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The map label for this gene is yiaM [C]

Identifier: 32267368

GI number: 32267368

Start: 1789585

End: 1790202

Strand: Direct

Name: yiaM [C]

Synonym: HH1869

Alternate gene names: 32267368

Gene position: 1789585-1790202 (Clockwise)

Preceding gene: 32267367

Following gene: 32267369

Centisome position: 99.47

GC content: 34.95

Gene sequence:

>618_bases
ATGTTTTCTTGGATTACTAAACCATTTGTATGGGCACATCATAACCCACGCATTCTTAAAATTTTTGCCATTTTAGATAA
AATTATTGCCTCTATAAATAAAAACATTGCCGTAATTGGCTTAGTTGTAGGGGTGCTTATTACTGCTTTAAATGTATTTT
GCCGTTATCTCACTGGATTATTTCCAGATTTTATCCACCTCTCACTGACTTGGGCAGAAGAAATTGCACGATATTGTTTT
TTGTGGTCAGCTCTTTTTGGTGCAGCATATGGATTTAGAAAAGGCGTACATATCAGTGTTACTATGCTTCTTGAGCGTTT
TCCTCCTCAATATGCTAAAGCTTGTGTGCTTGGTATACATACGCTTAATGCAATCTTTCTTGCTTTTATGACATATGCCG
GAGCTATGGTATGTTACGATAATTATATTCTTGGTTATATGAGCGAAGCTCTGCATAATGTCCCTTTATGGATTTTTTTG
CTTTGTCTGCCTTTTGCTTTTTTTGGTGCAACTTACCGTTGTATTGAAAAAATCTATGAAGTCTCTTGGATGGAAGCAGA
CAAAGTAATTAAAAATGCCGAAAATGAAATGATACACGATTCTGTGATTAAAGATTAA

Upstream 100 bases:

>100_bases
AAGAAACTATGCAGACTATTTATCCCAAGTTTTATAATATAGTTGGGCAAGATTTGATTGAAAAAATTATACAAGTGCAA
TAATTTGCGGAGGAAACTTG

Downstream 100 bases:

>100_bases
TGGAGTATTAATGAGTGTTGCATATCTAATGGTTGCTTTATTTGGTTTATTGCTTTTAGGTGTTCCTGTTTCGGTTGCTT
TAGGCATAAGCGCAATTAGT

Product: hypothetical protein

Products: NA

Alternate protein names: C4-Dicarboxylate Transport System Permease Small Subunit; Transcriptional Regulator; ArsR Family Transcriptional Regulator; TRAP Transporter DctQ-Like Membrane Protein; TRAP Dicarboxylate Family Transporter DctQ Subunit; C4-Dicarboxylate Transporter Small Subunit; Tripartite ATP-Independent Periplasmic Transporter

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MFSWITKPFVWAHHNPRILKIFAILDKIIASINKNIAVIGLVVGVLITALNVFCRYLTGLFPDFIHLSLTWAEEIARYCF
LWSALFGAAYGFRKGVHISVTMLLERFPPQYAKACVLGIHTLNAIFLAFMTYAGAMVCYDNYILGYMSEALHNVPLWIFL
LCLPFAFFGATYRCIEKIYEVSWMEADKVIKNAENEMIHDSVIKD

Sequences:

>Translated_205_residues
MFSWITKPFVWAHHNPRILKIFAILDKIIASINKNIAVIGLVVGVLITALNVFCRYLTGLFPDFIHLSLTWAEEIARYCF
LWSALFGAAYGFRKGVHISVTMLLERFPPQYAKACVLGIHTLNAIFLAFMTYAGAMVCYDNYILGYMSEALHNVPLWIFL
LCLPFAFFGATYRCIEKIYEVSWMEADKVIKNAENEMIHDSVIKD
>Mature_205_residues
MFSWITKPFVWAHHNPRILKIFAILDKIIASINKNIAVIGLVVGVLITALNVFCRYLTGLFPDFIHLSLTWAEEIARYCF
LWSALFGAAYGFRKGVHISVTMLLERFPPQYAKACVLGIHTLNAIFLAFMTYAGAMVCYDNYILGYMSEALHNVPLWIFL
LCLPFAFFGATYRCIEKIYEVSWMEADKVIKNAENEMIHDSVIKD

Specific function: Unknown

COG id: COG3090

COG function: function code G; TRAP-type C4-dicarboxylate transport system, small permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23461; Mature: 23461

Theoretical pI: Translated: 7.85; Mature: 7.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSWITKPFVWAHHNPRILKIFAILDKIIASINKNIAVIGLVVGVLITALNVFCRYLTGL
CCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
FPDFIHLSLTWAEEIARYCFLWSALFGAAYGFRKGVHISVTMLLERFPPQYAKACVLGIH
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHH
TLNAIFLAFMTYAGAMVCYDNYILGYMSEALHNVPLWIFLLCLPFAFFGATYRCIEKIYE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VSWMEADKVIKNAENEMIHDSVIKD
HHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFSWITKPFVWAHHNPRILKIFAILDKIIASINKNIAVIGLVVGVLITALNVFCRYLTGL
CCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
FPDFIHLSLTWAEEIARYCFLWSALFGAAYGFRKGVHISVTMLLERFPPQYAKACVLGIH
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHH
TLNAIFLAFMTYAGAMVCYDNYILGYMSEALHNVPLWIFLLCLPFAFFGATYRCIEKIYE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VSWMEADKVIKNAENEMIHDSVIKD
HHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA