Click here to switch to the map view.

The map label for this gene is yjcH [C]

Identifier: 32267045

GI number: 32267045

Start: 1481826

End: 1482209

Strand: Direct

Name: yjcH [C]

Synonym: HH1546

Alternate gene names: 32267045

Gene position: 1481826-1482209 (Clockwise)

Preceding gene: 32267043

Following gene: 32267046

Centisome position: 82.36

GC content: 33.07

Gene sequence:

>384_bases
ATGAAGCTATCTGAAAATCAGCAAAAGGCAGTTGTAAAGTTTAGAAATTTTATTGCTTTTAGAAATAAAATTTCACTTAT
CTTATCACTTGTTGTTTTGGTTTGTTATTATGTATTTGTAATAGGTGTGGGGCTTTTCCCCGAAGTATTGGGCTATCGTT
TAGGTCCTAGCTCTATTACACTTGGTATTATACTAGGAATTTTTCTTATTGCGCTTTGTATTATTGCCACAGGGCTTTAT
ACATTTTTGGCAAATACTTATTTTGATAAAGACCAAAATGAAGTGCTTGAGCAATTAGAAAAAAATGGTGTGCTTGAAGC
ACTTAAAAGTGGCGAGATTCACTATAAAGAGCAAGCAGCTGAAACAGAAAAGGAGGAAAAGTAA

Upstream 100 bases:

>100_bases
TTACTTTTAGTTTCATATATTTTTTTAGTATAAATATATGTTACCTTTTGCACAAGCTTTTGAGTAATGGGATTAACGTA
AATAAATTTAGGAGGAGAGT

Downstream 100 bases:

>100_bases
TGAAAAGTTTATTTTTTAGCTTAAGCTTATTAAGTGTAAATTCGCTTTTTGGTGCATCTATTGATTTTGGTGGTGCAAAA
TCAGACATTAATCCAATAGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MKLSENQQKAVVKFRNFIAFRNKISLILSLVVLVCYYVFVIGVGLFPEVLGYRLGPSSITLGIILGIFLIALCIIATGLY
TFLANTYFDKDQNEVLEQLEKNGVLEALKSGEIHYKEQAAETEKEEK

Sequences:

>Translated_127_residues
MKLSENQQKAVVKFRNFIAFRNKISLILSLVVLVCYYVFVIGVGLFPEVLGYRLGPSSITLGIILGIFLIALCIIATGLY
TFLANTYFDKDQNEVLEQLEKNGVLEALKSGEIHYKEQAAETEKEEK
>Mature_127_residues
MKLSENQQKAVVKFRNFIAFRNKISLILSLVVLVCYYVFVIGVGLFPEVLGYRLGPSSITLGIILGIFLIALCIIATGLY
TFLANTYFDKDQNEVLEQLEKNGVLEALKSGEIHYKEQAAETEKEEK

Specific function: Unknown

COG id: COG3162

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790504, Length=91, Percent_Identity=34.0659340659341, Blast_Score=61, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14294; Mature: 14294

Theoretical pI: Translated: 5.90; Mature: 5.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLSENQQKAVVKFRNFIAFRNKISLILSLVVLVCYYVFVIGVGLFPEVLGYRLGPSSIT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
LGIILGIFLIALCIIATGLYTFLANTYFDKDQNEVLEQLEKNGVLEALKSGEIHYKEQAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
ETEKEEK
HHHCCCC
>Mature Secondary Structure
MKLSENQQKAVVKFRNFIAFRNKISLILSLVVLVCYYVFVIGVGLFPEVLGYRLGPSSIT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
LGIILGIFLIALCIIATGLYTFLANTYFDKDQNEVLEQLEKNGVLEALKSGEIHYKEQAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
ETEKEEK
HHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA