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The map label for this gene is ctpA [H]

Identifier: 32267117

GI number: 32267117

Start: 1541379

End: 1542764

Strand: Direct

Name: ctpA [H]

Synonym: HH1618

Alternate gene names: 32267117

Gene position: 1541379-1542764 (Clockwise)

Preceding gene: 32267115

Following gene: 32267118

Centisome position: 85.67

GC content: 37.59

Gene sequence:

>1386_bases
ATGCGACCTAAAAGAAATATGTCTACAGAATTTTATATCACAAAGGCAGTGTCAATGATGAATAAATCGCGCGTGGTTGT
AGCAGGTATTATTGTTTCTTTGCTTGCGAGTTCGGCTTTATTTGTGGGGTTATCAGCTGATGAATCCCACAAAGCTAAAC
CAAAAGTGCAGGAAGTCAATAAGCTAGAATCTTTCAAAAAGCTTCGTCGCATTATGGCGATAGTAGAAGAGTCTTATGTT
GATGAATTAAGTCTTGATGAGATTGTCAATAAGGCAATAGATGGATTATTAAGCAATCTTGATGCGCATTCAAATTATCT
TAACAAAAAGAAATTTGATGATTTGCGTGCCAATATTGATGGTGAGTTTGGTGGCATTGGTATCACGGTGGGCTTAAAAG
ATGGTGCTTTGACAATTATTGCACCTGTTGATGGCACACCTGGAGACAAGGCAGGGTTAAAAAGTGGCGATGTTATTGTG
AAGGTAAATGACAAAAGCACGATTGATATGAGTATTGATGATGCAGTAAATCTTATGCGTGGCACACCTCGCACAAAGGT
GGAGCTTACTATTGTGCGTAAGGGTGAAGCAAAACCTCTAAATTTTAGTATTGTAAGAGATATTATCAAGATGGATTTTG
TAAAGGTGCGCAAGATTCAAGATACTGATTTTGCATATGTGCGTGTAGCATCGTTTGATAAAAATGTAACGCGGAATGTA
TTAAGCTCACTCAAACAAATGGGTAAAGTAAAAGGTATTGTGCTTGATTTACGCAATAATCCGGGTGGAGCACTTGACCA
AGCAGTTGATTTGAGTAGATTATTCATCAAAAATGGTGTGATTGTTACCCAAAAAGGACGCAATAAAAATGACAACGTTG
AATATAGAGCAACAAATGCTCCTTATGCTTCTGTGCCTATTGTTGTGCTTGTTAATGGTGGAAGTGCAAGTGCAAGTGAG
ATTGTCGCAGGTGCATTACAAGACCATAAACGTGCTGTTCTTATTGGGGAACAAACATTTGGTAAAGGAAGTGTGCAGAC
ATTTATGCAACTTGACCAAAATGAAGGCTTAAAACTCACTACTGCTAAATATTATTTACCAAGTGGAAGGACGATTCAAG
CAGTGGGTGTAACACCTGATATTATCGTGTATCCCGGTGTAGCACCAGAGAATGAGAATAGTTTTAGCATTAAGGAATCT
GATTTAAAAAGACATCTTCAAGGCGAGCTTGAGAAGGTTAATGAACAAAATACAAAGACAGAAACAGCGAGTGATGATAA
AAAAAATATTACCCAAGCAATGATATATCAAGATATTCAACTTAAAAGTGCTATTGATGTGCTTAAAGCGTGGGGTGTGA
TTGGTGCTTTAAATCCAAACAAGTAA

Upstream 100 bases:

>100_bases
ATTGTGTATTTTTTAATATTCTATAATGGAGCAGATTTTGCTTATTTTTGTTTTGTTGGAGAAATATATATCTTTTATAG
GTAGAATGCACATTTTGTAA

Downstream 100 bases:

>100_bases
TAAGGAGTTAAATCAATGGAAAAACGAGAAATGCTATATGAAGGGAAGGGTAAAAAGCTTTTTGCCACGGATGATGAACA
TATTGTAATTGCAGAGTTTA

Product: protease

Products: NA

Alternate protein names: C-terminal-processing protease [H]

Number of amino acids: Translated: 461; Mature: 461

Protein sequence:

>461_residues
MRPKRNMSTEFYITKAVSMMNKSRVVVAGIIVSLLASSALFVGLSADESHKAKPKVQEVNKLESFKKLRRIMAIVEESYV
DELSLDEIVNKAIDGLLSNLDAHSNYLNKKKFDDLRANIDGEFGGIGITVGLKDGALTIIAPVDGTPGDKAGLKSGDVIV
KVNDKSTIDMSIDDAVNLMRGTPRTKVELTIVRKGEAKPLNFSIVRDIIKMDFVKVRKIQDTDFAYVRVASFDKNVTRNV
LSSLKQMGKVKGIVLDLRNNPGGALDQAVDLSRLFIKNGVIVTQKGRNKNDNVEYRATNAPYASVPIVVLVNGGSASASE
IVAGALQDHKRAVLIGEQTFGKGSVQTFMQLDQNEGLKLTTAKYYLPSGRTIQAVGVTPDIIVYPGVAPENENSFSIKES
DLKRHLQGELEKVNEQNTKTETASDDKKNITQAMIYQDIQLKSAIDVLKAWGVIGALNPNK

Sequences:

>Translated_461_residues
MRPKRNMSTEFYITKAVSMMNKSRVVVAGIIVSLLASSALFVGLSADESHKAKPKVQEVNKLESFKKLRRIMAIVEESYV
DELSLDEIVNKAIDGLLSNLDAHSNYLNKKKFDDLRANIDGEFGGIGITVGLKDGALTIIAPVDGTPGDKAGLKSGDVIV
KVNDKSTIDMSIDDAVNLMRGTPRTKVELTIVRKGEAKPLNFSIVRDIIKMDFVKVRKIQDTDFAYVRVASFDKNVTRNV
LSSLKQMGKVKGIVLDLRNNPGGALDQAVDLSRLFIKNGVIVTQKGRNKNDNVEYRATNAPYASVPIVVLVNGGSASASE
IVAGALQDHKRAVLIGEQTFGKGSVQTFMQLDQNEGLKLTTAKYYLPSGRTIQAVGVTPDIIVYPGVAPENENSFSIKES
DLKRHLQGELEKVNEQNTKTETASDDKKNITQAMIYQDIQLKSAIDVLKAWGVIGALNPNK
>Mature_461_residues
MRPKRNMSTEFYITKAVSMMNKSRVVVAGIIVSLLASSALFVGLSADESHKAKPKVQEVNKLESFKKLRRIMAIVEESYV
DELSLDEIVNKAIDGLLSNLDAHSNYLNKKKFDDLRANIDGEFGGIGITVGLKDGALTIIAPVDGTPGDKAGLKSGDVIV
KVNDKSTIDMSIDDAVNLMRGTPRTKVELTIVRKGEAKPLNFSIVRDIIKMDFVKVRKIQDTDFAYVRVASFDKNVTRNV
LSSLKQMGKVKGIVLDLRNNPGGALDQAVDLSRLFIKNGVIVTQKGRNKNDNVEYRATNAPYASVPIVVLVNGGSASASE
IVAGALQDHKRAVLIGEQTFGKGSVQTFMQLDQNEGLKLTTAKYYLPSGRTIQAVGVTPDIIVYPGVAPENENSFSIKES
DLKRHLQGELEKVNEQNTKTETASDDKKNITQAMIYQDIQLKSAIDVLKAWGVIGALNPNK

Specific function: Involved in protection of the bacterium from thermal and osmotic stresses (Potential) [H]

COG id: COG0793

COG function: function code M; Periplasmic protease

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Escherichia coli, GI1788134, Length=326, Percent_Identity=31.5950920245399, Blast_Score=134, Evalue=9e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR005151
- InterPro:   IPR004447 [H]

Pfam domain/function: PF00595 PDZ; PF03572 Peptidase_S41 [H]

EC number: =3.4.21.102 [H]

Molecular weight: Translated: 50336; Mature: 50336

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPKRNMSTEFYITKAVSMMNKSRVVVAGIIVSLLASSALFVGLSADESHKAKPKVQEVN
CCCCCCCCCEEEHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHH
KLESFKKLRRIMAIVEESYVDELSLDEIVNKAIDGLLSNLDAHSNYLNKKKFDDLRANID
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GEFGGIGITVGLKDGALTIIAPVDGTPGDKAGLKSGDVIVKVNDKSTIDMSIDDAVNLMR
CCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCEEEEECCCCEEEEEHHHHHHHHC
GTPRTKVELTIVRKGEAKPLNFSIVRDIIKMDFVKVRKIQDTDFAYVRVASFDKNVTRNV
CCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHEEEECCCCEEEEEEECCCCHHHHHH
LSSLKQMGKVKGIVLDLRNNPGGALDQAVDLSRLFIKNGVIVTQKGRNKNDNVEYRATNA
HHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCEEEEECCC
PYASVPIVVLVNGGSASASEIVAGALQDHKRAVLIGEQTFGKGSVQTFMQLDQNEGLKLT
CCCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHCCCCCEEEE
TAKYYLPSGRTIQAVGVTPDIIVYPGVAPENENSFSIKESDLKRHLQGELEKVNEQNTKT
EEEEECCCCCEEEEECCCCCEEEECCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCC
ETASDDKKNITQAMIYQDIQLKSAIDVLKAWGVIGALNPNK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCC
>Mature Secondary Structure
MRPKRNMSTEFYITKAVSMMNKSRVVVAGIIVSLLASSALFVGLSADESHKAKPKVQEVN
CCCCCCCCCEEEHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHH
KLESFKKLRRIMAIVEESYVDELSLDEIVNKAIDGLLSNLDAHSNYLNKKKFDDLRANID
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GEFGGIGITVGLKDGALTIIAPVDGTPGDKAGLKSGDVIVKVNDKSTIDMSIDDAVNLMR
CCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCEEEEECCCCEEEEEHHHHHHHHC
GTPRTKVELTIVRKGEAKPLNFSIVRDIIKMDFVKVRKIQDTDFAYVRVASFDKNVTRNV
CCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHEEEECCCCEEEEEEECCCCHHHHHH
LSSLKQMGKVKGIVLDLRNNPGGALDQAVDLSRLFIKNGVIVTQKGRNKNDNVEYRATNA
HHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCEEEEECCC
PYASVPIVVLVNGGSASASEIVAGALQDHKRAVLIGEQTFGKGSVQTFMQLDQNEGLKLT
CCCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHCCCCCEEEE
TAKYYLPSGRTIQAVGVTPDIIVYPGVAPENENSFSIKESDLKRHLQGELEKVNEQNTKT
EEEEECCCCCEEEEECCCCCEEEECCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCC
ETASDDKKNITQAMIYQDIQLKSAIDVLKAWGVIGALNPNK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141685 [H]