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The map label for this gene is ppiA [C]

Identifier: 33862303

GI number: 33862303

Start: 32997

End: 34079

Strand: Reverse

Name: ppiA [C]

Synonym: PMT0030

Alternate gene names: 33862303

Gene position: 34079-32997 (Counterclockwise)

Preceding gene: 33862306

Following gene: 33862302

Centisome position: 1.41

GC content: 49.68

Gene sequence:

>1083_bases
ATGCCAAATACTCCTCTACTGACCAGCCTGATCACAGTGCTCGCAGTACTTTTACTGAATTGGGGTGATCCTGTTCTGGC
TGCTCTGCCAGCTGGAAGTGCAGTGACCGATGGTGCCGCAATCCTGCGAAATGCCCTACCAATCGAACAAAAAGATCTCC
GCCAAATGCAAGCCACCCTTGAGGCCACTAGCAAAGTGGTTGGGTCTTCAAAGGGCAATCGCTGGGTTGCGCTAAACGAA
GCTGCTTCTTCTAGTCAGTTCCTAGTAATAACCCGCAAAAAGAGCATCCTCGCAGCCATCCCAGAAGCATCTCGAGAAAA
GGGTGAAGCACTTTTGGAATCCTTGGGAAAAACGGTCCAGGCCCTGGGGGATGCAGCCAGTAATCAAAACGTAGATCGCT
TCATCGACCTACGTCGCGAAAGTCTCAAGCAGATCGGTGATCTAGAAGCGCTATTGGTGAATGATTTTCCTTACACCATC
CCTGAGGAATTCAACTCACTACCGCGGCTTCTCGGAAGAGCAACTGTATCGATCAAAACCACAAAAGGGAACATCACTGC
TGTGATTGATGGCTACAACGCCCCTCTAACAGCCGGCGCCTTCGTAGACCTAGCTCTCAAAGGCTTTTATGACGGATTGC
CATTCACACGCGCTGAAGACAATTACGTACTACAAAGCGGTGACCCCACAGGACCTGAAAGCGGATACATCGACCCAACA
ACCAAGAAAGAACGTCAAGTTCCTCTGGAAATCCGTATTCCAGAGGAACCAACTCCTTTTTACAACCAAACCTTTGAAGA
CATCGGTCTTTACAAAGCCACACCAGTCCTTCCATTCGCCGCCCTTGGCACACTCGGATGGGCCCATTCCGACCAGGCTA
TAGACGACGGTTCCTCCCAGTTCTTTCTATTTCTCTATGATGCAGAATTAACTCCAGCTGGTCTCAACTTGGTGGATGGC
CGCAATGCAGCCTTTGGCTATGTCGTTGAAGGTACCGAGTTACTTAAAAAACTCGAAATTGGTGATCAAATCTTATCCAT
CAAAGTTGTCGATGGAGCTGATCGGCTGAAGCCCCACGCCTGA

Upstream 100 bases:

>100_bases
GAGGTGCCAGTGCGGAAGTCGTTACTTGAGATCATTCCCGCTGAACGGATCAGATGGATCATACGGCTGTGCCAAAGTCC
CAGCACAAGAAGAGTTCCAC

Downstream 100 bases:

>100_bases
GGACTTGTGTATGGGCGAAACCCTAGCCCAACTTGGTGAAAACGAACTACTGCATCGACTAGCCCGCTTTGCTCCTGCTG
GCCAACTTGACGACGACACA

Product: cyclophilin-type peptidyl-prolyl cis-trans isomerase

Products: NA

Alternate protein names: Putative thylakoid lumen PPIase; Putative thylakoid lumen rotamase [H]

Number of amino acids: Translated: 360; Mature: 359

Protein sequence:

>360_residues
MPNTPLLTSLITVLAVLLLNWGDPVLAALPAGSAVTDGAAILRNALPIEQKDLRQMQATLEATSKVVGSSKGNRWVALNE
AASSSQFLVITRKKSILAAIPEASREKGEALLESLGKTVQALGDAASNQNVDRFIDLRRESLKQIGDLEALLVNDFPYTI
PEEFNSLPRLLGRATVSIKTTKGNITAVIDGYNAPLTAGAFVDLALKGFYDGLPFTRAEDNYVLQSGDPTGPESGYIDPT
TKKERQVPLEIRIPEEPTPFYNQTFEDIGLYKATPVLPFAALGTLGWAHSDQAIDDGSSQFFLFLYDAELTPAGLNLVDG
RNAAFGYVVEGTELLKKLEIGDQILSIKVVDGADRLKPHA

Sequences:

>Translated_360_residues
MPNTPLLTSLITVLAVLLLNWGDPVLAALPAGSAVTDGAAILRNALPIEQKDLRQMQATLEATSKVVGSSKGNRWVALNE
AASSSQFLVITRKKSILAAIPEASREKGEALLESLGKTVQALGDAASNQNVDRFIDLRRESLKQIGDLEALLVNDFPYTI
PEEFNSLPRLLGRATVSIKTTKGNITAVIDGYNAPLTAGAFVDLALKGFYDGLPFTRAEDNYVLQSGDPTGPESGYIDPT
TKKERQVPLEIRIPEEPTPFYNQTFEDIGLYKATPVLPFAALGTLGWAHSDQAIDDGSSQFFLFLYDAELTPAGLNLVDG
RNAAFGYVVEGTELLKKLEIGDQILSIKVVDGADRLKPHA
>Mature_359_residues
PNTPLLTSLITVLAVLLLNWGDPVLAALPAGSAVTDGAAILRNALPIEQKDLRQMQATLEATSKVVGSSKGNRWVALNEA
ASSSQFLVITRKKSILAAIPEASREKGEALLESLGKTVQALGDAASNQNVDRFIDLRRESLKQIGDLEALLVNDFPYTIP
EEFNSLPRLLGRATVSIKTTKGNITAVIDGYNAPLTAGAFVDLALKGFYDGLPFTRAEDNYVLQSGDPTGPESGYIDPTT
KKERQVPLEIRIPEEPTPFYNQTFEDIGLYKATPVLPFAALGTLGWAHSDQAIDDGSSQFFLFLYDAELTPAGLNLVDGR
NAAFGYVVEGTELLKKLEIGDQILSIKVVDGADRLKPHA

Specific function: PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. Required for the assembly and stabilization of PSII [H]

COG id: COG0652

COG function: function code O; Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family

Gene ontology:

Cell location: Cellular thylakoid lumen (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PPIase cyclophilin-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015891
- InterPro:   IPR002130
- InterPro:   IPR023222 [H]

Pfam domain/function: PF00160 Pro_isomerase [H]

EC number: =5.2.1.8 [H]

Molecular weight: Translated: 38795; Mature: 38663

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: PS50072 CSA_PPIASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNTPLLTSLITVLAVLLLNWGDPVLAALPAGSAVTDGAAILRNALPIEQKDLRQMQATL
CCCCHHHHHHHHHHHHHHHCCCCHHEEECCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHH
EATSKVVGSSKGNRWVALNEAASSSQFLVITRKKSILAAIPEASREKGEALLESLGKTVQ
HHHHHHHCCCCCCEEEEEECCCCCCEEEEEEECCHHHHCCCCHHHHHHHHHHHHHHHHHH
ALGDAASNQNVDRFIDLRRESLKQIGDLEALLVNDFPYTIPEEFNSLPRLLGRATVSIKT
HHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHCCEEEEEEE
TKGNITAVIDGYNAPLTAGAFVDLALKGFYDGLPFTRAEDNYVLQSGDPTGPESGYIDPT
ECCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCC
TKKERQVPLEIRIPEEPTPFYNQTFEDIGLYKATPVLPFAALGTLGWAHSDQAIDDGSSQ
CCCCCCCCEEEECCCCCCCHHHCCHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCE
FFLFLYDAELTPAGLNLVDGRNAAFGYVVEGTELLKKLEIGDQILSIKVVDGADRLKPHA
EEEEEEECCCCCCCCEEECCCCCEEEEEECHHHHHHHHHCCCEEEEEEEECCHHHCCCCC
>Mature Secondary Structure 
PNTPLLTSLITVLAVLLLNWGDPVLAALPAGSAVTDGAAILRNALPIEQKDLRQMQATL
CCCHHHHHHHHHHHHHHHCCCCHHEEECCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHH
EATSKVVGSSKGNRWVALNEAASSSQFLVITRKKSILAAIPEASREKGEALLESLGKTVQ
HHHHHHHCCCCCCEEEEEECCCCCCEEEEEEECCHHHHCCCCHHHHHHHHHHHHHHHHHH
ALGDAASNQNVDRFIDLRRESLKQIGDLEALLVNDFPYTIPEEFNSLPRLLGRATVSIKT
HHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHCCEEEEEEE
TKGNITAVIDGYNAPLTAGAFVDLALKGFYDGLPFTRAEDNYVLQSGDPTGPESGYIDPT
ECCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCC
TKKERQVPLEIRIPEEPTPFYNQTFEDIGLYKATPVLPFAALGTLGWAHSDQAIDDGSSQ
CCCCCCCCEEEECCCCCCCHHHCCHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCE
FFLFLYDAELTPAGLNLVDGRNAAFGYVVEGTELLKKLEIGDQILSIKVVDGADRLKPHA
EEEEEEECCCCCCCCEEECCCCCEEEEEECHHHHHHHHHCCCEEEEEEEECCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]