| Definition | Helicobacter hepaticus ATCC 51449 chromosome, complete genome. |
|---|---|
| Accession | NC_004917 |
| Length | 1,799,146 |
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The map label for this gene is thiE [H]
Identifier: 32266997
GI number: 32266997
Start: 1435161
End: 1435760
Strand: Direct
Name: thiE [H]
Synonym: HH1498
Alternate gene names: 32266997
Gene position: 1435161-1435760 (Clockwise)
Preceding gene: 32266996
Following gene: 32266999
Centisome position: 79.77
GC content: 34.83
Gene sequence:
>600_bases ATGAAGAACACTGATTTTATTACACTTCTTATTACGCCTCATATTAATGGGGCATATCTTGAGAATCTTCAGCTTAAAAT ACAATCTTTGTCTGTTGATTGGATTATGTATCGTCATCAAAATAGTGAATGGATAGAATCTTTTACACAATCTTTATCAT TCTTGCATAAACCTCTTTTGCTCAATATTCCTTTTAAAAACACAGAAGAGATATTGCAATTATCAAAAGACTTTGCAGGT GTGCATTTAAAGTCAATATATCTTTCTTGGATTACTCCCTTAAGAGAATCTTATCTTGCCTTAGGTGAAAAAAAAATCAT TGGATATAGCGCGCATAGTATAGATGAGGTAACATATGCTTTGGCGTGTGGGGCAGATTATTGCACACTTAGTCCAATAT TTTCTACGCCAAATAAAGGCACACCATTAGGTATGGAAGTCTTTTATCAGATTCCGAAATCTTTGCGTTCGCGCATTATC GCACTTGGTGGTATTAATAATTATCATATCCCACTTCTTAAGGAGTTAGGATTACTTGGTTTTGCTGGAATCCGTTGTTT TGAGGAAACTAACGAGAATCATCGTGGAGTTGCGGATTAA
Upstream 100 bases:
>100_bases CCTGTTGCTCCTTTTGCAATTCTTACTTTTATGGCATTACTTCAGGCTTTTGTGTTTATGATACTTACTTATGTGTATAT TCACGGCGCAGTGGTCGTGG
Downstream 100 bases:
>100_bases AAATTCGCCAAGCTATTGAGTAATCAAAAAGTTCTTTATAAGTAGAGCTAAAAGCCTTTTTGTAAGGTGTAAGATGTATT TGCGTATCAGTAGAGAGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: TMP pyrophosphorylase; TMP-PPase; Thiamine-phosphate synthase [H]
Number of amino acids: Translated: 199; Mature: 199
Protein sequence:
>199_residues MKNTDFITLLITPHINGAYLENLQLKIQSLSVDWIMYRHQNSEWIESFTQSLSFLHKPLLLNIPFKNTEEILQLSKDFAG VHLKSIYLSWITPLRESYLALGEKKIIGYSAHSIDEVTYALACGADYCTLSPIFSTPNKGTPLGMEVFYQIPKSLRSRII ALGGINNYHIPLLKELGLLGFAGIRCFEETNENHRGVAD
Sequences:
>Translated_199_residues MKNTDFITLLITPHINGAYLENLQLKIQSLSVDWIMYRHQNSEWIESFTQSLSFLHKPLLLNIPFKNTEEILQLSKDFAG VHLKSIYLSWITPLRESYLALGEKKIIGYSAHSIDEVTYALACGADYCTLSPIFSTPNKGTPLGMEVFYQIPKSLRSRII ALGGINNYHIPLLKELGLLGFAGIRCFEETNENHRGVAD >Mature_199_residues MKNTDFITLLITPHINGAYLENLQLKIQSLSVDWIMYRHQNSEWIESFTQSLSFLHKPLLLNIPFKNTEEILQLSKDFAG VHLKSIYLSWITPLRESYLALGEKKIIGYSAHSIDEVTYALACGADYCTLSPIFSTPNKGTPLGMEVFYQIPKSLRSRII ALGGINNYHIPLLKELGLLGFAGIRCFEETNENHRGVAD
Specific function: Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) [H]
COG id: COG0352
COG function: function code H; Thiamine monophosphate synthase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TMP-PPase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR022998 - InterPro: IPR003733 [H]
Pfam domain/function: PF02581 TMP-TENI [H]
EC number: =2.5.1.3 [H]
Molecular weight: Translated: 22532; Mature: 22532
Theoretical pI: Translated: 6.88; Mature: 6.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNTDFITLLITPHINGAYLENLQLKIQSLSVDWIMYRHQNSEWIESFTQSLSFLHKPLL CCCCCEEEEEEECCCCCHHHHHEEEEEEEECEEEEEEECCCCHHHHHHHHHHHHHCCCEE LNIPFKNTEEILQLSKDFAGVHLKSIYLSWITPLRESYLALGEKKIIGYSAHSIDEVTYA EECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHH LACGADYCTLSPIFSTPNKGTPLGMEVFYQIPKSLRSRIIALGGINNYHIPLLKELGLLG HHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEECCCCCCCCHHHHHCCHHH FAGIRCFEETNENHRGVAD HHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MKNTDFITLLITPHINGAYLENLQLKIQSLSVDWIMYRHQNSEWIESFTQSLSFLHKPLL CCCCCEEEEEEECCCCCHHHHHEEEEEEEECEEEEEEECCCCHHHHHHHHHHHHHCCCEE LNIPFKNTEEILQLSKDFAGVHLKSIYLSWITPLRESYLALGEKKIIGYSAHSIDEVTYA EECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHH LACGADYCTLSPIFSTPNKGTPLGMEVFYQIPKSLRSRIIALGGINNYHIPLLKELGLLG HHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEECCCCCCCCHHHHHCCHHH FAGIRCFEETNENHRGVAD HHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA