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The map label for this gene is ppdD [C]

Identifier: 33862536

GI number: 33862536

Start: 302993

End: 303493

Strand: Reverse

Name: ppdD [C]

Synonym: PMT0263

Alternate gene names: 33862536

Gene position: 303493-302993 (Counterclockwise)

Preceding gene: 33862541

Following gene: 33862535

Centisome position: 12.59

GC content: 50.5

Gene sequence:

>501_bases
ATGATCAGGCAAGTATTGATATTGCATATCATCATGAGCATCCTCAACCAACAGCTAAAGCTTGCGCTGTTGAGACGCCA
GAAGGGAGCTAGTGCTTTACAGCAAGGCTTCACCCTGGTGGAGCTGATGATCGTGATTGTGATCGTTGGCATCCTGAGTG
CGGTTGCCCTGCCGCAATTCACCGGGATTAAAGAAAAAGCTGAGCTCAACACACAACTCGGCGAAGGAGCTGGGCTTGCC
AAAGAATGCGCCGCAGCAATCATTACCGACGGCCCATATCCCGATAATTACGCATCACTAACTCCAAGTACAGGCCTAAC
CATCTCAGGCAATTGCAATGATGGCTCTGGTGGAGCACCCTCGGCAAACGTCACCTACACCACACAAGCAGATGCCAATG
GAGGCAGGGCTAACTGCAATGGAAGCGCTCTCGCGAAAGGGAAAAAATGCCGAATTAGCGTAGACAAAGACAATGGACAA
GTAAGCCAATCAGCAGTCTGA

Upstream 100 bases:

>100_bases
TCTTGGGCCAACAGTTAACGAGCCTCTAAGCCGGTTCAAAGGGAACTCTCAGAGAAGCCTTAGACGATCCTTCACCACAA
AATCGCCATATCAAGGCAAT

Downstream 100 bases:

>100_bases
CCTTCAACGACAGAACGAGACGGATATAACATTAATAAACATAAGCACTAATTACAAATAGGCCATCAATAAGAGCAATT
GGTCCAATCAACACGGCTAT

Product: pilin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 166

Protein sequence:

>166_residues
MIRQVLILHIIMSILNQQLKLALLRRQKGASALQQGFTLVELMIVIVIVGILSAVALPQFTGIKEKAELNTQLGEGAGLA
KECAAAIITDGPYPDNYASLTPSTGLTISGNCNDGSGGAPSANVTYTTQADANGGRANCNGSALAKGKKCRISVDKDNGQ
VSQSAV

Sequences:

>Translated_166_residues
MIRQVLILHIIMSILNQQLKLALLRRQKGASALQQGFTLVELMIVIVIVGILSAVALPQFTGIKEKAELNTQLGEGAGLA
KECAAAIITDGPYPDNYASLTPSTGLTISGNCNDGSGGAPSANVTYTTQADANGGRANCNGSALAKGKKCRISVDKDNGQ
VSQSAV
>Mature_166_residues
MIRQVLILHIIMSILNQQLKLALLRRQKGASALQQGFTLVELMIVIVIVGILSAVALPQFTGIKEKAELNTQLGEGAGLA
KECAAAIITDGPYPDNYASLTPSTGLTISGNCNDGSGGAPSANVTYTTQADANGGRANCNGSALAKGKKCRISVDKDNGQ
VSQSAV

Specific function: Not Yet Known. [C]

COG id: COG4969

COG function: function code NU; Tfp pilus assembly protein, major pilin PilA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17169; Mature: 17169

Theoretical pI: Translated: 8.64; Mature: 8.64

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRQVLILHIIMSILNQQLKLALLRRQKGASALQQGFTLVELMIVIVIVGILSAVALPQF
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
TGIKEKAELNTQLGEGAGLAKECAAAIITDGPYPDNYASLTPSTGLTISGNCNDGSGGAP
CCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCC
SANVTYTTQADANGGRANCNGSALAKGKKCRISVDKDNGQVSQSAV
CCCEEEEEECCCCCCCCCCCCCHHCCCCEEEEEEECCCCCCCCCCC
>Mature Secondary Structure
MIRQVLILHIIMSILNQQLKLALLRRQKGASALQQGFTLVELMIVIVIVGILSAVALPQF
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
TGIKEKAELNTQLGEGAGLAKECAAAIITDGPYPDNYASLTPSTGLTISGNCNDGSGGAP
CCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCC
SANVTYTTQADANGGRANCNGSALAKGKKCRISVDKDNGQVSQSAV
CCCEEEEEECCCCCCCCCCCCCHHCCCCEEEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA