| Definition | Helicobacter hepaticus ATCC 51449 chromosome, complete genome. |
|---|---|
| Accession | NC_004917 |
| Length | 1,799,146 |
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The map label for this gene is flgE
Identifier: 32267203
GI number: 32267203
Start: 1629286
End: 1631442
Strand: Direct
Name: flgE
Synonym: HH1704
Alternate gene names: 32267203
Gene position: 1629286-1631442 (Clockwise)
Preceding gene: 32267200
Following gene: 32267204
Centisome position: 90.56
GC content: 39.55
Gene sequence:
>2157_bases ATGTTAAGGTCTTTATGGTCAGGGGTTAGTGGTATGCAGGCGCACCAAATTGCGCTTGATGTGGAAAGTAACAATATTGC TAATGTCAATACCGTTGGTTTTAAATACTCAAGAGCATCTTTTGTGGATATGCTTTCACAAATTAAGCTTATTGCAACTT CGCCTTATAAGAATGGATTAGGAGGGCAAAATGATTTTTCGGTAGGACTAGGTGTTGGGATTGATGCGACAACAAAAGTA TTTTCACAGGGAAACACACAAAATACAGATGTAAAAACAGATGTTGCCATTGAGGGCGATGGTTTTTTTATTATTTCTCC TGATAGAGGCACAACACATAATTATACTCGTAATGGCGAATTTCTTTTTGATGCGAATGGGAATCTTGTAACCACAGGTG GGTATGTTGTGCAAGGTTGGGTGCGTCCGCCATTAGAAGCAGCAGAATCTGGCACAATGAGTGATTTTGATTTTTTTAGG GTAGATAATACGGGACCTGTGCGCAATATTCAAATTGACCCCGGTATGGTTATGCCAGCGCGCGCAACCAAAACTATTAC TTTACGCGCTAATTTGAATGCAGGAAGACATATTGACCAAATGCAAGATGTTGCAGCTTTAGATTCTACGGCACAAACAG CAGCAGATGGCGTAGTGGCTATCTACGATTCGCGTGGAGTGCTTACACAAGTAGGTGAGGATTTGGGTGTGTTATTTAAT GATGATGGTGATGCATTTGCTTTAAATGAAAATCAAGGTATTTGGTTAAGTTATAAAACAGCTGCTATTCGCCACGAAAC CGTTGTAACAAATGAAGTGAGCACAATAGGTATCAATGGTGAAAAAGTCAGCTTTTCAAATAACTCTGCGATTACGGGTG TAAGCTCAATCGTAGCCGCACAAAATGCTATTAATTCATTGCGTGATAAAACAGGTGTAAATGCTTATGTAGATGCAGGA CAGCTAAGAATTGAGAATCGCAATCAAATGGACGGCGGGGAAAAGGTAAAAAATATTCGTATTACTTCTGGTGGCACAGG CGTGTTGCAAAATTTTGTTCAAGGCGAAGAAGATATTACTGCTTTTAGATACCGCTATACTAAATCTGAAGATGCAGATT CTACCACCGGGCAATTTAGAACAACAGAAGACTTGCGCGCCCTCATACAATATGATGCGAATATGATTAAAAATCCTGAA AAAACTTATTATGAAAGCACAGCTACGGTAGGAGTAACAATTAATCGTTGGGGTATGTTTGAGATTGCTAATCACGATGA TGCCGATGATGAACAACGTAATCTTAGTTTATATGTTACAAGCCATTTTTCCGATAATGTAACAAATAATGTGCTTTTTA AAGAAACAATGAAAGCTTTAAATACAGCTTCTTTGATTGAAGGTGGTGCAGCAGTAAATACGGGCAAAATTGTCAAAGCC ACACACGCTACAAGTGTAGATATTGTTGATAGTTTGGGAAGTAAGCATAATGTTCGCTTTGAGTTTTGGAAAACAGGTGA TGCAGTATGGAGTTTCCGTGCGATTGTGCCTGAACCTGCACAATTTATTGGAGGTTCTATCACTAAGCCAAATGTTTTTG AAGGTGGAAGAGCAAGTTTTAATAGTGATGGTTCGCTTTCAGGTATGAATCCACCTGTTTTACAATTTGACCCAAAAAAT GGTTCAAAAGGACCACAAAGATTGGAACTTAAATTTGGAGCAAACGAAACTTTTGGTGGGCTAACGAGCGTAGATAAGAT TTCAGAAACTTATTCAATTAACCAAAATGGCTACCAAGCAGGGGATTTAATGGATATTCGCTTTGACTCCAATGGTTCTT TGCTTGGTGCATTTAGTAATGGACGCTCCATTGCCCTTGCTCAAGTGGCACTTGCAAACTTTGCAAATAATGCCGGTTTG CAAGCAGAGGGAGGAAATGTATATTCCCAAACAGGAAACTCTGGGGAACCAATGGTGGGCGCAGCAAATACAGGGCGCAG AGGCGGTGTGTCTGGTTCAAAACTTGAGATGAGTAATGTGGATTTAAGTCGCTCTTTGACACAGCTTATTGTTGTGCAAA GAGGATTCCAAGCAAACTCAAAAGCAGTAACAACTTCAGACCAGATTCTTAATACTTTACTTAATCTCAAACAATAA
Upstream 100 bases:
>100_bases AAAATTTTTAGTATTTATACATAAAATTTATCAAAATTGGAATATCTATTGCTTGTAAGTGCGTTATAAATATCGTAGAT TCTATCAGAAAGGATGTAAT
Downstream 100 bases:
>100_bases TTGAGGTTAATTGAGTAGGCTTAGAAATAACCTACTCAATCTTTTTAACATTTTTGTAACATTTCTTCCCCTACTTAGCT TTTAACACTTTCTTGTTTTA
Product: flagellar hook protein FlgE
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 718; Mature: 718
Protein sequence:
>718_residues MLRSLWSGVSGMQAHQIALDVESNNIANVNTVGFKYSRASFVDMLSQIKLIATSPYKNGLGGQNDFSVGLGVGIDATTKV FSQGNTQNTDVKTDVAIEGDGFFIISPDRGTTHNYTRNGEFLFDANGNLVTTGGYVVQGWVRPPLEAAESGTMSDFDFFR VDNTGPVRNIQIDPGMVMPARATKTITLRANLNAGRHIDQMQDVAALDSTAQTAADGVVAIYDSRGVLTQVGEDLGVLFN DDGDAFALNENQGIWLSYKTAAIRHETVVTNEVSTIGINGEKVSFSNNSAITGVSSIVAAQNAINSLRDKTGVNAYVDAG QLRIENRNQMDGGEKVKNIRITSGGTGVLQNFVQGEEDITAFRYRYTKSEDADSTTGQFRTTEDLRALIQYDANMIKNPE KTYYESTATVGVTINRWGMFEIANHDDADDEQRNLSLYVTSHFSDNVTNNVLFKETMKALNTASLIEGGAAVNTGKIVKA THATSVDIVDSLGSKHNVRFEFWKTGDAVWSFRAIVPEPAQFIGGSITKPNVFEGGRASFNSDGSLSGMNPPVLQFDPKN GSKGPQRLELKFGANETFGGLTSVDKISETYSINQNGYQAGDLMDIRFDSNGSLLGAFSNGRSIALAQVALANFANNAGL QAEGGNVYSQTGNSGEPMVGAANTGRRGGVSGSKLEMSNVDLSRSLTQLIVVQRGFQANSKAVTTSDQILNTLLNLKQ
Sequences:
>Translated_718_residues MLRSLWSGVSGMQAHQIALDVESNNIANVNTVGFKYSRASFVDMLSQIKLIATSPYKNGLGGQNDFSVGLGVGIDATTKV FSQGNTQNTDVKTDVAIEGDGFFIISPDRGTTHNYTRNGEFLFDANGNLVTTGGYVVQGWVRPPLEAAESGTMSDFDFFR VDNTGPVRNIQIDPGMVMPARATKTITLRANLNAGRHIDQMQDVAALDSTAQTAADGVVAIYDSRGVLTQVGEDLGVLFN DDGDAFALNENQGIWLSYKTAAIRHETVVTNEVSTIGINGEKVSFSNNSAITGVSSIVAAQNAINSLRDKTGVNAYVDAG QLRIENRNQMDGGEKVKNIRITSGGTGVLQNFVQGEEDITAFRYRYTKSEDADSTTGQFRTTEDLRALIQYDANMIKNPE KTYYESTATVGVTINRWGMFEIANHDDADDEQRNLSLYVTSHFSDNVTNNVLFKETMKALNTASLIEGGAAVNTGKIVKA THATSVDIVDSLGSKHNVRFEFWKTGDAVWSFRAIVPEPAQFIGGSITKPNVFEGGRASFNSDGSLSGMNPPVLQFDPKN GSKGPQRLELKFGANETFGGLTSVDKISETYSINQNGYQAGDLMDIRFDSNGSLLGAFSNGRSIALAQVALANFANNAGL QAEGGNVYSQTGNSGEPMVGAANTGRRGGVSGSKLEMSNVDLSRSLTQLIVVQRGFQANSKAVTTSDQILNTLLNLKQ >Mature_718_residues MLRSLWSGVSGMQAHQIALDVESNNIANVNTVGFKYSRASFVDMLSQIKLIATSPYKNGLGGQNDFSVGLGVGIDATTKV FSQGNTQNTDVKTDVAIEGDGFFIISPDRGTTHNYTRNGEFLFDANGNLVTTGGYVVQGWVRPPLEAAESGTMSDFDFFR VDNTGPVRNIQIDPGMVMPARATKTITLRANLNAGRHIDQMQDVAALDSTAQTAADGVVAIYDSRGVLTQVGEDLGVLFN DDGDAFALNENQGIWLSYKTAAIRHETVVTNEVSTIGINGEKVSFSNNSAITGVSSIVAAQNAINSLRDKTGVNAYVDAG QLRIENRNQMDGGEKVKNIRITSGGTGVLQNFVQGEEDITAFRYRYTKSEDADSTTGQFRTTEDLRALIQYDANMIKNPE KTYYESTATVGVTINRWGMFEIANHDDADDEQRNLSLYVTSHFSDNVTNNVLFKETMKALNTASLIEGGAAVNTGKIVKA THATSVDIVDSLGSKHNVRFEFWKTGDAVWSFRAIVPEPAQFIGGSITKPNVFEGGRASFNSDGSLSGMNPPVLQFDPKN GSKGPQRLELKFGANETFGGLTSVDKISETYSINQNGYQAGDLMDIRFDSNGSLLGAFSNGRSIALAQVALANFANNAGL QAEGGNVYSQTGNSGEPMVGAANTGRRGGVSGSKLEMSNVDLSRSLTQLIVVQRGFQANSKAVTTSDQILNTLLNLKQ
Specific function: Unknown
COG id: COG1749
COG function: function code N; Flagellar hook protein FlgE
Gene ontology:
Cell location: Bacterial flagellum basal body [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flagella basal body rod proteins family [H]
Homologues:
Organism=Escherichia coli, GI1787316, Length=239, Percent_Identity=34.7280334728033, Blast_Score=130, Evalue=2e-31, Organism=Escherichia coli, GI1787318, Length=148, Percent_Identity=41.2162162162162, Blast_Score=100, Evalue=4e-22,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010930 - InterPro: IPR011491 - InterPro: IPR001444 - InterPro: IPR020013 - InterPro: IPR010810 - InterPro: IPR012835 [H]
Pfam domain/function: PF06429 DUF1078; PF07559 FlaE; PF07196 Flagellin_IN; PF00460 Flg_bb_rod [H]
EC number: NA
Molecular weight: Translated: 77100; Mature: 77100
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRSLWSGVSGMQAHQIALDVESNNIANVNTVGFKYSRASFVDMLSQIKLIATSPYKNGL CCHHHHCCCCCCEEEEEEEEECCCCCCEEEECCEEECHHHHHHHHHHEEEEEECCCCCCC GGQNDFSVGLGVGIDATTKVFSQGNTQNTDVKTDVAIEGDGFFIISPDRGTTHNYTRNGE CCCCCCEEEEECCCCHHHHHHHCCCCCCCCEEEEEEEECCCEEEECCCCCCCCCCCCCCC FLFDANGNLVTTGGYVVQGWVRPPLEAAESGTMSDFDFFRVDNTGPVRNIQIDPGMVMPA EEEECCCCEEEECCEEEEECCCCCHHHHCCCCCCCCEEEEECCCCCEEEEEECCCEEECC RATKTITLRANLNAGRHIDQMQDVAALDSTAQTAADGVVAIYDSRGVLTQVGEDLGVLFN CCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHCCCCCCEEEC DDGDAFALNENQGIWLSYKTAAIRHETVVTNEVSTIGINGEKVSFSNNSAITGVSSIVAA CCCCEEEEECCCCEEEEEEEEEEEECEEEECCCEEEECCCCEEEECCCCCHHHHHHHHHH QNAINSLRDKTGVNAYVDAGQLRIENRNQMDGGEKVKNIRITSGGTGVLQNFVQGEEDIT HHHHHHHHHHCCCEEEEECCEEEECCCCCCCCCCEEEEEEEECCCHHHHHHHHCCCCCEE AFRYRYTKSEDADSTTGQFRTTEDLRALIQYDANMIKNPEKTYYESTATVGVTINRWGMF EEEEEECCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCHHHEECCEEEEEEEECCEEE EIANHDDADDEQRNLSLYVTSHFSDNVTNNVLFKETMKALNTASLIEGGAAVNTGKIVKA EECCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEECCCCEEEE THATSVDIVDSLGSKHNVRFEFWKTGDAVWSFRAIVPEPAQFIGGSITKPNVFEGGRASF ECCCCHHHHHHCCCCCCEEEEEEECCCCEEEEEEECCCCHHHHCCCCCCCCCCCCCCCCC NSDGSLSGMNPPVLQFDPKNGSKGPQRLELKFGANETFGGLTSVDKISETYSINQNGYQA CCCCCCCCCCCCEEEECCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHEEECCCCCCC GDLMDIRFDSNGSLLGAFSNGRSIALAQVALANFANNAGLQAEGGNVYSQTGNSGEPMVG CCEEEEEECCCCCEEEEECCCCEEEHHHHHHHHHCCCCCCEECCCEEEECCCCCCCCEEE AANTGRRGGVSGSKLEMSNVDLSRSLTQLIVVQRGFQANSKAVTTSDQILNTLLNLKQ ECCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCCEEECHHHHHHHHHHCCC >Mature Secondary Structure MLRSLWSGVSGMQAHQIALDVESNNIANVNTVGFKYSRASFVDMLSQIKLIATSPYKNGL CCHHHHCCCCCCEEEEEEEEECCCCCCEEEECCEEECHHHHHHHHHHEEEEEECCCCCCC GGQNDFSVGLGVGIDATTKVFSQGNTQNTDVKTDVAIEGDGFFIISPDRGTTHNYTRNGE CCCCCCEEEEECCCCHHHHHHHCCCCCCCCEEEEEEEECCCEEEECCCCCCCCCCCCCCC FLFDANGNLVTTGGYVVQGWVRPPLEAAESGTMSDFDFFRVDNTGPVRNIQIDPGMVMPA EEEECCCCEEEECCEEEEECCCCCHHHHCCCCCCCCEEEEECCCCCEEEEEECCCEEECC RATKTITLRANLNAGRHIDQMQDVAALDSTAQTAADGVVAIYDSRGVLTQVGEDLGVLFN CCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHCCCCCCEEEC DDGDAFALNENQGIWLSYKTAAIRHETVVTNEVSTIGINGEKVSFSNNSAITGVSSIVAA CCCCEEEEECCCCEEEEEEEEEEEECEEEECCCEEEECCCCEEEECCCCCHHHHHHHHHH QNAINSLRDKTGVNAYVDAGQLRIENRNQMDGGEKVKNIRITSGGTGVLQNFVQGEEDIT HHHHHHHHHHCCCEEEEECCEEEECCCCCCCCCCEEEEEEEECCCHHHHHHHHCCCCCEE AFRYRYTKSEDADSTTGQFRTTEDLRALIQYDANMIKNPEKTYYESTATVGVTINRWGMF EEEEEECCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCHHHEECCEEEEEEEECCEEE EIANHDDADDEQRNLSLYVTSHFSDNVTNNVLFKETMKALNTASLIEGGAAVNTGKIVKA EECCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEECCCCEEEE THATSVDIVDSLGSKHNVRFEFWKTGDAVWSFRAIVPEPAQFIGGSITKPNVFEGGRASF ECCCCHHHHHHCCCCCCEEEEEEECCCCEEEEEEECCCCHHHHCCCCCCCCCCCCCCCCC NSDGSLSGMNPPVLQFDPKNGSKGPQRLELKFGANETFGGLTSVDKISETYSINQNGYQA CCCCCCCCCCCCEEEECCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHEEECCCCCCC GDLMDIRFDSNGSLLGAFSNGRSIALAQVALANFANNAGLQAEGGNVYSQTGNSGEPMVG CCEEEEEECCCCCEEEEECCCCEEEHHHHHHHHHCCCCCCEECCCEEEECCCCCCCCEEE AANTGRRGGVSGSKLEMSNVDLSRSLTQLIVVQRGFQANSKAVTTSDQILNTLLNLKQ ECCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCCEEECHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]