| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33862312
Identifier: 33862312
GI number: 33862312
Start: 40618
End: 41133
Strand: Reverse
Name: 33862312
Synonym: PMT0039
Alternate gene names: NA
Gene position: 41133-40618 (Counterclockwise)
Preceding gene: 33862316
Following gene: 33862311
Centisome position: 1.71
GC content: 54.26
Gene sequence:
>516_bases ATGCCTTCTCTGGCAACGTTACTGATTTATCTCATGGCAGGAACAGCATTGGGTCTGCTGACATTGCGCACTGGCATTCC AGCAGCACCCCTTGCAGGTGCTCTTTTAGGTGCAGGGCTCGTGAGCATGACCGGTCGCCTTGATGTTGCTGAATGGCCCT CAGGAACACGCACCGCAATTGAAATCGCCATCGGCACGGTGATCGGTACCGGCCTGACCAAAAGCTCCCTAGGGGAGCTG CAAAACCTCTGGAAACCAGCCCTACTGATCACTCTGACCCTTGTACTTACTGGGATAGTGATCGGTCTTTGGAGCAGTCG ATTACTAGGTATTGACCCTGTGGTTTCTCTCCTCGGCGCTGCCCCAGGAGGCATCAGTGGCATGAGTCTGGTAGGTGCGG AATTCGGCGTCGGTGCTGCAGTCGCCACCCTGCATGCTGTGAGATTAATCACCGTACTTTTGGTACTACCGCTTCTGGTG AAGCTATTGGCCCCATTAGGACTCATTGATTCCTGA
Upstream 100 bases:
>100_bases CCCGATGACAACACATGAGGAATAAAGGCTCAAGTCATTAGGCAGATGGTGAGGAGAATCATTTGCGCTCAAAGTATCTG TACTGTTTCAAATCGATCCC
Downstream 100 bases:
>100_bases TTAAACCTGGACAGGACAGTTTCAATCGATAAGTTGATCAATACTGTGTTGACTTGCAAGCGATGAATCGAAATCGAAAT CGAGTTGCCCTTTCACTCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 171; Mature: 170
Protein sequence:
>171_residues MPSLATLLIYLMAGTALGLLTLRTGIPAAPLAGALLGAGLVSMTGRLDVAEWPSGTRTAIEIAIGTVIGTGLTKSSLGEL QNLWKPALLITLTLVLTGIVIGLWSSRLLGIDPVVSLLGAAPGGISGMSLVGAEFGVGAAVATLHAVRLITVLLVLPLLV KLLAPLGLIDS
Sequences:
>Translated_171_residues MPSLATLLIYLMAGTALGLLTLRTGIPAAPLAGALLGAGLVSMTGRLDVAEWPSGTRTAIEIAIGTVIGTGLTKSSLGEL QNLWKPALLITLTLVLTGIVIGLWSSRLLGIDPVVSLLGAAPGGISGMSLVGAEFGVGAAVATLHAVRLITVLLVLPLLV KLLAPLGLIDS >Mature_170_residues PSLATLLIYLMAGTALGLLTLRTGIPAAPLAGALLGAGLVSMTGRLDVAEWPSGTRTAIEIAIGTVIGTGLTKSSLGELQ NLWKPALLITLTLVLTGIVIGLWSSRLLGIDPVVSLLGAAPGGISGMSLVGAEFGVGAAVATLHAVRLITVLLVLPLLVK LLAPLGLIDS
Specific function: Unknown
COG id: COG3180
COG function: function code R; Putative ammonia monooxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17173; Mature: 17042
Theoretical pI: Translated: 9.22; Mature: 9.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSLATLLIYLMAGTALGLLTLRTGIPAAPLAGALLGAGLVSMTGRLDVAEWPSGTRTAI CCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHCCCCCCHHHH EIAIGTVIGTGLTKSSLGELQNLWKPALLITLTLVLTGIVIGLWSSRLLGIDPVVSLLGA HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCC APGGISGMSLVGAEFGVGAAVATLHAVRLITVLLVLPLLVKLLAPLGLIDS CCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure PSLATLLIYLMAGTALGLLTLRTGIPAAPLAGALLGAGLVSMTGRLDVAEWPSGTRTAI CHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHCCCCCCHHHH EIAIGTVIGTGLTKSSLGELQNLWKPALLITLTLVLTGIVIGLWSSRLLGIDPVVSLLGA HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCC APGGISGMSLVGAEFGVGAAVATLHAVRLITVLLVLPLLVKLLAPLGLIDS CCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA