| Definition | Helicobacter hepaticus ATCC 51449 chromosome, complete genome. |
|---|---|
| Accession | NC_004917 |
| Length | 1,799,146 |
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The map label for this gene is actP
Identifier: 32267046
GI number: 32267046
Start: 1482209
End: 1483858
Strand: Direct
Name: actP
Synonym: HH1547
Alternate gene names: 32267046
Gene position: 1482209-1483858 (Clockwise)
Preceding gene: 32267045
Following gene: 32267048
Centisome position: 82.38
GC content: 36.61
Gene sequence:
>1650_bases ATGAAAAGTTTATTTTTTAGCTTAAGCTTATTAAGTGTAAATTCGCTTTTTGGTGCATCTATTGATTTTGGTGGTGCAAA ATCAGACATTAATCCAATAGCGATAGGTATGTTTTTAGCCTTTGTGCTTGCAACTTTATTTATTACTTATCTTTCTAACA AAAAGAGTCAATCTGCAAGTGGTTTTTATACTGCAGGGGGTAATATCACTGGTATGCAAAATGGTGTAGCTATTGCTGGA GATTATATGAGTGCAGCGAGCTTTTTAGGTATTACTGCGCTTGTATTTACAAATGGCTTTGATGGACTTATTTATTCCAT AGGATTTTTAGCTGGGTGGCCTATCATTTTGTTTTTGATTGCTGAAAAATTTAGAAATTTGGGTAAATTCACTTTTGCTG ACATTACTGCCTATCGTTTAGATGCAAAGCCTATTCGTATTATTTCTGCTATTTCTGCTTTGAGCGTTATAGTGTTTTAT CTCATTGCACAAATGGTTGGTGCAGGACAGCTTATACAGGTGCTTTTTGGTTTACCTTATAGTGTAGCAGTGGTGCTTGT GGGAATCTTAATGATTTGCTATGTCGTTTTTGGTGGAATGCACGCTACAACTTGGGTGCAAATTATTAAAGCAGTGTTGC TTTTAGCAGGTGCAAGTTTTATGGCAATTATGATTTTGTATTTGACAAAATTTGACTTAAGCTACTACTTCTCACAGGCG GTTTCACATCACCCTAAAGGAGAATCTATTATGTCGCCTGGAGGTTTTTTACCTGATAGTATTTCTGCAGTATCGCTTGG GTTAGCTCTTATGTTTGGAACAGCAGGATTGCCTCATATTTTAATGAGATTTTTCACGGTAAAAGATGCCAAAGAAGCTC GTAAATCTGTATTTTATGCAACAGGGTTAATTGGATATTTTTATATTCTAACTTTCATCATTGGTTTTGGTGCAATTGCA CTTTTACTTGGGAATCCAGATTATACAGATGCAAATGGTGCTTATAATGGTGTTACAAATATGGTTGCTGTAAATCTTGC TTCTGTGCTTGGCGGAGATTTCTTCTATGGCTTTATTTGTGCGGTGGCATTTGCTACAATTTTGGCAGTTGTTTCTGGAT TGGCAATTACAGGTGCAGGTGCAATCAGCCACGATTTGTTTGTCAATGTTTGTAAAAATGGACAATGTGATCCTGCACTT GAAATGAGAGTAACTAAAATCGCTACAATTTGTATTGGAATATGTGCAATTGCACTTGGCATTGTATTTGAAAAGCAAAA TGTTGCTTTCACCGTTGGATTAGCTTTTGCGATTGCTGCAAGCGTGAATTTTCCTATTTTGCTTTTGTGTATTTATTGGA AAAACCTCACCACAAAGGGTGCATTTTGGGGCGGACTTATAGGGCTTATAGTGGTGCTTACACTTGTAATTTTAAGTCCT AGTATTTGGGTGAAAAGCTTTGGTTTTGAAAGTGCGATTTTCCCTTATGATCACCCTGCGATTTTTACTATGCCACTTAC CTTTATCCTTATTTTTATTATTTCAAAGTTGGATAATTCTAAACGAGCACAAATTGATAGAGCAGGTTTTGAAGCACAGG ATTTCCGTGCGCAAAGCGGTATAGGAGCAAGTGAGGCTGTAGCACATTAA
Upstream 100 bases:
>100_bases TGCTTGAGCAATTAGAAAAAAATGGTGTGCTTGAAGCACTTAAAAGTGGCGAGATTCACTATAAAGAGCAAGCAGCTGAA ACAGAAAAGGAGGAAAAGTA
Downstream 100 bases:
>100_bases TTATAGAGTTAGAATCCCGCTACATAGTGCGGATTCTAGCAATTTCATCTCTTAATCTTGCCGCCTCTTCAAACTCAAGT GCTTTAGCTGCTTGGTGCAT
Product: acetate permease
Products: NA
Alternate protein names: Acetate permease; Acetate transporter ActP [H]
Number of amino acids: Translated: 549; Mature: 549
Protein sequence:
>549_residues MKSLFFSLSLLSVNSLFGASIDFGGAKSDINPIAIGMFLAFVLATLFITYLSNKKSQSASGFYTAGGNITGMQNGVAIAG DYMSAASFLGITALVFTNGFDGLIYSIGFLAGWPIILFLIAEKFRNLGKFTFADITAYRLDAKPIRIISAISALSVIVFY LIAQMVGAGQLIQVLFGLPYSVAVVLVGILMICYVVFGGMHATTWVQIIKAVLLLAGASFMAIMILYLTKFDLSYYFSQA VSHHPKGESIMSPGGFLPDSISAVSLGLALMFGTAGLPHILMRFFTVKDAKEARKSVFYATGLIGYFYILTFIIGFGAIA LLLGNPDYTDANGAYNGVTNMVAVNLASVLGGDFFYGFICAVAFATILAVVSGLAITGAGAISHDLFVNVCKNGQCDPAL EMRVTKIATICIGICAIALGIVFEKQNVAFTVGLAFAIAASVNFPILLLCIYWKNLTTKGAFWGGLIGLIVVLTLVILSP SIWVKSFGFESAIFPYDHPAIFTMPLTFILIFIISKLDNSKRAQIDRAGFEAQDFRAQSGIGASEAVAH
Sequences:
>Translated_549_residues MKSLFFSLSLLSVNSLFGASIDFGGAKSDINPIAIGMFLAFVLATLFITYLSNKKSQSASGFYTAGGNITGMQNGVAIAG DYMSAASFLGITALVFTNGFDGLIYSIGFLAGWPIILFLIAEKFRNLGKFTFADITAYRLDAKPIRIISAISALSVIVFY LIAQMVGAGQLIQVLFGLPYSVAVVLVGILMICYVVFGGMHATTWVQIIKAVLLLAGASFMAIMILYLTKFDLSYYFSQA VSHHPKGESIMSPGGFLPDSISAVSLGLALMFGTAGLPHILMRFFTVKDAKEARKSVFYATGLIGYFYILTFIIGFGAIA LLLGNPDYTDANGAYNGVTNMVAVNLASVLGGDFFYGFICAVAFATILAVVSGLAITGAGAISHDLFVNVCKNGQCDPAL EMRVTKIATICIGICAIALGIVFEKQNVAFTVGLAFAIAASVNFPILLLCIYWKNLTTKGAFWGGLIGLIVVLTLVILSP SIWVKSFGFESAIFPYDHPAIFTMPLTFILIFIISKLDNSKRAQIDRAGFEAQDFRAQSGIGASEAVAH >Mature_549_residues MKSLFFSLSLLSVNSLFGASIDFGGAKSDINPIAIGMFLAFVLATLFITYLSNKKSQSASGFYTAGGNITGMQNGVAIAG DYMSAASFLGITALVFTNGFDGLIYSIGFLAGWPIILFLIAEKFRNLGKFTFADITAYRLDAKPIRIISAISALSVIVFY LIAQMVGAGQLIQVLFGLPYSVAVVLVGILMICYVVFGGMHATTWVQIIKAVLLLAGASFMAIMILYLTKFDLSYYFSQA VSHHPKGESIMSPGGFLPDSISAVSLGLALMFGTAGLPHILMRFFTVKDAKEARKSVFYATGLIGYFYILTFIIGFGAIA LLLGNPDYTDANGAYNGVTNMVAVNLASVLGGDFFYGFICAVAFATILAVVSGLAITGAGAISHDLFVNVCKNGQCDPAL EMRVTKIATICIGICAIALGIVFEKQNVAFTVGLAFAIAASVNFPILLLCIYWKNLTTKGAFWGGLIGLIVVLTLVILSP SIWVKSFGFESAIFPYDHPAIFTMPLTFILIFIISKLDNSKRAQIDRAGFEAQDFRAQSGIGASEAVAH
Specific function: Transports acetate [H]
COG id: COG4147
COG function: function code R; Predicted symporter
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family [H]
Homologues:
Organism=Homo sapiens, GI310128183, Length=468, Percent_Identity=22.8632478632479, Blast_Score=77, Evalue=6e-14, Organism=Escherichia coli, GI1790503, Length=523, Percent_Identity=62.7151051625239, Blast_Score=652, Evalue=0.0, Organism=Escherichia coli, GI87082237, Length=436, Percent_Identity=21.7889908256881, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1787251, Length=465, Percent_Identity=23.4408602150538, Blast_Score=70, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014083 - InterPro: IPR001734 - InterPro: IPR018212 - InterPro: IPR019900 [H]
Pfam domain/function: PF00474 SSF [H]
EC number: NA
Molecular weight: Translated: 58558; Mature: 58558
Theoretical pI: Translated: 8.43; Mature: 8.43
Prosite motif: PS00456 NA_SOLUT_SYMP_1 ; PS50283 NA_SOLUT_SYMP_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSLFFSLSLLSVNSLFGASIDFGGAKSDINPIAIGMFLAFVLATLFITYLSNKKSQSAS CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC GFYTAGGNITGMQNGVAIAGDYMSAASFLGITALVFTNGFDGLIYSIGFLAGWPIILFLI CEEECCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH AEKFRNLGKFTFADITAYRLDAKPIRIISAISALSVIVFYLIAQMVGAGQLIQVLFGLPY HHHHHHCCCEEHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCH SVAVVLVGILMICYVVFGGMHATTWVQIIKAVLLLAGASFMAIMILYLTKFDLSYYFSQA HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH VSHHPKGESIMSPGGFLPDSISAVSLGLALMFGTAGLPHILMRFFTVKDAKEARKSVFYA HHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH TGLIGYFYILTFIIGFGAIALLLGNPDYTDANGAYNGVTNMVAVNLASVLGGDFFYGFIC HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH AVAFATILAVVSGLAITGAGAISHDLFVNVCKNGQCDPALEMRVTKIATICIGICAIALG HHHHHHHHHHHHCHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH IVFEKQNVAFTVGLAFAIAASVNFPILLLCIYWKNLTTKGAFWGGLIGLIVVLTLVILSP HHEECCCCEEEHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCC SIWVKSFGFESAIFPYDHPAIFTMPLTFILIFIISKLDNSKRAQIDRAGFEAQDFRAQSG HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHCC IGASEAVAH CCHHHHCCC >Mature Secondary Structure MKSLFFSLSLLSVNSLFGASIDFGGAKSDINPIAIGMFLAFVLATLFITYLSNKKSQSAS CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC GFYTAGGNITGMQNGVAIAGDYMSAASFLGITALVFTNGFDGLIYSIGFLAGWPIILFLI CEEECCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH AEKFRNLGKFTFADITAYRLDAKPIRIISAISALSVIVFYLIAQMVGAGQLIQVLFGLPY HHHHHHCCCEEHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCH SVAVVLVGILMICYVVFGGMHATTWVQIIKAVLLLAGASFMAIMILYLTKFDLSYYFSQA HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH VSHHPKGESIMSPGGFLPDSISAVSLGLALMFGTAGLPHILMRFFTVKDAKEARKSVFYA HHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH TGLIGYFYILTFIIGFGAIALLLGNPDYTDANGAYNGVTNMVAVNLASVLGGDFFYGFIC HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH AVAFATILAVVSGLAITGAGAISHDLFVNVCKNGQCDPALEMRVTKIATICIGICAIALG HHHHHHHHHHHHCHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH IVFEKQNVAFTVGLAFAIAASVNFPILLLCIYWKNLTTKGAFWGGLIGLIVVLTLVILSP HHEECCCCEEEHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCC SIWVKSFGFESAIFPYDHPAIFTMPLTFILIFIISKLDNSKRAQIDRAGFEAQDFRAQSG HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHCC IGASEAVAH CCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA