Definition Helicobacter hepaticus ATCC 51449 chromosome, complete genome.
Accession NC_004917
Length 1,799,146

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The map label for this gene is 32267360

Identifier: 32267360

GI number: 32267360

Start: 1782509

End: 1783933

Strand: Direct

Name: 32267360

Synonym: HH1861

Alternate gene names: NA

Gene position: 1782509-1783933 (Clockwise)

Preceding gene: 32267354

Following gene: 32267361

Centisome position: 99.08

GC content: 32.7

Gene sequence:

>1425_bases
TTGAGACAAATTGTATTCATAAGTATGCTATGGATTACTATAATTTTTATGACTGCTTGCTCACACCACGATTCTTTACA
ATCATTTAATAAATATTACTACGGTGGCAATGATGAAAAAGCCTATAAATATGCCAAAGACAAAGCCGGAAAATCTGGAG
ATGTATTATGGAATCTTCAAGCGGGTGTGAGTGCATTTACTTCACATCAAGAAGATACTCTAAATCTTTTAGAACAAGGT
GAAACACTCTTTAGCAAATATGAATCAGAAGGTTTAATGGGTGGCATATTTGGCAGTGTAGGTTCAGTGCTTGTTAATGA
AAATATTAGAGATTATCGTGGCAATATTTATGAGGGCGTTATGTTCAATTATTATAAGGCACTCAATACTATGTCGCAAA
AAGACTATGCTCGTGCACGTGTAGAATTTAATCGTGCAAATGACAGACAACGTCGTGCTAAAGATTACTTTAATAAAGAT
ATTCAAAAAGCTCTTGCACAAGAACATAAACAAAATGCACAAGATAGGAATCTTCAGCAAGTTGATACTCACTCTTCTAT
CTCTTCTCTTTTGCAAAAAGAATACAGCAATTTAAAAAATTTTCAAGCTTATGAGGGCTTTATCAATCCTGCAGTAAGTT
ATGTTTCCGCGCTTTTTTTTATGCTTGAAGAAGATTACAATAAAGCAATGGATTTATACAAAGAATCTTATGGGATTAAT
CACGCTTCAATCATTAATCAAGACTTACAAATAATGCAAAAGCGTAAAAATAGTAATACAGATGCTAGATATACTTGGTT
TATTATTGAAGATGGGCAAAGTGCGCATAAACAGGATATGTCAATTAATTTACCTACATTTTATGTTAGCAATAATGTCT
TGCACGTAGGTGTTGCTATACCAATGCTTGTAGAAGGAAAAATAAGTGCTCGCATATATCAAGCTCAAAGCACAGAACAA
CAAAATTTTAAAGCCTCTGAAGTAGCTGATTTAGATAAAGTGATTGCAAATGAATTTAATAAGCAACTCCCCTTTATTCT
TACACGCACAATCTCTTCTGCTATACTCAAATCAATTACTCAAAATGTATTGGATAATCAATTTGGCACAATAGGAGCTT
TAGCAGGTGCACTTTATTCTATGAGCACAACAAATGCTGATGTGCGTATTGCTACAGCTTTACCCAAACGTGTACTTGTG
CTACAAATTCCAAATAATGTGGGTAAATTTATGCTTCAGGCTGATAATCGTCCACTTTATAATGTGCATTTTGAGTGTAT
AAAAGAAACATCTTTACAAAAAAATATGCAAAAAATAAAAAATATTATTACTTTATGTGAAAAAAACGATAACATTCTAT
ATTTGCGTGTCAAGGGTAATAACCCAACTTATAGAATCTTAAAGGGCGGTAACATTGATGAATAA

Upstream 100 bases:

>100_bases
TTAAAATGATATTGAAAAAATGTGAAATTAAAGTGAATCTTAAATATTAAAAGATTAGAATCCAAAACTACTTAAATCTT
AACATTTTAGAGAGAATCAT

Downstream 100 bases:

>100_bases
AGCTTTTTTATATCTTATAACCATAGGTGCATTATTTATGGTAGGTTGTAGCACATCACCAAAATATATTAATACAGCAG
ATTCTAAATCTTATACAAGT

Product: hypothetical protein

Products: NA

Alternate protein names: Sporulation Domain-Containing Protein; TPR Repeat-Containing Protein

Number of amino acids: Translated: 474; Mature: 474

Protein sequence:

>474_residues
MRQIVFISMLWITIIFMTACSHHDSLQSFNKYYYGGNDEKAYKYAKDKAGKSGDVLWNLQAGVSAFTSHQEDTLNLLEQG
ETLFSKYESEGLMGGIFGSVGSVLVNENIRDYRGNIYEGVMFNYYKALNTMSQKDYARARVEFNRANDRQRRAKDYFNKD
IQKALAQEHKQNAQDRNLQQVDTHSSISSLLQKEYSNLKNFQAYEGFINPAVSYVSALFFMLEEDYNKAMDLYKESYGIN
HASIINQDLQIMQKRKNSNTDARYTWFIIEDGQSAHKQDMSINLPTFYVSNNVLHVGVAIPMLVEGKISARIYQAQSTEQ
QNFKASEVADLDKVIANEFNKQLPFILTRTISSAILKSITQNVLDNQFGTIGALAGALYSMSTTNADVRIATALPKRVLV
LQIPNNVGKFMLQADNRPLYNVHFECIKETSLQKNMQKIKNIITLCEKNDNILYLRVKGNNPTYRILKGGNIDE

Sequences:

>Translated_474_residues
MRQIVFISMLWITIIFMTACSHHDSLQSFNKYYYGGNDEKAYKYAKDKAGKSGDVLWNLQAGVSAFTSHQEDTLNLLEQG
ETLFSKYESEGLMGGIFGSVGSVLVNENIRDYRGNIYEGVMFNYYKALNTMSQKDYARARVEFNRANDRQRRAKDYFNKD
IQKALAQEHKQNAQDRNLQQVDTHSSISSLLQKEYSNLKNFQAYEGFINPAVSYVSALFFMLEEDYNKAMDLYKESYGIN
HASIINQDLQIMQKRKNSNTDARYTWFIIEDGQSAHKQDMSINLPTFYVSNNVLHVGVAIPMLVEGKISARIYQAQSTEQ
QNFKASEVADLDKVIANEFNKQLPFILTRTISSAILKSITQNVLDNQFGTIGALAGALYSMSTTNADVRIATALPKRVLV
LQIPNNVGKFMLQADNRPLYNVHFECIKETSLQKNMQKIKNIITLCEKNDNILYLRVKGNNPTYRILKGGNIDE
>Mature_474_residues
MRQIVFISMLWITIIFMTACSHHDSLQSFNKYYYGGNDEKAYKYAKDKAGKSGDVLWNLQAGVSAFTSHQEDTLNLLEQG
ETLFSKYESEGLMGGIFGSVGSVLVNENIRDYRGNIYEGVMFNYYKALNTMSQKDYARARVEFNRANDRQRRAKDYFNKD
IQKALAQEHKQNAQDRNLQQVDTHSSISSLLQKEYSNLKNFQAYEGFINPAVSYVSALFFMLEEDYNKAMDLYKESYGIN
HASIINQDLQIMQKRKNSNTDARYTWFIIEDGQSAHKQDMSINLPTFYVSNNVLHVGVAIPMLVEGKISARIYQAQSTEQ
QNFKASEVADLDKVIANEFNKQLPFILTRTISSAILKSITQNVLDNQFGTIGALAGALYSMSTTNADVRIATALPKRVLV
LQIPNNVGKFMLQADNRPLYNVHFECIKETSLQKNMQKIKNIITLCEKNDNILYLRVKGNNPTYRILKGGNIDE

Specific function: Unknown

COG id: COG3014

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54047; Mature: 54047

Theoretical pI: Translated: 8.78; Mature: 8.78

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQIVFISMLWITIIFMTACSHHDSLQSFNKYYYGGNDEKAYKYAKDKAGKSGDVLWNLQ
CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCEEEEEH
AGVSAFTSHQEDTLNLLEQGETLFSKYESEGLMGGIFGSVGSVLVNENIRDYRGNIYEGV
HHHHHHHCCCHHHHHHHHHCHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHCCCHHHHH
MFNYYKALNTMSQKDYARARVEFNRANDRQRRAKDYFNKDIQKALAQEHKQNAQDRNLQQ
HHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHH
VDTHSSISSLLQKEYSNLKNFQAYEGFINPAVSYVSALFFMLEEDYNKAMDLYKESYGIN
HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
HASIINQDLQIMQKRKNSNTDARYTWFIIEDGQSAHKQDMSINLPTFYVSNNVLHVGVAI
HHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCEECCCEEEEECCEEEEEEEE
PMLVEGKISARIYQAQSTEQQNFKASEVADLDKVIANEFNKQLPFILTRTISSAILKSIT
EEEECCCHHHEEEECCCCHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
QNVLDNQFGTIGALAGALYSMSTTNADVRIATALPKRVLVLQIPNNVGKFMLQADNRPLY
HHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEEECCCCCCCEEEECCCCCEE
NVHFECIKETSLQKNMQKIKNIITLCEKNDNILYLRVKGNNPTYRILKGGNIDE
EHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEECCCCCC
>Mature Secondary Structure
MRQIVFISMLWITIIFMTACSHHDSLQSFNKYYYGGNDEKAYKYAKDKAGKSGDVLWNLQ
CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCEEEEEH
AGVSAFTSHQEDTLNLLEQGETLFSKYESEGLMGGIFGSVGSVLVNENIRDYRGNIYEGV
HHHHHHHCCCHHHHHHHHHCHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHCCCHHHHH
MFNYYKALNTMSQKDYARARVEFNRANDRQRRAKDYFNKDIQKALAQEHKQNAQDRNLQQ
HHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHH
VDTHSSISSLLQKEYSNLKNFQAYEGFINPAVSYVSALFFMLEEDYNKAMDLYKESYGIN
HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
HASIINQDLQIMQKRKNSNTDARYTWFIIEDGQSAHKQDMSINLPTFYVSNNVLHVGVAI
HHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCEECCCEEEEECCEEEEEEEE
PMLVEGKISARIYQAQSTEQQNFKASEVADLDKVIANEFNKQLPFILTRTISSAILKSIT
EEEECCCHHHEEEECCCCHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
QNVLDNQFGTIGALAGALYSMSTTNADVRIATALPKRVLVLQIPNNVGKFMLQADNRPLY
HHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEEECCCCCCCEEEECCCCCEE
NVHFECIKETSLQKNMQKIKNIITLCEKNDNILYLRVKGNNPTYRILKGGNIDE
EHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA