Definition Helicobacter hepaticus ATCC 51449 chromosome, complete genome.
Accession NC_004917
Length 1,799,146

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The map label for this gene is 32267158

Identifier: 32267158

GI number: 32267158

Start: 1587342

End: 1588679

Strand: Direct

Name: 32267158

Synonym: HH1659

Alternate gene names: NA

Gene position: 1587342-1588679 (Clockwise)

Preceding gene: 32267157

Following gene: 32267167

Centisome position: 88.23

GC content: 31.99

Gene sequence:

>1338_bases
GTGAAAGATTCTCATAAAAATACACATTCACTTTTTGAAGTTGAACTTTTTAGCACAAGAAGACAATGGGCAGTATTTAT
ATGTATTTGCGCGTTGGTTTTTGCTTTGCATTTATATCAAGAATATGTTCAGTATAGAATCTATACTACACCCACACATA
CGCAAGAGCTATATGCACAAGTCATTGCTCAATATACAAAGAGCAAACAAAATAATGGCAAAAATAGCGTCTATGAGGTC
TTAAAGCTCAAAACAAGCGATGGTGAAGTATTTTATACTACAAGTAAAGAAGATATTAAGGATATTTCACATCGTTTTGT
GAGAATCTATGGCAAAAGGCTTGAATGCTCTTTTGCGCAATATTTAAAAAGTTGTTTTTTTATTTCTTATCGTATTTCAC
TTTTGTCTGAATATGATTATCGTCAAGGTGTGAGAAAATGGATAGATTCACAGCATCAAGAATCTTTAGTAGCTGATTTA
TATAAAACGCTTTTTATGGCAGATTTTTTACCACATATTTGGCGTGATATAAGCAATAAGCTTGGTGTTGCCCATTTAAT
TGCTATTAGTGGATTTCATTTGGGGATTTTAAGTTTTGTTATAGGAGGGCTTTTAAGTCTTGTATATAATAGTTTTCATA
GATTTGTGAGCTATCGGAATAAATATTTTGATATTGGATTGCTGGTGCTTGTGTGTCTTTTTGGCTATCTTATTGTGCTT
GATTTTTCACCTTCATTTTTACGCTCTTTTATAATGGCAGTGTGCGGATTCTTTGTCGTATATAGCGGCATTAGATTAAT
CAGTTTTAAATTGCTATTTGTCGTTGTATGCGTGTGTTTAGCACTTTTTCCACGTTTAATCTTTAGTATAGGTTTTGCAC
TTTCTGTAAGTGGCGTATTTTTTATTTATCTTTTTGTGCGCCATATTCATTGGGTAGGTGGATTATGGCATAAAATAGTA
TCTGTACCCATAAGTTTTAATACACTTATTTTTTTAGATATGTTGCCGTTTGTGCATTGGTTTTTTCCTTATTTTACACC
TTTAAATGTGCTTTCAATCCCTCTTAGTCTCATTTTTGTAGTATTTTTTCCTTTAATGCTTGTAGCTCATATATTTGGTT
TTGGGTGGGTGTGTGATGAATTTTTCTTGTGGATAAAAGATAAACAGATTAATGCTATTACATTTTATACGCCATTGTGG
TTTATATGTGGGTATGGTATTTTATGTATATGGGCAATATATTCTAAGAGAGCATATTATGCGCTTCATTGTATGAGTGT
TGCATTTTTTGCTTATCTTATCGTGCAATTTTATAAATCTGGACTCAGTTTATGGTGA

Upstream 100 bases:

>100_bases
GCACGAGATGACACAAACGCGCATTGATGGAGAAGAGTTTATGACACAAATAGAGAATCTGCCTCCACAAGTCCAAATGC
CAAATATTTGATGAATTTAA

Downstream 100 bases:

>100_bases
GTAAGTGTGTAATAAATGTGCTCTTTTTTGCCTAGATCTTGATGAGAGAGAGATAAGAATTTATCGTGTGCCACTGCTAG
AAAAATTGCATCAAAATATT

Product: hypothetical protein

Products: NA

Alternate protein names: ComEC/Rec2-Related Protein; Integral Membrane Protein; DNA Transfer Protein ComE; DNA Uptake Protein; ComEC/Rec2 Family Protein; Inner Membrane Protein OxaA; Competence Protein; Comec/Rec2-Related Protein; Competence Locus E

Number of amino acids: Translated: 445; Mature: 445

Protein sequence:

>445_residues
MKDSHKNTHSLFEVELFSTRRQWAVFICICALVFALHLYQEYVQYRIYTTPTHTQELYAQVIAQYTKSKQNNGKNSVYEV
LKLKTSDGEVFYTTSKEDIKDISHRFVRIYGKRLECSFAQYLKSCFFISYRISLLSEYDYRQGVRKWIDSQHQESLVADL
YKTLFMADFLPHIWRDISNKLGVAHLIAISGFHLGILSFVIGGLLSLVYNSFHRFVSYRNKYFDIGLLVLVCLFGYLIVL
DFSPSFLRSFIMAVCGFFVVYSGIRLISFKLLFVVVCVCLALFPRLIFSIGFALSVSGVFFIYLFVRHIHWVGGLWHKIV
SVPISFNTLIFLDMLPFVHWFFPYFTPLNVLSIPLSLIFVVFFPLMLVAHIFGFGWVCDEFFLWIKDKQINAITFYTPLW
FICGYGILCIWAIYSKRAYYALHCMSVAFFAYLIVQFYKSGLSLW

Sequences:

>Translated_445_residues
MKDSHKNTHSLFEVELFSTRRQWAVFICICALVFALHLYQEYVQYRIYTTPTHTQELYAQVIAQYTKSKQNNGKNSVYEV
LKLKTSDGEVFYTTSKEDIKDISHRFVRIYGKRLECSFAQYLKSCFFISYRISLLSEYDYRQGVRKWIDSQHQESLVADL
YKTLFMADFLPHIWRDISNKLGVAHLIAISGFHLGILSFVIGGLLSLVYNSFHRFVSYRNKYFDIGLLVLVCLFGYLIVL
DFSPSFLRSFIMAVCGFFVVYSGIRLISFKLLFVVVCVCLALFPRLIFSIGFALSVSGVFFIYLFVRHIHWVGGLWHKIV
SVPISFNTLIFLDMLPFVHWFFPYFTPLNVLSIPLSLIFVVFFPLMLVAHIFGFGWVCDEFFLWIKDKQINAITFYTPLW
FICGYGILCIWAIYSKRAYYALHCMSVAFFAYLIVQFYKSGLSLW
>Mature_445_residues
MKDSHKNTHSLFEVELFSTRRQWAVFICICALVFALHLYQEYVQYRIYTTPTHTQELYAQVIAQYTKSKQNNGKNSVYEV
LKLKTSDGEVFYTTSKEDIKDISHRFVRIYGKRLECSFAQYLKSCFFISYRISLLSEYDYRQGVRKWIDSQHQESLVADL
YKTLFMADFLPHIWRDISNKLGVAHLIAISGFHLGILSFVIGGLLSLVYNSFHRFVSYRNKYFDIGLLVLVCLFGYLIVL
DFSPSFLRSFIMAVCGFFVVYSGIRLISFKLLFVVVCVCLALFPRLIFSIGFALSVSGVFFIYLFVRHIHWVGGLWHKIV
SVPISFNTLIFLDMLPFVHWFFPYFTPLNVLSIPLSLIFVVFFPLMLVAHIFGFGWVCDEFFLWIKDKQINAITFYTPLW
FICGYGILCIWAIYSKRAYYALHCMSVAFFAYLIVQFYKSGLSLW

Specific function: Unknown

COG id: COG0658

COG function: function code R; Predicted membrane metal-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52091; Mature: 52091

Theoretical pI: Translated: 9.08; Mature: 9.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA