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The map label for this gene is ddpX [H]

Identifier: 32267354

GI number: 32267354

Start: 1776997

End: 1777635

Strand: Direct

Name: ddpX [H]

Synonym: HH1855

Alternate gene names: 32267354

Gene position: 1776997-1777635 (Clockwise)

Preceding gene: 32267353

Following gene: 32267360

Centisome position: 98.77

GC content: 37.72

Gene sequence:

>639_bases
ATGAAACTTGCCTTGCTTTTAATTATAATTATATGTAGCTTTGCGCAAGGCAAAGATTCTCTAATTGAAGATAAAATGCG
TAATATTGGGCTTTTTGCACTTGAAGAAATAGATAAAGATACTTTTATCACGCGGCTTGCTTATGATAGTAAAGAAAACT
TTATGAAAACAAATATCTATGCACCTTTTTCTTTACACAAATGCTATCTCCATAAAGATATGAAAGAGCATATGCAAAAA
CTTGCCAAGATTCTAAAAGCAAAGAATTTAAAGCTTATTGTGTATGATTGTTTCCGTCCACAAGCTGCACAAGAGCTTGC
TTGGAGTATTGTGCCTGATACGCGCTATGTCGCTCACCCAAAGAAAGGCTCAAATCACTCAAGGGGGATTGCCATTGATG
TGGGCTTAGCTCAAGGAAATGGAGAAGCTTTAAGTATGCCAAGCGCATTTGATGAATTTAGTGCAAAAGCGTGGCGTGAT
TATATGTGTCCGCAATCTCGAACACAAAATTGCACTCATCGTAACGAACTCCAAGAGATAATGAGCCAAGCTGGATTAAA
GAGTATAAAAACAGAATGGTGGCACTTTGAGCTTCCTATAAGCAATAAACACGGCTACCCTATTCTTTCTCTCCCATAG

Upstream 100 bases:

>100_bases
GAATTTTTTACATAAAAATGGAGAGAAAACGAACCTAAGCTTAGCAGAGAGATTCAAAATGCGTTTTAAAAATTTGACAT
ATGTTGAAAGAATGTAAAGA

Downstream 100 bases:

>100_bases
AATCTACTCAACTATTCGTGGCGCAGCGCATCAATAGGATTAAGCTTTGAGGCTCTCCTTGCGGGAAGATAACCAAAGAG
AACACCAATAAAAGCCGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: D-Ala-D-Ala dipeptidase [H]

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MKLALLLIIIICSFAQGKDSLIEDKMRNIGLFALEEIDKDTFITRLAYDSKENFMKTNIYAPFSLHKCYLHKDMKEHMQK
LAKILKAKNLKLIVYDCFRPQAAQELAWSIVPDTRYVAHPKKGSNHSRGIAIDVGLAQGNGEALSMPSAFDEFSAKAWRD
YMCPQSRTQNCTHRNELQEIMSQAGLKSIKTEWWHFELPISNKHGYPILSLP

Sequences:

>Translated_212_residues
MKLALLLIIIICSFAQGKDSLIEDKMRNIGLFALEEIDKDTFITRLAYDSKENFMKTNIYAPFSLHKCYLHKDMKEHMQK
LAKILKAKNLKLIVYDCFRPQAAQELAWSIVPDTRYVAHPKKGSNHSRGIAIDVGLAQGNGEALSMPSAFDEFSAKAWRD
YMCPQSRTQNCTHRNELQEIMSQAGLKSIKTEWWHFELPISNKHGYPILSLP
>Mature_212_residues
MKLALLLIIIICSFAQGKDSLIEDKMRNIGLFALEEIDKDTFITRLAYDSKENFMKTNIYAPFSLHKCYLHKDMKEHMQK
LAKILKAKNLKLIVYDCFRPQAAQELAWSIVPDTRYVAHPKKGSNHSRGIAIDVGLAQGNGEALSMPSAFDEFSAKAWRD
YMCPQSRTQNCTHRNELQEIMSQAGLKSIKTEWWHFELPISNKHGYPILSLP

Specific function: Hydrolyzes D-Ala-D-Ala. May have a role in cell-wall turnover [H]

COG id: COG2173

COG function: function code M; D-alanyl-D-alanine dipeptidase

Gene ontology:

Cell location: Secreted (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M15D family [H]

Homologues:

Organism=Escherichia coli, GI1787763, Length=168, Percent_Identity=36.9047619047619, Blast_Score=110, Evalue=7e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009045
- InterPro:   IPR000755 [H]

Pfam domain/function: PF01427 Peptidase_M15 [H]

EC number: =3.4.13.22 [H]

Molecular weight: Translated: 24305; Mature: 24305

Theoretical pI: Translated: 8.93; Mature: 8.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLALLLIIIICSFAQGKDSLIEDKMRNIGLFALEEIDKDTFITRLAYDSKENFMKTNIY
CHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHCCCCCCEECCCC
APFSLHKCYLHKDMKEHMQKLAKILKAKNLKLIVYDCFRPQAAQELAWSIVPDTRYVAHP
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHCCCCCCEEECC
KKGSNHSRGIAIDVGLAQGNGEALSMPSAFDEFSAKAWRDYMCPQSRTQNCTHRNELQEI
CCCCCCCCCEEEEEEEECCCCCEEECCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
MSQAGLKSIKTEWWHFELPISNKHGYPILSLP
HHHHCHHHHCCCCEEEEECCCCCCCCEEEECC
>Mature Secondary Structure
MKLALLLIIIICSFAQGKDSLIEDKMRNIGLFALEEIDKDTFITRLAYDSKENFMKTNIY
CHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHCCCCCCEECCCC
APFSLHKCYLHKDMKEHMQKLAKILKAKNLKLIVYDCFRPQAAQELAWSIVPDTRYVAHP
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHCCCCCCEEECC
KKGSNHSRGIAIDVGLAQGNGEALSMPSAFDEFSAKAWRDYMCPQSRTQNCTHRNELQEI
CCCCCCCCCEEEEEEEECCCCCEEECCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
MSQAGLKSIKTEWWHFELPISNKHGYPILSLP
HHHHCHHHHCCCCEEEEECCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503; 9751644 [H]