAQVDLPLDLVKAFRVAGLFHALEASGFHLSVLLGASLGI ARLLPRPLRLTFASTALISFLMLAGPQPSVVRAVLMGSTVLLINKGGGRSRPLGVLLATLVLMLLVNPAWARSIGFQLSA AATAGLVITAGPLEQALSKRLPTWLRGLAPALAVPLSAIVWTLPLQIVHFGSALGQWRSCSPVIPSLGWCCCWCWDCCFG W
Sequences:
>Translated_321_residues MLRDSRFVADSCRALLAVHRINGLSRHGRSEVQLRPCPQLLQQGWRIRVHGQLRAPALGPHPLLPGPAERLQQQGSWSQF WGDQVEVLQRPWTPIADARHALKATGRTRSGGLLAALVLGRAQVDLPLDLVKAFRVAGLFHALEASGFHLSVLLGASLGI ARLLPRPLRLTFASTALISFLMLAGPQPSVVRAVLMGSTVLLINKGGGRSRPLGVLLATLVLMLLVNPAWARSIGFQLSA AATAGLVITAGPLEQALSKRLPTWLRGLAPALAVPLSAIVWTLPLQIVHFGSALGQWRSCSPVIPSLGWCCCWCWDCCFG W >Mature_321_residues MLRDSRFVADSCRALLAVHRINGLSRHGRSEVQLRPCPQLLQQGWRIRVHGQLRAPALGPHPLLPGPAERLQQQGSWSQF WGDQVEVLQRPWTPIADARHALKATGRTRSGGLLAALVLGRAQVDLPLDLVKAFRVAGLFHALEASGFHLSVLLGASLGI ARLLPRPLRLTFASTALISFLMLAGPQPSVVRAVLMGSTVLLINKGGGRSRPLGVLLATLVLMLLVNPAWARSIGFQLSA AATAGLVITAGPLEQALSKRLPTWLRGLAPALAVPLSAIVWTLPLQIVHFGSALGQWRSCSPVIPSLGWCCCWCWDCCFG W
Specific function: Unknown
COG id: COG0658
COG function: function code R; Predicted membrane metal-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34641; Mature: 34641
Theoretical pI: Translated: 11.89; Mature: 11.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRDSRFVADSCRALLAVHRINGLSRHGRSEVQLRPCPQLLQQGWRIRVHGQLRAPALGP CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCHHHHHCCCEEEEECEEECCCCCC HPLLPGPAERLQQQGSWSQFWGDQVEVLQRPWTPIADARHALKATGRTRSGGLLAALVLG CCCCCCHHHHHHHCCCHHHHCCHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHC RAQVDLPLDLVKAFRVAGLFHALEASGFHLSVLLGASLGIARLLPRPLRLTFASTALISF CCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEHHHCHHHHHHHCCCCHHHHHHHHHHHHH LMLAGPQPSVVRAVLMGSTVLLINKGGGRSRPLGVLLATLVLMLLVNPAWARSIGFQLSA HHHCCCCHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCHHHHHHHCCEEEH AATAGLVITAGPLEQALSKRLPTWLRGLAPALAVPLSAIVWTLPLQIVHFGSALGQWRSC HHHCCEEEECCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC SPVIPSLGWCCCWCWDCCFGW CCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLRDSRFVADSCRALLAVHRINGLSRHGRSEVQLRPCPQLLQQGWRIRVHGQLRAPALGP CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCHHHHHCCCEEEEECEEECCCCCC HPLLPGPAERLQQQGSWSQFWGDQVEVLQRPWTPIADARHALKATGRTRSGGLLAALVLG CCCCCCHHHHHHHCCCHHHHCCHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHC RAQVDLPLDLVKAFRVAGLFHALEASGFHLSVLLGASLGIARLLPRPLRLTFASTALISF CCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEHHHCHHHHHHHCCCCHHHHHHHHHHHHH LMLAGPQPSVVRAVLMGSTVLLINKGGGRSRPLGVLLATLVLMLLVNPAWARSIGFQLSA HHHCCCCHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCHHHHHHHCCEEEH AATAGLVITAGPLEQALSKRLPTWLRGLAPALAVPLSAIVWTLPLQIVHFGSALGQWRSC HHHCCEEEECCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC SPVIPSLGWCCCWCWDCCFGW CCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA