| Definition | Helicobacter hepaticus ATCC 51449 chromosome, complete genome. |
|---|---|
| Accession | NC_004917 |
| Length | 1,799,146 |
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The map label for this gene is gltK
Identifier: 32266982
GI number: 32266982
Start: 1421750
End: 1422409
Strand: Direct
Name: gltK
Synonym: HH1483
Alternate gene names: 32266982
Gene position: 1421750-1422409 (Clockwise)
Preceding gene: 32266981
Following gene: 32266989
Centisome position: 79.02
GC content: 34.09
Gene sequence:
>660_bases ATGGGAAATGTATTTAATCAATCAAATCTTCATTTTTTACTTGATGGGCTTTATCTAACGCTTGTTGTGGCATTAGCAAC TTGTGTGATTTCTATCATTTTTGGCACATTTTTAGCAATTACACGCAATTATGGTGGCAGGATTATAAGTTCTCTTGCAG CTATTTATATTGAAGTATTTAGAAATACACCTTTGCTTTTATGGATGCTTACTGCTGTTTTTGTTTTGCCGAGTTTTTTT GGACGAGCTGAACCTGCAATATGGGGAACTATTGGTTTTTCGCTTTATACAAGCTCGGTTATGGCAGAGATTATTCGCGG CGGGCTTAACTCTGTGCCTAAAGGACAATTTGAAGCAGCATATTCACAGGGTTTTAGCCAATTTTTTACACTTTTTTATA TTATTTTGCCTCAAACCTTTAGAAAAGTTATTCCTTCTATGCTTTCGCAGATTATTACGACTTTTAAAGATACTTCATTT TTGGCAGGATTGCAAATAGCAGAGCTTACTTATCAATCTAAGATTATATTAGCCCAACTAGCGAGTTTTCAAGAAATACT TGCTATGATTGGATTGATTGCAGGAGTGTATTTTGTGATTTGTTTTAGTCTTTCTGTGCTTGTGCGTTATCTTGATAAAA AAATGGCATATATTTCATAA
Upstream 100 bases:
>100_bases GCATTTTTATATTTTATCGTGTGCTATCCCTTAGCATATTTTGCGAAGTTTTATGAAGATAGACTTAAAACTGCTCACTT AAAGCGATAAGGAAGATATT
Downstream 100 bases:
>100_bases AGTTACTTATCAAAAAATGTAAGAGCTATGGCAGAGAGGAAGGGATTCGAACCCTCGAAAGCTTGCACTTTACACGCGTT CCAGGCGTGCTCCTTCAACC
Product: putative ABC-type amino-acid transporter permease protein
Products: ADP; phosphate; L-glutamate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 219; Mature: 218
Protein sequence:
>219_residues MGNVFNQSNLHFLLDGLYLTLVVALATCVISIIFGTFLAITRNYGGRIISSLAAIYIEVFRNTPLLLWMLTAVFVLPSFF GRAEPAIWGTIGFSLYTSSVMAEIIRGGLNSVPKGQFEAAYSQGFSQFFTLFYIILPQTFRKVIPSMLSQIITTFKDTSF LAGLQIAELTYQSKIILAQLASFQEILAMIGLIAGVYFVICFSLSVLVRYLDKKMAYIS
Sequences:
>Translated_219_residues MGNVFNQSNLHFLLDGLYLTLVVALATCVISIIFGTFLAITRNYGGRIISSLAAIYIEVFRNTPLLLWMLTAVFVLPSFF GRAEPAIWGTIGFSLYTSSVMAEIIRGGLNSVPKGQFEAAYSQGFSQFFTLFYIILPQTFRKVIPSMLSQIITTFKDTSF LAGLQIAELTYQSKIILAQLASFQEILAMIGLIAGVYFVICFSLSVLVRYLDKKMAYIS >Mature_218_residues GNVFNQSNLHFLLDGLYLTLVVALATCVISIIFGTFLAITRNYGGRIISSLAAIYIEVFRNTPLLLWMLTAVFVLPSFFG RAEPAIWGTIGFSLYTSSVMAEIIRGGLNSVPKGQFEAAYSQGFSQFFTLFYIILPQTFRKVIPSMLSQIITTFKDTSFL AGLQIAELTYQSKIILAQLASFQEILAMIGLIAGVYFVICFSLSVLVRYLDKKMAYIS
Specific function: Part of the ABC transporter complex glnHMPQ involved in glutamine transport. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0765
COG function: function code E; ABC-type amino acid transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786873, Length=216, Percent_Identity=33.7962962962963, Blast_Score=113, Evalue=1e-26, Organism=Escherichia coli, GI87082239, Length=205, Percent_Identity=33.6585365853659, Blast_Score=102, Evalue=2e-23, Organism=Escherichia coli, GI1787030, Length=206, Percent_Identity=31.0679611650485, Blast_Score=102, Evalue=2e-23, Organism=Escherichia coli, GI1788226, Length=208, Percent_Identity=31.25, Blast_Score=98, Evalue=4e-22, Organism=Escherichia coli, GI1786874, Length=200, Percent_Identity=25, Blast_Score=85, Evalue=4e-18, Organism=Escherichia coli, GI48994930, Length=131, Percent_Identity=33.587786259542, Blast_Score=77, Evalue=7e-16, Organism=Escherichia coli, GI1787087, Length=131, Percent_Identity=26.7175572519084, Blast_Score=65, Evalue=5e-12, Organism=Escherichia coli, GI1788645, Length=211, Percent_Identity=27.4881516587678, Blast_Score=62, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 24331; Mature: 24200
Theoretical pI: Translated: 9.27; Mature: 9.27
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNVFNQSNLHFLLDGLYLTLVVALATCVISIIFGTFLAITRNYGGRIISSLAAIYIEVF CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH RNTPLLLWMLTAVFVLPSFFGRAEPAIWGTIGFSLYTSSVMAEIIRGGLNSVPKGQFEAA HCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH YSQGFSQFFTLFYIILPQTFRKVIPSMLSQIITTFKDTSFLAGLQIAELTYQSKIILAQL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASFQEILAMIGLIAGVYFVICFSLSVLVRYLDKKMAYIS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure GNVFNQSNLHFLLDGLYLTLVVALATCVISIIFGTFLAITRNYGGRIISSLAAIYIEVF CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH RNTPLLLWMLTAVFVLPSFFGRAEPAIWGTIGFSLYTSSVMAEIIRGGLNSVPKGQFEAA HCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH YSQGFSQFFTLFYIILPQTFRKVIPSMLSQIITTFKDTSFLAGLQIAELTYQSKIILAQL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASFQEILAMIGLIAGVYFVICFSLSVLVRYLDKKMAYIS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-glutamate [Periplasm]; H2O [C]
Specific reaction: ATP + L-glutamate [Periplasm] + H2O = ADP + phosphate + L-glutamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7551042; 9384377 [H]