| Definition | Helicobacter hepaticus ATCC 51449 chromosome, complete genome. |
|---|---|
| Accession | NC_004917 |
| Length | 1,799,146 |
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The map label for this gene is 32266999
Identifier: 32266999
GI number: 32266999
Start: 1437912
End: 1438781
Strand: Direct
Name: 32266999
Synonym: HH1500
Alternate gene names: NA
Gene position: 1437912-1438781 (Clockwise)
Preceding gene: 32266997
Following gene: 32267000
Centisome position: 79.92
GC content: 34.37
Gene sequence:
>870_bases ATGTCTCCATCTAAAAATACACCTTTTTTTATTGCTGTGGCTCTTATGGCAGAATGTTTTATTATTTATGCAAGTGTGCT TGTCAAACTCACAGATATGTCACCGCTTAATTTGGCATTTTATAGAATCATTCTTGCCTTGCCTATTTTTTGGTTTATGG CTCATTTAAAACATAATATATTTAGTATTCCGTTGAAAGATATTTCTTTAATGTTTGTGGCGGGTGTATTTTTTGCTTTT GATTTGCTTTTTTTCAACCTTGCTTTGCGGCATACAAGTGTAGCAAATGTTAATCTTTTTGCTTCTCTTGCGTGTTTTAT TCTTATACCTATTGGCATTATTTTTTTTAAAGAGAAAATTAAAAAGAGCTTTTTCTTTGGCGGGTTTGTGGCAATTATTG GTGTATTTGTGCTTATGGGTGGTAAAGGAGCACTAAGTGTGGCAACACCTTATGGAGATTTTATGGCATTTTTGAGTGTG TTGTGTTATAGCTGTTTTTTGGGTGTGATTTACTCACTACGGCGCAAATATGGCACATTTGAGATTATGCTTTTTGCCTG TGTGGGTTCAAGCATCGTGCTTTTAGCTTTAGTGCTTATTTTTGAAGGTTTTGAAGTGCCAAAGGATACCAAAGATTGGG GTATAGTGGTGCTTATTGCTCTTTGCGGACAAGTAATAGGGCAAGGATTCTTTAATTATATTATGGGCAAAGTCAATACT CAAACTTCCTCATTTTTACTGCTTTTTGCTCCTGTGATTGCTGCTTTTATGGGCTTTTTGTTCTTAGGAGAGCATCTTGG TATATATGAAATATGTGGCATTGTAATTATTATTTTTGGCGTGTATATAGCAAAGAGAGAAAATTATTAA
Upstream 100 bases:
>100_bases GCCATATAAACCCCTCTCCAATTTAAACAATATATTATAGCATAAATTTGTATGGGTGTTTGTGCTATAATATAGCCCTT AACCCTCTTAAGGATAGATG
Downstream 100 bases:
>100_bases TTTTACCTTGAGCGTAAAAGGATTGATTTACCCTTGACTTTTGTTTTTTTTTTTTTTTGTATAATCAAATTCCAGCATTA AGGATTTAATCCAATGCGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 289; Mature: 288
Protein sequence:
>289_residues MSPSKNTPFFIAVALMAECFIIYASVLVKLTDMSPLNLAFYRIILALPIFWFMAHLKHNIFSIPLKDISLMFVAGVFFAF DLLFFNLALRHTSVANVNLFASLACFILIPIGIIFFKEKIKKSFFFGGFVAIIGVFVLMGGKGALSVATPYGDFMAFLSV LCYSCFLGVIYSLRRKYGTFEIMLFACVGSSIVLLALVLIFEGFEVPKDTKDWGIVVLIALCGQVIGQGFFNYIMGKVNT QTSSFLLLFAPVIAAFMGFLFLGEHLGIYEICGIVIIIFGVYIAKRENY
Sequences:
>Translated_289_residues MSPSKNTPFFIAVALMAECFIIYASVLVKLTDMSPLNLAFYRIILALPIFWFMAHLKHNIFSIPLKDISLMFVAGVFFAF DLLFFNLALRHTSVANVNLFASLACFILIPIGIIFFKEKIKKSFFFGGFVAIIGVFVLMGGKGALSVATPYGDFMAFLSV LCYSCFLGVIYSLRRKYGTFEIMLFACVGSSIVLLALVLIFEGFEVPKDTKDWGIVVLIALCGQVIGQGFFNYIMGKVNT QTSSFLLLFAPVIAAFMGFLFLGEHLGIYEICGIVIIIFGVYIAKRENY >Mature_288_residues SPSKNTPFFIAVALMAECFIIYASVLVKLTDMSPLNLAFYRIILALPIFWFMAHLKHNIFSIPLKDISLMFVAGVFFAFD LLFFNLALRHTSVANVNLFASLACFILIPIGIIFFKEKIKKSFFFGGFVAIIGVFVLMGGKGALSVATPYGDFMAFLSVL CYSCFLGVIYSLRRKYGTFEIMLFACVGSSIVLLALVLIFEGFEVPKDTKDWGIVVLIALCGQVIGQGFFNYIMGKVNTQ TSSFLLLFAPVIAAFMGFLFLGEHLGIYEICGIVIIIFGVYIAKRENY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32129; Mature: 31998
Theoretical pI: Translated: 8.64; Mature: 8.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPSKNTPFFIAVALMAECFIIYASVLVKLTDMSPLNLAFYRIILALPIFWFMAHLKHNI CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH FSIPLKDISLMFVAGVFFAFDLLFFNLALRHTSVANVNLFASLACFILIPIGIIFFKEKI HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH KKSFFFGGFVAIIGVFVLMGGKGALSVATPYGDFMAFLSVLCYSCFLGVIYSLRRKYGTF HHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH EIMLFACVGSSIVLLALVLIFEGFEVPKDTKDWGIVVLIALCGQVIGQGFFNYIMGKVNT HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC QTSSFLLLFAPVIAAFMGFLFLGEHLGIYEICGIVIIIFGVYIAKRENY CHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SPSKNTPFFIAVALMAECFIIYASVLVKLTDMSPLNLAFYRIILALPIFWFMAHLKHNI CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH FSIPLKDISLMFVAGVFFAFDLLFFNLALRHTSVANVNLFASLACFILIPIGIIFFKEKI HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH KKSFFFGGFVAIIGVFVLMGGKGALSVATPYGDFMAFLSVLCYSCFLGVIYSLRRKYGTF HHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH EIMLFACVGSSIVLLALVLIFEGFEVPKDTKDWGIVVLIALCGQVIGQGFFNYIMGKVNT HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC QTSSFLLLFAPVIAAFMGFLFLGEHLGIYEICGIVIIIFGVYIAKRENY CHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA