| Definition | Helicobacter hepaticus ATCC 51449 chromosome, complete genome. |
|---|---|
| Accession | NC_004917 |
| Length | 1,799,146 |
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The map label for this gene is qacA [H]
Identifier: 32266963
GI number: 32266963
Start: 1407211
End: 1408713
Strand: Direct
Name: qacA [H]
Synonym: HH1464
Alternate gene names: 32266963
Gene position: 1407211-1408713 (Clockwise)
Preceding gene: 32266961
Following gene: 32266964
Centisome position: 78.22
GC content: 41.18
Gene sequence:
>1503_bases ATGAATCTCATTCTTTTTACTATTCTACTTGCTGTATTTGTCGTGCCTAGCTCTATTTCTGGCACAGCTATTGCCTTACC CTATATCGCAGAGGATATTGGAAGTGATACCACGCTCTTACAATGGGTTGTGAATAGCTTTAATCTATTTTTTGCGTGTT TTACGCTCATTTGGGGTGCTATAAGTGATAGATTAGGTGCAAAAACTTGTCTTATTGCTGGGGTGGCAACCTATCTTTTA GGCTCAATACTCTCATTTCTCGCTCCTAGCCTACTTTGGCTTGATGTGGGTAGAGCCTTAGCGGGGATTGGTGGGGCAAG TGTTTTTGCGTGTGGAAGTGCTATTTTAATCCGCACTTTTGAAGACAAGGAACGAGTGAAAGCCTTTGCATTTTTTGGCA CAACCGCAGGGCTTGGCATTACCTTAGGACCCACATTAAGTGGATTCCTCATTGATCTTTTTGCGTGGAGGGCGATTTTT GTCTTTCATTTTCTCACACTTGGGGTTGTTTTGCTCCTTTCACCTATGTTGCCAAAAGACCCACAAAAACAACAAAAAGC CTTTAAGTTTGATAAAATGGGTGCACTTCTCTTTATCGCTTTTATGTCAAGCTTTATGCTTTTTATCACCAAAATCCACG CTTTCAAAGAGCCTCAAACACTTGGAATATTAGCCTTTTGTCTCATTGTAGGGATAGTTTTTGGGGTGCATCAGAGAAGT TTGCACTATAAAAATATTACACCAAATCCTACCCTGCACATTCCTCAACCGCTTTTAGACTTTGAAGTGCTTAAAAATGC TTCGTTTTTTGGATTTAGCCTTGTAGCAGTGATTGCTGGATTTAGCTTTGTCGTATTACTCACTTATTTTCCTACTTTTC TCTCTATAAACTTTGGATTCTCTGCCTCTTTTTCTGGGCTTTTTATGCTCTCCCTCACTACGCCTATGCTATTTTGTCCA ATTCTTGCAGGAAAAATGCTAAACAAAGGGGTAGATTCTAAAGCTCTTGCCCTTGCAATGTCTTTGATGATGAGCTTAGG AATCTTTGCACTTTTAATCATCTTGCATACTCTAAGCGGTGTTACGCTTCAGCTAATGACGCTTTTAGTGCTTTTTGTTA TTGGCTGTGGTATGGGATTACACGCAGGGGCGATTGATGGATTGGCTCTTGGGAGTGTAGAATCTGCTAAAAGTGGCTTA GGCGCAGGAGTGCTTAATTCCTTGCGTTTAGGCTCTGAAGCGGTGGGAGTAAGCCTCTATGGCGCACTTATGGTGGTGTT TATTACCGCAAATCTCTCCTATCTTTTGGATAGTGAAGATTCTGTGTATCCCATTGTGGAAAGTATCGCAAGTGGAAATC TTAGTGCGGTTGAGAATCCGCTGATTTCAGCAAATGCACCCTCTATTTATCTGCAATCTTTTTCTTACACTTTGGGAATA TTGGGGCTTATAAGCCTTGCTTTAAGCTTAGGTGTTTGGAGATTGCTTGGGAGGGTAAAATAG
Upstream 100 bases:
>100_bases TTGTAATACTTGACATTATAACAAAACTGCTTTATACTTCCTCTATTACTAGTTGTAATATTATTTATTACATTAAAAAG GCTAAAATCAAGGAGACCCA
Downstream 100 bases:
>100_bases AGTGCTTAAACTGCATTAAGCACTTTGAAAAATCTCAATTACTCTTATTATCTTAAGCAAGATTTGCTGTTTTTCTCACT CTACATTTTACCAAATCCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 500; Mature: 500
Protein sequence:
>500_residues MNLILFTILLAVFVVPSSISGTAIALPYIAEDIGSDTTLLQWVVNSFNLFFACFTLIWGAISDRLGAKTCLIAGVATYLL GSILSFLAPSLLWLDVGRALAGIGGASVFACGSAILIRTFEDKERVKAFAFFGTTAGLGITLGPTLSGFLIDLFAWRAIF VFHFLTLGVVLLLSPMLPKDPQKQQKAFKFDKMGALLFIAFMSSFMLFITKIHAFKEPQTLGILAFCLIVGIVFGVHQRS LHYKNITPNPTLHIPQPLLDFEVLKNASFFGFSLVAVIAGFSFVVLLTYFPTFLSINFGFSASFSGLFMLSLTTPMLFCP ILAGKMLNKGVDSKALALAMSLMMSLGIFALLIILHTLSGVTLQLMTLLVLFVIGCGMGLHAGAIDGLALGSVESAKSGL GAGVLNSLRLGSEAVGVSLYGALMVVFITANLSYLLDSEDSVYPIVESIASGNLSAVENPLISANAPSIYLQSFSYTLGI LGLISLALSLGVWRLLGRVK
Sequences:
>Translated_500_residues MNLILFTILLAVFVVPSSISGTAIALPYIAEDIGSDTTLLQWVVNSFNLFFACFTLIWGAISDRLGAKTCLIAGVATYLL GSILSFLAPSLLWLDVGRALAGIGGASVFACGSAILIRTFEDKERVKAFAFFGTTAGLGITLGPTLSGFLIDLFAWRAIF VFHFLTLGVVLLLSPMLPKDPQKQQKAFKFDKMGALLFIAFMSSFMLFITKIHAFKEPQTLGILAFCLIVGIVFGVHQRS LHYKNITPNPTLHIPQPLLDFEVLKNASFFGFSLVAVIAGFSFVVLLTYFPTFLSINFGFSASFSGLFMLSLTTPMLFCP ILAGKMLNKGVDSKALALAMSLMMSLGIFALLIILHTLSGVTLQLMTLLVLFVIGCGMGLHAGAIDGLALGSVESAKSGL GAGVLNSLRLGSEAVGVSLYGALMVVFITANLSYLLDSEDSVYPIVESIASGNLSAVENPLISANAPSIYLQSFSYTLGI LGLISLALSLGVWRLLGRVK >Mature_500_residues MNLILFTILLAVFVVPSSISGTAIALPYIAEDIGSDTTLLQWVVNSFNLFFACFTLIWGAISDRLGAKTCLIAGVATYLL GSILSFLAPSLLWLDVGRALAGIGGASVFACGSAILIRTFEDKERVKAFAFFGTTAGLGITLGPTLSGFLIDLFAWRAIF VFHFLTLGVVLLLSPMLPKDPQKQQKAFKFDKMGALLFIAFMSSFMLFITKIHAFKEPQTLGILAFCLIVGIVFGVHQRS LHYKNITPNPTLHIPQPLLDFEVLKNASFFGFSLVAVIAGFSFVVLLTYFPTFLSINFGFSASFSGLFMLSLTTPMLFCP ILAGKMLNKGVDSKALALAMSLMMSLGIFALLIILHTLSGVTLQLMTLLVLFVIGCGMGLHAGAIDGLALGSVESAKSGL GAGVLNSLRLGSEAVGVSLYGALMVVFITANLSYLLDSEDSVYPIVESIASGNLSAVENPLISANAPSIYLQSFSYTLGI LGLISLALSLGVWRLLGRVK
Specific function: Confers export-mediated resistance against antiseptic and disinfectant compounds such as intercalating dyes, quaternary ammonium salts and diamidines [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
Organism=Escherichia coli, GI87081983, Length=409, Percent_Identity=23.2273838630807, Blast_Score=90, Evalue=4e-19, Organism=Escherichia coli, GI1790195, Length=407, Percent_Identity=26.5356265356265, Blast_Score=89, Evalue=6e-19, Organism=Escherichia coli, GI1790146, Length=177, Percent_Identity=26.5536723163842, Blast_Score=62, Evalue=7e-11, Organism=Saccharomyces cerevisiae, GI6323735, Length=324, Percent_Identity=26.8518518518519, Blast_Score=67, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 53359; Mature: 53359
Theoretical pI: Translated: 8.36; Mature: 8.36
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLILFTILLAVFVVPSSISGTAIALPYIAEDIGSDTTLLQWVVNSFNLFFACFTLIWGA CHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH ISDRLGAKTCLIAGVATYLLGSILSFLAPSLLWLDVGRALAGIGGASVFACGSAILIRTF HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCEEEEC EDKERVKAFAFFGTTAGLGITLGPTLSGFLIDLFAWRAIFVFHFLTLGVVLLLSPMLPKD CHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC PQKQQKAFKFDKMGALLFIAFMSSFMLFITKIHAFKEPQTLGILAFCLIVGIVFGVHQRS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC LHYKNITPNPTLHIPQPLLDFEVLKNASFFGFSLVAVIAGFSFVVLLTYFPTFLSINFGF CEECCCCCCCCEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCC SASFSGLFMLSLTTPMLFCPILAGKMLNKGVDSKALALAMSLMMSLGIFALLIILHTLSG CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC VTLQLMTLLVLFVIGCGMGLHAGAIDGLALGSVESAKSGLGAGVLNSLRLGSEAVGVSLY HHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCHHHHHCCCCHHHHHHHHCCCHHHHHHHH GALMVVFITANLSYLLDSEDSVYPIVESIASGNLSAVENPLISANAPSIYLQSFSYTLGI HHHHHHHHHHCHHHEECCCCCHHHHHHHHHCCCHHHHCCCCCCCCCCHHHHHHHHHHHHH LGLISLALSLGVWRLLGRVK HHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNLILFTILLAVFVVPSSISGTAIALPYIAEDIGSDTTLLQWVVNSFNLFFACFTLIWGA CHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH ISDRLGAKTCLIAGVATYLLGSILSFLAPSLLWLDVGRALAGIGGASVFACGSAILIRTF HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCEEEEC EDKERVKAFAFFGTTAGLGITLGPTLSGFLIDLFAWRAIFVFHFLTLGVVLLLSPMLPKD CHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC PQKQQKAFKFDKMGALLFIAFMSSFMLFITKIHAFKEPQTLGILAFCLIVGIVFGVHQRS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC LHYKNITPNPTLHIPQPLLDFEVLKNASFFGFSLVAVIAGFSFVVLLTYFPTFLSINFGF CEECCCCCCCCEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCC SASFSGLFMLSLTTPMLFCPILAGKMLNKGVDSKALALAMSLMMSLGIFALLIILHTLSG CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC VTLQLMTLLVLFVIGCGMGLHAGAIDGLALGSVESAKSGLGAGVLNSLRLGSEAVGVSLY HHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCHHHHHCCCCHHHHHHHHCCCHHHHHHHH GALMVVFITANLSYLLDSEDSVYPIVESIASGNLSAVENPLISANAPSIYLQSFSYTLGI HHHHHHHHHHCHHHEECCCCCHHHHHHHHHCCCHHHHCCCCCCCCCCHHHHHHHHHHHHH LGLISLALSLGVWRLLGRVK HHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11418146 [H]