| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33862524
Identifier: 33862524
GI number: 33862524
Start: 283973
End: 284377
Strand: Reverse
Name: 33862524
Synonym: PMT0251
Alternate gene names: NA
Gene position: 284377-283973 (Counterclockwise)
Preceding gene: 33862527
Following gene: 33862523
Centisome position: 11.8
GC content: 36.3
Gene sequence:
>405_bases ATGACTAAGGACAAAACTGACTTAGCAATCCTTTTGTCTAAGAATGAAGACATTAAACCTCCTGATGAGGATAATGGTAG CTGGAGATTTGACTATATGGATGATGAGGTTATCGAAGAATTAATGAGGGTTGGTATAACCAAAAACACCTATGAGATTT TTCTGATCGACGTCTTCGAAGACAAACAGACCTTCATAGAGGAACACCTAAATGGTGACACTTCAATCGTAGATATTTAT TCAGATCATAACGAAATGTTTAGGAATAACTATCAGATAGGTTGTTACTGGGTGAACAAACACTTGAACGACACTCATTA TAAGTTCAATTTTCCCTTTGTTGTTTTCTACCATCAACAACATAGAAAGGAGGAATGGACACGTTACGTTTCTGTAGACG ATTGA
Upstream 100 bases:
>100_bases ACTGATGATCTCCTAGAAGGTGTTGGTTATGATGGTCAAAAGGTTGACATCCTGAGAAGCTCCTTAAAACAACCGTTTTT ATTCTCCCGCTTAGAGAGTC
Downstream 100 bases:
>100_bases TTACCGCTACATCTGAATACAATCAAATCTTTATGCTGGGAACTACTAATATTTCATCCAGCCATACTCATTACTTGGAC TACTGAACCAATCCATAGTC
Product: replication protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 134; Mature: 133
Protein sequence:
>134_residues MTKDKTDLAILLSKNEDIKPPDEDNGSWRFDYMDDEVIEELMRVGITKNTYEIFLIDVFEDKQTFIEEHLNGDTSIVDIY SDHNEMFRNNYQIGCYWVNKHLNDTHYKFNFPFVVFYHQQHRKEEWTRYVSVDD
Sequences:
>Translated_134_residues MTKDKTDLAILLSKNEDIKPPDEDNGSWRFDYMDDEVIEELMRVGITKNTYEIFLIDVFEDKQTFIEEHLNGDTSIVDIY SDHNEMFRNNYQIGCYWVNKHLNDTHYKFNFPFVVFYHQQHRKEEWTRYVSVDD >Mature_133_residues TKDKTDLAILLSKNEDIKPPDEDNGSWRFDYMDDEVIEELMRVGITKNTYEIFLIDVFEDKQTFIEEHLNGDTSIVDIYS DHNEMFRNNYQIGCYWVNKHLNDTHYKFNFPFVVFYHQQHRKEEWTRYVSVDD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16287; Mature: 16156
Theoretical pI: Translated: 4.40; Mature: 4.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKDKTDLAILLSKNEDIKPPDEDNGSWRFDYMDDEVIEELMRVGITKNTYEIFLIDVFE CCCCCCEEEEEEECCCCCCCCCCCCCCEEEECCCHHHHHHHHHCCCCCCCEEEEEEEEEC DKQTFIEEHLNGDTSIVDIYSDHNEMFRNNYQIGCYWVNKHLNDTHYKFNFPFVVFYHQQ CHHHHHHHHCCCCCEEEEEECCCHHHHHCCCEEEEEEECCCCCCCEEEEECCEEEEEECC HRKEEWTRYVSVDD CCHHHHHEEEECCC >Mature Secondary Structure TKDKTDLAILLSKNEDIKPPDEDNGSWRFDYMDDEVIEELMRVGITKNTYEIFLIDVFE CCCCCEEEEEEECCCCCCCCCCCCCCEEEECCCHHHHHHHHHCCCCCCCEEEEEEEEEC DKQTFIEEHLNGDTSIVDIYSDHNEMFRNNYQIGCYWVNKHLNDTHYKFNFPFVVFYHQQ CHHHHHHHHCCCCCEEEEEECCCHHHHHCCCEEEEEEECCCCCCCEEEEECCEEEEEECC HRKEEWTRYVSVDD CCHHHHHEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA