| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33862347
Identifier: 33862347
GI number: 33862347
Start: 77441
End: 78451
Strand: Reverse
Name: 33862347
Synonym: PMT0074
Alternate gene names: NA
Gene position: 78451-77441 (Counterclockwise)
Preceding gene: 33862349
Following gene: 33862346
Centisome position: 3.25
GC content: 56.87
Gene sequence:
>1011_bases ATGCCGATCCATCTCATCTGGGGCGATGATGCCGCCGCCCGAGACCACGCCATCGAGACTCTGATCGGCGATGTTGTCGA TCAAGCATGGAGCAGCATCAACCTCAGCCGCCTCGATGGAGCTGATGCTGGGCAAGCCAGCCAAGCCTTGGCAGAAGCAC GCACACCACCCTTCGGAAGTGGCGGACGACTTGTGCTGTTACAGCGCAGTCCGTTCTGCAACGCTTGCCCTAGCGAACTT GCGAATCGTTTCGAAGACGTGCTGGATCTAATTCCAGAAACCAGCCACCTGGTGCTATGCAACCCCAACAAACCAGACGG CCGACTGCGAACAACGAAGGCCTTACAAAAGCTTGTGAAGTTGAAGCAAGCCAGCGAAAAAAGCTTTCTGCTGCCAGCGA TCTGGGATGGTGCCGGTCAGCAGGAGCTGGTGGAACGCACCGCCCGAGACTTAGGTCTACAGCTGGAGCCTGAAGCCACT GCAGCGCTGGTGGAAGCCATCGGCAATGACAGTACGCGACTCACCGCAGAGCTGCAAAAACTGGCTCTCCATGCCGACAT TCGCCAAGAAAGCGCAACTGAGAACCAATCACCAACTTTGATTAAAGCCGAAAACGTAGCCGCGCTGATTGAAGGAATGG CCACCAATGCACTACAGGTTGGAGATTCACTCTTGGCAGGCCATGCCGGAGAAGCGATCGCCCGTCTTGATGCACTCCTT GATGCCGGTGAGCCAGCACTTCGCATCGTGGCCACCTTGACAGGCCAAATCAGAGGGTGGCTTTGGGTGAGTTTACTGGA GCAGCAAGGGGAACGAGATGTGAACGTGATTGCCAAAGCAGCAGGCATTGGCAACCCCAAGCGGATCTACGTGATGCGCA AACAGCTACAGGGCCGGCCACCGCAGCGATTCCTCACCCTGCTCAGTCGCTTGCTTGAAGTAGAAGCCGCCCTCAAGCGA GGTGCAATCCCTACTGATGCCTTCCGCGACGGGTTACTCAGCACTCCCTAA
Upstream 100 bases:
>100_bases CTTTCCGTGAAGATCGGATGATCAAGCGACTTCACGTTTCTGCCTTAAGCCAGATAGACATCAAGCATCATCAGTTAAAG ATCTTCGGTCTGCCGCTGCA
Downstream 100 bases:
>100_bases TCCAGTGACGACACGCTGAAATAATCAGAACGTGTGTCAAAGGCATGGATGGCGTTGCTGGTGCAAAAATTCGGCGGATC ATCCGTCGGCAACGTCGAGC
Product: DNA polymerase III subunit delta
Products: diphosphate; DNAn+1
Alternate protein names: DNA Polymerase III Delta Subunit
Number of amino acids: Translated: 336; Mature: 335
Protein sequence:
>336_residues MPIHLIWGDDAAARDHAIETLIGDVVDQAWSSINLSRLDGADAGQASQALAEARTPPFGSGGRLVLLQRSPFCNACPSEL ANRFEDVLDLIPETSHLVLCNPNKPDGRLRTTKALQKLVKLKQASEKSFLLPAIWDGAGQQELVERTARDLGLQLEPEAT AALVEAIGNDSTRLTAELQKLALHADIRQESATENQSPTLIKAENVAALIEGMATNALQVGDSLLAGHAGEAIARLDALL DAGEPALRIVATLTGQIRGWLWVSLLEQQGERDVNVIAKAAGIGNPKRIYVMRKQLQGRPPQRFLTLLSRLLEVEAALKR GAIPTDAFRDGLLSTP
Sequences:
>Translated_336_residues MPIHLIWGDDAAARDHAIETLIGDVVDQAWSSINLSRLDGADAGQASQALAEARTPPFGSGGRLVLLQRSPFCNACPSEL ANRFEDVLDLIPETSHLVLCNPNKPDGRLRTTKALQKLVKLKQASEKSFLLPAIWDGAGQQELVERTARDLGLQLEPEAT AALVEAIGNDSTRLTAELQKLALHADIRQESATENQSPTLIKAENVAALIEGMATNALQVGDSLLAGHAGEAIARLDALL DAGEPALRIVATLTGQIRGWLWVSLLEQQGERDVNVIAKAAGIGNPKRIYVMRKQLQGRPPQRFLTLLSRLLEVEAALKR GAIPTDAFRDGLLSTP >Mature_335_residues PIHLIWGDDAAARDHAIETLIGDVVDQAWSSINLSRLDGADAGQASQALAEARTPPFGSGGRLVLLQRSPFCNACPSELA NRFEDVLDLIPETSHLVLCNPNKPDGRLRTTKALQKLVKLKQASEKSFLLPAIWDGAGQQELVERTARDLGLQLEPEATA ALVEAIGNDSTRLTAELQKLALHADIRQESATENQSPTLIKAENVAALIEGMATNALQVGDSLLAGHAGEAIARLDALLD AGEPALRIVATLTGQIRGWLWVSLLEQQGERDVNVIAKAAGIGNPKRIYVMRKQLQGRPPQRFLTLLSRLLEVEAALKRG AIPTDAFRDGLLSTP
Specific function: Unknown
COG id: COG1466
COG function: function code L; DNA polymerase III, delta subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.7.7.7
Molecular weight: Translated: 36174; Mature: 36043
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIHLIWGDDAAARDHAIETLIGDVVDQAWSSINLSRLDGADAGQASQALAEARTPPFGS CCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCHHHHHHHHHCCCCCCC GGRLVLLQRSPFCNACPSELANRFEDVLDLIPETSHLVLCNPNKPDGRLRTTKALQKLVK CCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHH LKQASEKSFLLPAIWDGAGQQELVERTARDLGLQLEPEATAALVEAIGNDSTRLTAELQK HHHHCCCCEECHHHHCCCCHHHHHHHHHHHCCCEECCHHHHHHHHHHCCCCHHHHHHHHH LALHADIRQESATENQSPTLIKAENVAALIEGMATNALQVGDSLLAGHAGEAIARLDALL HHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH DAGEPALRIVATLTGQIRGWLWVSLLEQQGERDVNVIAKAAGIGNPKRIYVMRKQLQGRP HCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHEEHHHHCCCC PQRFLTLLSRLLEVEAALKRGAIPTDAFRDGLLSTP HHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCC >Mature Secondary Structure PIHLIWGDDAAARDHAIETLIGDVVDQAWSSINLSRLDGADAGQASQALAEARTPPFGS CEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCHHHHHHHHHCCCCCCC GGRLVLLQRSPFCNACPSELANRFEDVLDLIPETSHLVLCNPNKPDGRLRTTKALQKLVK CCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHH LKQASEKSFLLPAIWDGAGQQELVERTARDLGLQLEPEATAALVEAIGNDSTRLTAELQK HHHHCCCCEECHHHHCCCCHHHHHHHHHHHCCCEECCHHHHHHHHHHCCCCHHHHHHHHH LALHADIRQESATENQSPTLIKAENVAALIEGMATNALQVGDSLLAGHAGEAIARLDALL HHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH DAGEPALRIVATLTGQIRGWLWVSLLEQQGERDVNVIAKAAGIGNPKRIYVMRKQLQGRP HCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHEEHHHHCCCC PQRFLTLLSRLLEVEAALKRGAIPTDAFRDGLLSTP HHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: deoxynucleoside triphosphate; DNAn
Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA