| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33862307
Identifier: 33862307
GI number: 33862307
Start: 36414
End: 37334
Strand: Reverse
Name: 33862307
Synonym: PMT0034
Alternate gene names: NA
Gene position: 37334-36414 (Counterclockwise)
Preceding gene: 33862309
Following gene: 33862306
Centisome position: 1.55
GC content: 53.31
Gene sequence:
>921_bases ATGCTCACAGAGCTTGTCAAGCGGAGTCCGCCTCTCCCCACCGGCTCAAAGTTGCTGGTTCTCGGTGGAGGATTCAGTGG CCAGCATGTAGTGGCTCTGGCGAGAGCACTTGGCAGCACTGCTATCTGCAGCCGCAGAGACATCAACAGCCCAGACGCAG ACATCGCATTTGATAGTGCCACCAAGCTGTTGCCAGCCACAAAAGTTCTAGAAGGAGTCACGCATTTACTCAGCTGCATA CCGCCAGCAGCCGATGGGAAAGATCCAGTACTGACATGCTTGGGCGACCAGCTCAGAGCGTTGCCATTGCAATGGGTTGG CTATCTCTCCACCACAGGGGTTTACGGAGATCGCCAAGGACGCTGGGTCACAGAAATCGATCACCCTCAGCCTCAACAAG CACGGAGCAAAAGAAGATTGGCCTGTGAAGAGGCCTGGCAAGCTTCGGGATTACCCCTGCAGATTCTGCGACTGCCTGGC ATCTACGGACCAGGCCGCTCAGTGCTTAAAAACGTCAACACAGGTCAAAGCAGAATGATCCATAAGCCCAACCAAGTGTT TTCAAGAATTCATGTCGATGACATTGCAGGCGCCATCCTGCACCTAATCCAATGCGCTGCTGATGGACAGCGACCCATCG TGATCAACGTCACCGATGACCTGCCAACAGCTTATACAGACGTACTCGGGTTCGCCGCCCAACTACTTGGAAAGTCCTTA CCCGAAATTGAGCCATTTGCAGTTGCCGCTGCACAGATGAATCCCATGGCACTCTCCTTCTGGCAAGAGAATCGCAGGGT CAGCAATCAGCTCTTATGCCGCGAGCTTGGCTATTCCCTGATGCATCCCAACTATCAATCCGGCCTTAGAGACTGTTATC TGGCAGAAGGTTTCAAGGTCTCACAGACGAATTTTCCTTAG
Upstream 100 bases:
>100_bases CTTGGACATGCCCGACGCGGCAGCATGGACACTGAAATCGCGGAAGCGCGCAAATAGGAGCTCGCCATGACCAAACCCAG AATATAATACATTTGTACTC
Downstream 100 bases:
>100_bases TTGTTGAACGTTCCCGATCCGGACCACCAAGAATGAACTCGTTCCAATTAAAGGGCTTCTCTGGATCGATAAATGTCAAC CCGGCATCGCGCAAAAACTG
Product: hypothetical protein
Products: NA
Alternate protein names: Nucleoside-Diphosphate-Sugar Epimerase; Nucleoside-Diphosphate-Sugar Epimerases; Nucleoside-Diphosphate-Sugar Epimerase Protein; NAD Dependent Epimerase/Dehydratase; Oxidoreductase Protein; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase; NAD-Dependent Epimerase/Dehydratase Family Protein; NAD Dependent Epimerase/Dehydratase Family; NAD Dependent Epimerase/Dehydratase Family Protein; ActC Family Protein; Epimerase; Actc Protein; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase Family; Oxidoreductase; Phosphate ABC Transporter Permease; Ketopantoate Reductase ApbA/PanE Domain Protein; NAD Epimerase/Dehydratase Protein; NAD-Dependent Epimerase
Number of amino acids: Translated: 306; Mature: 306
Protein sequence:
>306_residues MLTELVKRSPPLPTGSKLLVLGGGFSGQHVVALARALGSTAICSRRDINSPDADIAFDSATKLLPATKVLEGVTHLLSCI PPAADGKDPVLTCLGDQLRALPLQWVGYLSTTGVYGDRQGRWVTEIDHPQPQQARSKRRLACEEAWQASGLPLQILRLPG IYGPGRSVLKNVNTGQSRMIHKPNQVFSRIHVDDIAGAILHLIQCAADGQRPIVINVTDDLPTAYTDVLGFAAQLLGKSL PEIEPFAVAAAQMNPMALSFWQENRRVSNQLLCRELGYSLMHPNYQSGLRDCYLAEGFKVSQTNFP
Sequences:
>Translated_306_residues MLTELVKRSPPLPTGSKLLVLGGGFSGQHVVALARALGSTAICSRRDINSPDADIAFDSATKLLPATKVLEGVTHLLSCI PPAADGKDPVLTCLGDQLRALPLQWVGYLSTTGVYGDRQGRWVTEIDHPQPQQARSKRRLACEEAWQASGLPLQILRLPG IYGPGRSVLKNVNTGQSRMIHKPNQVFSRIHVDDIAGAILHLIQCAADGQRPIVINVTDDLPTAYTDVLGFAAQLLGKSL PEIEPFAVAAAQMNPMALSFWQENRRVSNQLLCRELGYSLMHPNYQSGLRDCYLAEGFKVSQTNFP >Mature_306_residues MLTELVKRSPPLPTGSKLLVLGGGFSGQHVVALARALGSTAICSRRDINSPDADIAFDSATKLLPATKVLEGVTHLLSCI PPAADGKDPVLTCLGDQLRALPLQWVGYLSTTGVYGDRQGRWVTEIDHPQPQQARSKRRLACEEAWQASGLPLQILRLPG IYGPGRSVLKNVNTGQSRMIHKPNQVFSRIHVDDIAGAILHLIQCAADGQRPIVINVTDDLPTAYTDVLGFAAQLLGKSL PEIEPFAVAAAQMNPMALSFWQENRRVSNQLLCRELGYSLMHPNYQSGLRDCYLAEGFKVSQTNFP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33283; Mature: 33283
Theoretical pI: Translated: 8.28; Mature: 8.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTELVKRSPPLPTGSKLLVLGGGFSGQHVVALARALGSTAICSRRDINSPDADIAFDSA CCHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCHHHHCCCCCCCCCCCEECCCH TKLLPATKVLEGVTHLLSCIPPAADGKDPVLTCLGDQLRALPLQWVGYLSTTGVYGDRQG HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC RWVTEIDHPQPQQARSKRRLACEEAWQASGLPLQILRLPGIYGPGRSVLKNVNTGQSRMI CEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHCCCCCHHHHC HKPNQVFSRIHVDDIAGAILHLIQCAADGQRPIVINVTDDLPTAYTDVLGFAAQLLGKSL CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCC PEIEPFAVAAAQMNPMALSFWQENRRVSNQLLCRELGYSLMHPNYQSGLRDCYLAEGFKV CCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCHHHCCCCHHHHHHHHHHHCCEEE SQTNFP CCCCCC >Mature Secondary Structure MLTELVKRSPPLPTGSKLLVLGGGFSGQHVVALARALGSTAICSRRDINSPDADIAFDSA CCHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCHHHHCCCCCCCCCCCEECCCH TKLLPATKVLEGVTHLLSCIPPAADGKDPVLTCLGDQLRALPLQWVGYLSTTGVYGDRQG HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC RWVTEIDHPQPQQARSKRRLACEEAWQASGLPLQILRLPGIYGPGRSVLKNVNTGQSRMI CEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHCCCCCHHHHC HKPNQVFSRIHVDDIAGAILHLIQCAADGQRPIVINVTDDLPTAYTDVLGFAAQLLGKSL CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCC PEIEPFAVAAAQMNPMALSFWQENRRVSNQLLCRELGYSLMHPNYQSGLRDCYLAEGFKV CCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCHHHCCCCHHHHHHHHHHHCCEEE SQTNFP CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA