| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is cyaD [H]
Identifier: 33862349
GI number: 33862349
Start: 79135
End: 80310
Strand: Reverse
Name: cyaD [H]
Synonym: PMT0076
Alternate gene names: 33862349
Gene position: 80310-79135 (Counterclockwise)
Preceding gene: 33862350
Following gene: 33862347
Centisome position: 3.33
GC content: 48.72
Gene sequence:
>1176_bases ATGAGCAACAAGCCCAACCCCGTCGGCGGACTGATCCGCAGAGCTCAAAACCAACTAGAGCAGAAAGTAAGCTCTGTGTC ACACGATGAAAGCGTGCTCCAGCAAAGCCGCTTTTGGATGCGTGCTGTGACTTGGAGCCTGATCGGCACAACAGCCTTTG CAGTGGGCTGGTTGGCCATCGCGCGCACGGAAGAAATCGTTGTCGCACAAGGCAAACTTGAACCATTAGGCGATGTCAAA GAGATTCAAATCCCAGTTGGAGGAGTCGCTAGGGACATCCTTATCAAAGGAGGTGATCGCGTCAGTAAAGGTCAAATTCT GATCCAGCTCGACACTGAAACATCCTCAGAACAAGTGAACTCCTTAGAAGCTCAGTTGACAAAAAAACAGCAACAACTAA AGCTCAAACTTGAAGAACAACAGGGAACGCTACATCTCAGCCAAGAACAAGTCGCCACAACCAGAGATAATCTGGCCCTT GAACAACAAATCCTTAGCCGGTTTGAATTTCTTAGCGCACAGGGCGCTTACTCTGAGCTTCAGTATTTACAGCAACTCAA CAAGGTACGAGAACTGCGTGGAAGGGTCACCAAAGAGAAATTGGATGGCGCTCGCCAACAATCAATCCTCAATCAAGAAA TTGAACAGCTCAATTCCCAATTAGCCCAGCTTAAGGCTCAACTCACTGAAGCAAAAGTAACACTGAAATACCAGTCTTTG CGTTCTCCAGTGGATGGGGTGGTGTTTGATCTCAAGCCAACCACGCCTGGCTTTGTCGCCCAGTCAAGTGAGCCTGTGCT CAAGATCGTGCCCTTCAAAAACTTGGAAGCCGATGTGGAAATCCCCAGCAACAAAATTGGTTTCGTTCGCGAAGGCATGT CCGTTGACATCAGTATTGATTCCTTCCCAGCTACAGACTTCGGTGTACTGGAAGGTAAGGTGACCTCGATTGGCTCCGAC GCACTTCCACCCGATCAACAAGAACAAAGACAGGAATACCGCTTCCCAGCCACCATTCAGCTCGACAGCCAACAACTCAA ACTCAAGAACGGCACCACGCTTCCCTTACAAGTAGGAATGTCGCTCACTGCAAATATCAAACTGCGCAGTGTGACCTATT TACAACTACTGCTTGGCCAGTTCCAGAGTAAAACCGATTCACTCAGGCAACTATGA
Upstream 100 bases:
>100_bases ATGCATCAAGGGGCAATCGTGGAAATGGGCACTCACGAAGCCTTGATGGAAAAACGAGGTCGGTACTACGCCCTCTATCG CCAGCAGGAGTCGAGCTGAA
Downstream 100 bases:
>100_bases CGCCCGCAACAGAGCATTGACCGTCGCTGCAACCAGACCAGCCCCACCACGACTGCCCTCAAGGCGAATCTGAGCCAGCC CACTAGCCAAAAGCCTGCGC
Product: transporter component
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 391; Mature: 390
Protein sequence:
>391_residues MSNKPNPVGGLIRRAQNQLEQKVSSVSHDESVLQQSRFWMRAVTWSLIGTTAFAVGWLAIARTEEIVVAQGKLEPLGDVK EIQIPVGGVARDILIKGGDRVSKGQILIQLDTETSSEQVNSLEAQLTKKQQQLKLKLEEQQGTLHLSQEQVATTRDNLAL EQQILSRFEFLSAQGAYSELQYLQQLNKVRELRGRVTKEKLDGARQQSILNQEIEQLNSQLAQLKAQLTEAKVTLKYQSL RSPVDGVVFDLKPTTPGFVAQSSEPVLKIVPFKNLEADVEIPSNKIGFVREGMSVDISIDSFPATDFGVLEGKVTSIGSD ALPPDQQEQRQEYRFPATIQLDSQQLKLKNGTTLPLQVGMSLTANIKLRSVTYLQLLLGQFQSKTDSLRQL
Sequences:
>Translated_391_residues MSNKPNPVGGLIRRAQNQLEQKVSSVSHDESVLQQSRFWMRAVTWSLIGTTAFAVGWLAIARTEEIVVAQGKLEPLGDVK EIQIPVGGVARDILIKGGDRVSKGQILIQLDTETSSEQVNSLEAQLTKKQQQLKLKLEEQQGTLHLSQEQVATTRDNLAL EQQILSRFEFLSAQGAYSELQYLQQLNKVRELRGRVTKEKLDGARQQSILNQEIEQLNSQLAQLKAQLTEAKVTLKYQSL RSPVDGVVFDLKPTTPGFVAQSSEPVLKIVPFKNLEADVEIPSNKIGFVREGMSVDISIDSFPATDFGVLEGKVTSIGSD ALPPDQQEQRQEYRFPATIQLDSQQLKLKNGTTLPLQVGMSLTANIKLRSVTYLQLLLGQFQSKTDSLRQL >Mature_390_residues SNKPNPVGGLIRRAQNQLEQKVSSVSHDESVLQQSRFWMRAVTWSLIGTTAFAVGWLAIARTEEIVVAQGKLEPLGDVKE IQIPVGGVARDILIKGGDRVSKGQILIQLDTETSSEQVNSLEAQLTKKQQQLKLKLEEQQGTLHLSQEQVATTRDNLALE QQILSRFEFLSAQGAYSELQYLQQLNKVRELRGRVTKEKLDGARQQSILNQEIEQLNSQLAQLKAQLTEAKVTLKYQSLR SPVDGVVFDLKPTTPGFVAQSSEPVLKIVPFKNLEADVEIPSNKIGFVREGMSVDISIDSFPATDFGVLEGKVTSIGSDA LPPDQQEQRQEYRFPATIQLDSQQLKLKNGTTLPLQVGMSLTANIKLRSVTYLQLLLGQFQSKTDSLRQL
Specific function: CyaD is necessary for transport of calmodulin-sensitive adenylate cyclase-hemolysin (cyclolysin) [H]
COG id: COG0845
COG function: function code M; Membrane-fusion protein
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003997 - InterPro: IPR006143 - InterPro: IPR006144 - InterPro: IPR010129 [H]
Pfam domain/function: PF00529 HlyD [H]
EC number: NA
Molecular weight: Translated: 43459; Mature: 43328
Theoretical pI: Translated: 7.67; Mature: 7.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNKPNPVGGLIRRAQNQLEQKVSSVSHDESVLQQSRFWMRAVTWSLIGTTAFAVGWLAI CCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARTEEIVVAQGKLEPLGDVKEIQIPVGGVARDILIKGGDRVSKGQILIQLDTETSSEQVN HCCCEEEEECCCCCCCCCCEEEEECCCCCEEEHEEECCCCCCCCEEEEEECCCCCHHHHH SLEAQLTKKQQQLKLKLEEQQGTLHLSQEQVATTRDNLALEQQILSRFEFLSAQGAYSEL HHHHHHHHHHHHHHEEEECCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH QYLQQLNKVRELRGRVTKEKLDGARQQSILNQEIEQLNSQLAQLKAQLTEAKVTLKYQSL HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHH RSPVDGVVFDLKPTTPGFVAQSSEPVLKIVPFKNLEADVEIPSNKIGFVREGMSVDISID CCCCCCEEEEECCCCCCCEECCCCCEEEEECCCCCCCCEECCCCCCCCEECCCEEEEEEC SFPATDFGVLEGKVTSIGSDALPPDQQEQRQEYRFPATIQLDSQQLKLKNGTTLPLQVGM CCCCCCCHHCCCEEEECCCCCCCCCHHHHHHHCCCCEEEEECCCCEEECCCCEEEEEECC SLTANIKLRSVTYLQLLLGQFQSKTDSLRQL EEEEEEEEHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SNKPNPVGGLIRRAQNQLEQKVSSVSHDESVLQQSRFWMRAVTWSLIGTTAFAVGWLAI CCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARTEEIVVAQGKLEPLGDVKEIQIPVGGVARDILIKGGDRVSKGQILIQLDTETSSEQVN HCCCEEEEECCCCCCCCCCEEEEECCCCCEEEHEEECCCCCCCCEEEEEECCCCCHHHHH SLEAQLTKKQQQLKLKLEEQQGTLHLSQEQVATTRDNLALEQQILSRFEFLSAQGAYSEL HHHHHHHHHHHHHHEEEECCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH QYLQQLNKVRELRGRVTKEKLDGARQQSILNQEIEQLNSQLAQLKAQLTEAKVTLKYQSL HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHH RSPVDGVVFDLKPTTPGFVAQSSEPVLKIVPFKNLEADVEIPSNKIGFVREGMSVDISID CCCCCCEEEEECCCCCCCEECCCCCEEEEECCCCCCCCEECCCCCCCCEECCCEEEEEEC SFPATDFGVLEGKVTSIGSDALPPDQQEQRQEYRFPATIQLDSQQLKLKNGTTLPLQVGM CCCCCCCHHCCCEEEECCCCCCCCCHHHHHHHCCCCEEEEECCCCEEECCCCEEEEEECC SLTANIKLRSVTYLQLLLGQFQSKTDSLRQL EEEEEEEEHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2905265; 12910271 [H]