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The map label for this gene is 33862309

Identifier: 33862309

GI number: 33862309

Start: 37596

End: 37997

Strand: Reverse

Name: 33862309

Synonym: PMT0036

Alternate gene names: NA

Gene position: 37997-37596 (Counterclockwise)

Preceding gene: 33862311

Following gene: 33862307

Centisome position: 1.58

GC content: 49.5

Gene sequence:

>402_bases
ATGCACAATAGGGACGCGGTTTTCCTCGAAGATCTCTGCCCCAAATTACGTGTGCGAAGATGGAGAAAATCCCTTCACAA
CTATACCGCTCAAAGTTGTATCTATTGCGGCAAACCTTCTGAATCAATTGACCATATTTTGCCTCGCAGTCGCGGTGGCT
TAAGTATTACTCAAAACTGCGTTCCAGCCTGTCTATCCTGTAACGGTCACAAATCAGATGCCGATGCCTTCGAGTGGTAT
AGGCGCCAACGTTTCTATGATCCGCGACGCGCAATGGCCATCCGCGCCTGGATGGATGGCGATCTCAGACTGGCTTTAAG
GCTGCTTCAATGGACCCAAACCAACCATAGAGAAGCTCCTGTTATCAGCCAAGATGAAGAATGGATGCCCCAGCTGGCCT
AA

Upstream 100 bases:

>100_bases
AACCACTGTAAAAAGCAGCGCAAAGCAAGTCAAAATAGATATTTAGACACATTGACTCAAAGAGCATGCGCGGCACACTT
CACAAAACCGAGAAACTCAG

Downstream 100 bases:

>100_bases
ACCAATCTCACCAGACCTGACAGGCCACCACAGGGTGATGTCTTTGGCAAATAGAAGCCTGCTGCTCAGGTTGCTCCGGA
GCCAGAAGCATCGCACCTGT

Product: HNH endonuclease:HNH nuclease

Products: NA

Alternate protein names: HNH Nuclease; McrA/HNH Family Nuclease

Number of amino acids: Translated: 133; Mature: 133

Protein sequence:

>133_residues
MHNRDAVFLEDLCPKLRVRRWRKSLHNYTAQSCIYCGKPSESIDHILPRSRGGLSITQNCVPACLSCNGHKSDADAFEWY
RRQRFYDPRRAMAIRAWMDGDLRLALRLLQWTQTNHREAPVISQDEEWMPQLA

Sequences:

>Translated_133_residues
MHNRDAVFLEDLCPKLRVRRWRKSLHNYTAQSCIYCGKPSESIDHILPRSRGGLSITQNCVPACLSCNGHKSDADAFEWY
RRQRFYDPRRAMAIRAWMDGDLRLALRLLQWTQTNHREAPVISQDEEWMPQLA
>Mature_133_residues
MHNRDAVFLEDLCPKLRVRRWRKSLHNYTAQSCIYCGKPSESIDHILPRSRGGLSITQNCVPACLSCNGHKSDADAFEWY
RRQRFYDPRRAMAIRAWMDGDLRLALRLLQWTQTNHREAPVISQDEEWMPQLA

Specific function: Unknown

COG id: COG1403

COG function: function code V; Restriction endonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15644; Mature: 15644

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
4.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHNRDAVFLEDLCPKLRVRRWRKSLHNYTAQSCIYCGKPSESIDHILPRSRGGLSITQNC
CCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHCCCCCCCCCHHHHH
VPACLSCNGHKSDADAFEWYRRQRFYDPRRAMAIRAWMDGDLRLALRLLQWTQTNHREAP
HHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCC
VISQDEEWMPQLA
CCCCCHHCCCCCC
>Mature Secondary Structure
MHNRDAVFLEDLCPKLRVRRWRKSLHNYTAQSCIYCGKPSESIDHILPRSRGGLSITQNC
CCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHCCCCCCCCCHHHHH
VPACLSCNGHKSDADAFEWYRRQRFYDPRRAMAIRAWMDGDLRLALRLLQWTQTNHREAP
HHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCC
VISQDEEWMPQLA
CCCCCHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA