| Definition | Helicobacter hepaticus ATCC 51449 chromosome, complete genome. |
|---|---|
| Accession | NC_004917 |
| Length | 1,799,146 |
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The map label for this gene is yccK [H]
Identifier: 32266961
GI number: 32266961
Start: 1405284
End: 1406444
Strand: Direct
Name: yccK [H]
Synonym: HH1462
Alternate gene names: 32266961
Gene position: 1405284-1406444 (Clockwise)
Preceding gene: 32266960
Following gene: 32266963
Centisome position: 78.11
GC content: 41.69
Gene sequence:
>1161_bases ATGAAAGAAAAATCAGCAAAAGCTTCAAGACGAGAGTTTTTAAAAACAAGTGCAGCACTTGCTACAATGGCATTTTTTAG CTCTAGTGCGTTTGCAAAAGATTCTAAAGAATCTACTCAAGCACGCAAAGAGAGCACAAATACAAAGAATCGTGTAATTC TACAAAGAAAAATTGGCGATTTCAAAGTCTCCGCGATTGGCTTAGGTTGTATGGGAATGAGTGCCAATCACGGACCTACA AGGGATAAAAAAGAAATGATAAAGCTGCTGCATAAAGCGGTGGATTTGGGATATACATTCTTTGATACCGCTGAAGTGTA TGGACCACATACCAATGAGGAGCTTTTGGGCGAGGCTTTGAAAGGTTATAAAGACAAAATCGTCATCAATACCAAATTTG GCTTTTACTATCCCTTTGGCAAACAACAGCTAGATTCTAGTCGCAAGTCTATTATGCGCGCAGTTGATGGGAGCTTGAAA CGTTTAAAAAGGGATTGTATTGACCTCTACACGCAGCATAGAGTGGATATTGACACGCCTATTGAGGAAGTGGCAGGGAC GATGAAAGATTTAGTCAAAATGGGCAAAATCAAAGCGTGGGCGTTAGGCGAAGCAGGGATTAAGACAATAGAGAGGGCGC ACAAAGTCTTTGCCCCTGTGGCAATGCAGAGTCAATACTCTATGGCATTCCGTGAATTAGAGCAAAATGGCATAATGGAT ACTTGCCAAAAGCTAGGAATCACGATTGTCGCTTATTCTCCGCTTGATAGAGGATTTTTAGGTGGAAGCTTTAATAAAAA CACGACTTTTCACAAAACGCTTGATTTCCGCGCGTCTATGCCACGTTACACCAAAGAAGCCCTAGAGGCAAATCAAAGTG TGATTGAGTTTATCAAAAAGGTAGCGCAGAGTAAAAGCATTAATGGCAAACCAGCAAGTGTCGCACAAGTCGCCTTAGCG TGGATTCTCTCTAACAAAAGCTTTGTCATTCCAATCCCTGAAACCACGAAAATCCACAGACTAGAGGAGAATCTTAACGC AAGTTTATTGCACTTTAGCCTTAACGAGCTAAAAGAAATCAATAAGGAATTAAGCAAGATTGTCATCATAGGGGATAGAT ACGCACCCAATAGCGATGCGGCAAAGAGCGTGGGGCTGTAG
Upstream 100 bases:
>100_bases TCGGCTACCCTAGAAGCTTAAACGCCCTAAGTGCGCTTGATGAGATTGCGCCGTTGTAGTAATAGGGAAATAAATGATAG CAAACATACAAGGAAATACA
Downstream 100 bases:
>100_bases ATTTTAAATCTTATTTGCCCCTTGACAAATACTAAGTGTAAGGATTTATACTATTATTTTATCTTGAAAGGGGCAAATAT ACAAAAATCACACGAAAAAT
Product: aldo-keto reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 386; Mature: 386
Protein sequence:
>386_residues MKEKSAKASRREFLKTSAALATMAFFSSSAFAKDSKESTQARKESTNTKNRVILQRKIGDFKVSAIGLGCMGMSANHGPT RDKKEMIKLLHKAVDLGYTFFDTAEVYGPHTNEELLGEALKGYKDKIVINTKFGFYYPFGKQQLDSSRKSIMRAVDGSLK RLKRDCIDLYTQHRVDIDTPIEEVAGTMKDLVKMGKIKAWALGEAGIKTIERAHKVFAPVAMQSQYSMAFRELEQNGIMD TCQKLGITIVAYSPLDRGFLGGSFNKNTTFHKTLDFRASMPRYTKEALEANQSVIEFIKKVAQSKSINGKPASVAQVALA WILSNKSFVIPIPETTKIHRLEENLNASLLHFSLNELKEINKELSKIVIIGDRYAPNSDAAKSVGL
Sequences:
>Translated_386_residues MKEKSAKASRREFLKTSAALATMAFFSSSAFAKDSKESTQARKESTNTKNRVILQRKIGDFKVSAIGLGCMGMSANHGPT RDKKEMIKLLHKAVDLGYTFFDTAEVYGPHTNEELLGEALKGYKDKIVINTKFGFYYPFGKQQLDSSRKSIMRAVDGSLK RLKRDCIDLYTQHRVDIDTPIEEVAGTMKDLVKMGKIKAWALGEAGIKTIERAHKVFAPVAMQSQYSMAFRELEQNGIMD TCQKLGITIVAYSPLDRGFLGGSFNKNTTFHKTLDFRASMPRYTKEALEANQSVIEFIKKVAQSKSINGKPASVAQVALA WILSNKSFVIPIPETTKIHRLEENLNASLLHFSLNELKEINKELSKIVIIGDRYAPNSDAAKSVGL >Mature_386_residues MKEKSAKASRREFLKTSAALATMAFFSSSAFAKDSKESTQARKESTNTKNRVILQRKIGDFKVSAIGLGCMGMSANHGPT RDKKEMIKLLHKAVDLGYTFFDTAEVYGPHTNEELLGEALKGYKDKIVINTKFGFYYPFGKQQLDSSRKSIMRAVDGSLK RLKRDCIDLYTQHRVDIDTPIEEVAGTMKDLVKMGKIKAWALGEAGIKTIERAHKVFAPVAMQSQYSMAFRELEQNGIMD TCQKLGITIVAYSPLDRGFLGGSFNKNTTFHKTLDFRASMPRYTKEALEANQSVIEFIKKVAQSKSINGKPASVAQVALA WILSNKSFVIPIPETTKIHRLEENLNASLLHFSLNELKEINKELSKIVIIGDRYAPNSDAAKSVGL
Specific function: Unknown
COG id: COG0667
COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase 2 family [H]
Homologues:
Organism=Homo sapiens, GI27436964, Length=354, Percent_Identity=27.1186440677966, Blast_Score=96, Evalue=6e-20, Organism=Homo sapiens, GI27436966, Length=342, Percent_Identity=26.6081871345029, Blast_Score=96, Evalue=7e-20, Organism=Homo sapiens, GI27436962, Length=334, Percent_Identity=26.6467065868263, Blast_Score=95, Evalue=1e-19, Organism=Homo sapiens, GI27436969, Length=335, Percent_Identity=25.0746268656716, Blast_Score=94, Evalue=2e-19, Organism=Homo sapiens, GI4504825, Length=320, Percent_Identity=25.3125, Blast_Score=92, Evalue=1e-18, Organism=Homo sapiens, GI27436971, Length=306, Percent_Identity=25.1633986928105, Blast_Score=84, Evalue=3e-16, Organism=Escherichia coli, GI87081735, Length=326, Percent_Identity=28.8343558282209, Blast_Score=140, Evalue=9e-35, Organism=Escherichia coli, GI1789375, Length=313, Percent_Identity=30.3514376996805, Blast_Score=132, Evalue=5e-32, Organism=Escherichia coli, GI1788081, Length=309, Percent_Identity=25.5663430420712, Blast_Score=96, Evalue=3e-21, Organism=Escherichia coli, GI1788070, Length=315, Percent_Identity=26.6666666666667, Blast_Score=94, Evalue=1e-20, Organism=Escherichia coli, GI1787674, Length=319, Percent_Identity=27.2727272727273, Blast_Score=92, Evalue=4e-20, Organism=Escherichia coli, GI48994888, Length=288, Percent_Identity=24.3055555555556, Blast_Score=66, Evalue=4e-12, Organism=Saccharomyces cerevisiae, GI6325384, Length=338, Percent_Identity=26.3313609467456, Blast_Score=109, Evalue=6e-25, Organism=Saccharomyces cerevisiae, GI6325169, Length=346, Percent_Identity=26.0115606936416, Blast_Score=94, Evalue=3e-20, Organism=Saccharomyces cerevisiae, GI6323998, Length=285, Percent_Identity=24.5614035087719, Blast_Score=67, Evalue=6e-12, Organism=Saccharomyces cerevisiae, GI6319958, Length=285, Percent_Identity=24.9122807017544, Blast_Score=66, Evalue=9e-12, Organism=Saccharomyces cerevisiae, GI6319951, Length=337, Percent_Identity=22.5519287833828, Blast_Score=64, Evalue=4e-11, Organism=Drosophila melanogaster, GI45549126, Length=358, Percent_Identity=25.9776536312849, Blast_Score=70, Evalue=3e-12, Organism=Drosophila melanogaster, GI24646155, Length=157, Percent_Identity=35.031847133758, Blast_Score=69, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 43008; Mature: 43008
Theoretical pI: Translated: 10.20; Mature: 10.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEKSAKASRREFLKTSAALATMAFFSSSAFAKDSKESTQARKESTNTKNRVILQRKIGD CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHEEEEEECCCC FKVSAIGLGCMGMSANHGPTRDKKEMIKLLHKAVDLGYTFFDTAEVYGPHTNEELLGEAL EEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCHHCCCHHHCCCCCCHHHHHHHH KGYKDKIVINTKFGFYYPFGKQQLDSSRKSIMRAVDGSLKRLKRDCIDLYTQHRVDIDTP HCCCCEEEEEECCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC IEEVAGTMKDLVKMGKIKAWALGEAGIKTIERAHKVFAPVAMQSQYSMAFRELEQNGIMD HHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH TCQKLGITIVAYSPLDRGFLGGSFNKNTTFHKTLDFRASMPRYTKEALEANQSVIEFIKK HHHHCCEEEEEECCCCCCCCCCCCCCCCCEEEEECHHCCCCHHHHHHHHCCHHHHHHHHH VAQSKSINGKPASVAQVALAWILSNKSFVIPIPETTKIHRLEENLNASLLHFSLNELKEI HHHCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHH NKELSKIVIIGDRYAPNSDAAKSVGL HHHHHEEEEEECCCCCCCCCHHHCCC >Mature Secondary Structure MKEKSAKASRREFLKTSAALATMAFFSSSAFAKDSKESTQARKESTNTKNRVILQRKIGD CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHEEEEEECCCC FKVSAIGLGCMGMSANHGPTRDKKEMIKLLHKAVDLGYTFFDTAEVYGPHTNEELLGEAL EEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCHHCCCHHHCCCCCCHHHHHHHH KGYKDKIVINTKFGFYYPFGKQQLDSSRKSIMRAVDGSLKRLKRDCIDLYTQHRVDIDTP HCCCCEEEEEECCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC IEEVAGTMKDLVKMGKIKAWALGEAGIKTIERAHKVFAPVAMQSQYSMAFRELEQNGIMD HHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH TCQKLGITIVAYSPLDRGFLGGSFNKNTTFHKTLDFRASMPRYTKEALEANQSVIEFIKK HHHHCCEEEEEECCCCCCCCCCCCCCCCCEEEEECHHCCCCHHHHHHHHCCHHHHHHHHH VAQSKSINGKPASVAQVALAWILSNKSFVIPIPETTKIHRLEENLNASLLHFSLNELKEI HHHCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHH NKELSKIVIIGDRYAPNSDAAKSVGL HHHHHEEEEEECCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9274031; 9384377; 9106203 [H]