| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is thiL [H]
Identifier: 33862302
GI number: 33862302
Start: 32003
End: 32986
Strand: Reverse
Name: thiL [H]
Synonym: PMT0029
Alternate gene names: 33862302
Gene position: 32986-32003 (Counterclockwise)
Preceding gene: 33862303
Following gene: 33862300
Centisome position: 1.37
GC content: 54.67
Gene sequence:
>984_bases ATGGGCGAAACCCTAGCCCAACTTGGTGAAAACGAACTACTGCATCGACTAGCCCGCTTTGCTCCTGCTGGCCAACTTGA CGACGACACAGCGCAAGTCCACACCAATGAGGGAGAACTCCTCATTAATACCGATGTCATGGTGGAAGGCATTCACTTCA GCGAAGACACCACGACTCCAAAAGATGTTGGTTGGCGTTGCGTAACCGCCAACCTTTCCGACCTAGCAGCCAGTGGCGTT GATCAGATTCTGGGTATCACTGTCGGACTTGTAGTCCCTCCAGAGACCCCCTGGGACTGGGTAGAGAAGGTTTATTTAGG CATAGAAGCCGCATTGAAACAGTTTGGGGGGACCTTGCTGGGCGGCGACTGTTCCCGAGGGGATCAACGACTACTCGCAA TCACCGCCCTGGGCACTCTCGGGCCAGTACGGTTGCACCGCTCCCAAGCCCAACCTGGAGATTCTCTTGTCGTCAGTGGT CCCCATGGCCTCAGCCGTCTTGGCCTGGCCCTACTTCGCTCAGATCCACTGATAGAAGCAGCCCTGCTGCCAGACAAACT CAAACAAAAAGCGATAGAAGCTCATCAACACCCTCAACCATGCCTGAAGGCACTCCACGCTCTTCAAACCTGTAAGCCTG CTGAACTTCCATGGCGAGCTGGGGGCACCGACAGTAGTGACGGACTTCTGGCAGCGGTTCAAGGCCTTTGCAGAAGCAGC GGTTGCCGGGCGATTCTTGATCCAACAGGCCTACCCAAAGACCCTGACTGGCCACTAGGCCAACACTGGGATAGCTGGTG CCTAAATGGCGGAGAAGACTTTGAACTTATTCTCAGCCTGCCACCGAAATGGGCCACCGCTTGGCTGCAAGTTCTTCCAT CAAGCCAAATCATTGGTGTCATGGAACAAGGCCCACCTCGGGTGGAATGGGCGCATGGCAAAGGAGAAGTGAGCAACTTC TCAAGCTTCAAACATTTCCAATAA
Upstream 100 bases:
>100_bases ACCGAGTTACTTAAAAAACTCGAAATTGGTGATCAAATCTTATCCATCAAAGTTGTCGATGGAGCTGATCGGCTGAAGCC CCACGCCTGAGGACTTGTGT
Downstream 100 bases:
>100_bases AGAAACAGAATAAACCCCTCGCTAATAGGAGGGGTTTATAACTCAAAAAGAAGCTAGAAGCTCAGAAAGTAGTAATCCTC TGAAAGATCACTTCCAATTC
Product: thiamine monophosphate kinase
Products: NA
Alternate protein names: Thiamine-phosphate kinase [H]
Number of amino acids: Translated: 327; Mature: 326
Protein sequence:
>327_residues MGETLAQLGENELLHRLARFAPAGQLDDDTAQVHTNEGELLINTDVMVEGIHFSEDTTTPKDVGWRCVTANLSDLAASGV DQILGITVGLVVPPETPWDWVEKVYLGIEAALKQFGGTLLGGDCSRGDQRLLAITALGTLGPVRLHRSQAQPGDSLVVSG PHGLSRLGLALLRSDPLIEAALLPDKLKQKAIEAHQHPQPCLKALHALQTCKPAELPWRAGGTDSSDGLLAAVQGLCRSS GCRAILDPTGLPKDPDWPLGQHWDSWCLNGGEDFELILSLPPKWATAWLQVLPSSQIIGVMEQGPPRVEWAHGKGEVSNF SSFKHFQ
Sequences:
>Translated_327_residues MGETLAQLGENELLHRLARFAPAGQLDDDTAQVHTNEGELLINTDVMVEGIHFSEDTTTPKDVGWRCVTANLSDLAASGV DQILGITVGLVVPPETPWDWVEKVYLGIEAALKQFGGTLLGGDCSRGDQRLLAITALGTLGPVRLHRSQAQPGDSLVVSG PHGLSRLGLALLRSDPLIEAALLPDKLKQKAIEAHQHPQPCLKALHALQTCKPAELPWRAGGTDSSDGLLAAVQGLCRSS GCRAILDPTGLPKDPDWPLGQHWDSWCLNGGEDFELILSLPPKWATAWLQVLPSSQIIGVMEQGPPRVEWAHGKGEVSNF SSFKHFQ >Mature_326_residues GETLAQLGENELLHRLARFAPAGQLDDDTAQVHTNEGELLINTDVMVEGIHFSEDTTTPKDVGWRCVTANLSDLAASGVD QILGITVGLVVPPETPWDWVEKVYLGIEAALKQFGGTLLGGDCSRGDQRLLAITALGTLGPVRLHRSQAQPGDSLVVSGP HGLSRLGLALLRSDPLIEAALLPDKLKQKAIEAHQHPQPCLKALHALQTCKPAELPWRAGGTDSSDGLLAAVQGLCRSSG CRAILDPTGLPKDPDWPLGQHWDSWCLNGGEDFELILSLPPKWATAWLQVLPSSQIIGVMEQGPPRVEWAHGKGEVSNFS SFKHFQ
Specific function: Thiamine biosynthesis. [C]
COG id: COG0611
COG function: function code H; Thiamine monophosphate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thiamine-monophosphate kinase family [H]
Homologues:
Organism=Escherichia coli, GI1786619, Length=286, Percent_Identity=31.8181818181818, Blast_Score=96, Evalue=3e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000728 - InterPro: IPR010918 - InterPro: IPR016188 - InterPro: IPR006283 [H]
Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]
EC number: =2.7.4.16 [H]
Molecular weight: Translated: 35182; Mature: 35051
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGETLAQLGENELLHRLARFAPAGQLDDDTAQVHTNEGELLINTDVMVEGIHFSEDTTTP CCHHHHHHCHHHHHHHHHHHCCCCCCCCCCCEEECCCCCEEEECCEEEEEEEECCCCCCC KDVGWRCVTANLSDLAASGVDQILGITVGLVVPPETPWDWVEKVYLGIEAALKQFGGTLL HHCCCEEEECCHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHCCEEE GGDCSRGDQRLLAITALGTLGPVRLHRSQAQPGDSLVVSGPHGLSRLGLALLRSDPLIEA CCCCCCCCCEEEEEEECCCCCHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHCCCCHHH ALLPDKLKQKAIEAHQHPQPCLKALHALQTCKPAELPWRAGGTDSSDGLLAAVQGLCRSS HHCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC GCRAILDPTGLPKDPDWPLGQHWDSWCLNGGEDFELILSLPPKWATAWLQVLPSSQIIGV CCCEEECCCCCCCCCCCCCCCCCHHHHCCCCCCEEEEEECCCHHHHHHHHHCCCCCEEEE MEQGPPRVEWAHGKGEVSNFSSFKHFQ CCCCCCCEEEECCCCCCCCCCCCCCCC >Mature Secondary Structure GETLAQLGENELLHRLARFAPAGQLDDDTAQVHTNEGELLINTDVMVEGIHFSEDTTTP CHHHHHHCHHHHHHHHHHHCCCCCCCCCCCEEECCCCCEEEECCEEEEEEEECCCCCCC KDVGWRCVTANLSDLAASGVDQILGITVGLVVPPETPWDWVEKVYLGIEAALKQFGGTLL HHCCCEEEECCHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHCCEEE GGDCSRGDQRLLAITALGTLGPVRLHRSQAQPGDSLVVSGPHGLSRLGLALLRSDPLIEA CCCCCCCCCEEEEEEECCCCCHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHCCCCHHH ALLPDKLKQKAIEAHQHPQPCLKALHALQTCKPAELPWRAGGTDSSDGLLAAVQGLCRSS HHCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC GCRAILDPTGLPKDPDWPLGQHWDSWCLNGGEDFELILSLPPKWATAWLQVLPSSQIIGV CCCEEECCCCCCCCCCCCCCCCCHHHHCCCCCCEEEEEECCCHHHHHHHHHCCCCCEEEE MEQGPPRVEWAHGKGEVSNFSSFKHFQ CCCCCCCEEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA