| Definition | Helicobacter hepaticus ATCC 51449 chromosome, complete genome. |
|---|---|
| Accession | NC_004917 |
| Length | 1,799,146 |
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The map label for this gene is arsB [H]
Identifier: 32266923
GI number: 32266923
Start: 1367061
End: 1368368
Strand: Direct
Name: arsB [H]
Synonym: HH1424
Alternate gene names: 32266923
Gene position: 1367061-1368368 (Clockwise)
Preceding gene: 32266922
Following gene: 32266924
Centisome position: 75.98
GC content: 37.16
Gene sequence:
>1308_bases ATGGATTTTATGGCTTTTAGTCTTTTTATACTCACAATGCTTCTTATTTATTGGCGTCCTTTAAATCTTCCTTTGTGGGT GTTTAGCACTTTAGGAGCTGTAGGCGCTTATTTATTCAATGTAGTGAATTTGGACGATATTTGGCGTGTATGGGCAATGG TGTGGGATAGCACACTTACACTCATTGGACTTATCCTTCTTACTCTCGCGTTTGAAACATTAGGATTTTTTGATTTCCTT GCATTATTACTTATCCGAATCTTAAGTCAAAAGGGTGAGAAACAAAGCTTAAGTAGCGCAAGATTCTATATTTTTCTTGT GCTTTTTAGTGCTTTTTTAAGTGCGTTTTTTGCAAACGATGGTGCTATTTTAATCCTCACACCTTTAATCCTCACACTTT TTAAAGTGCATAATACAAAGGTATTTTTCACGCCTTTAATTGTATTTTTGTTTCTTGTAAGCTTTGTGAGTGATTTTGCT TCAAATACCTTTGTTATTTCTAATCTCACAAACATTATCACCGCGCATTTTTTTGAGATTCCCTCACTCCGCTTTAGCGT GCTTATGTTTTTGCCCCAAATTGTTGTGATTTGTGGGATTGTAGGATTTTGGTATATAGTGAGGAGAATCTTGCCTCCTA GACTTGAATTTAGGGATTTGCAAAGTGATATTTCTAAAGGTTGCATTATCTTTTGTTTTGCCCTGCTACTCCTTCTTGTG TTTGGTATTGCTTTTGCGCATAAATTAGGTATTCCACTCTCAAGTTTTACATTTCTATGTGCGATTTTGGCATTGCTTTA TGGCAAGATAAAAGGGCAGCTAGGGATATTCTCTTGTTTTAAAAACGCACCCTTTGGTATAGTATTATTTTCTCTTGGGC TATTTGTTGTCGTTTTTGGGCTTAAAAATGGCGGTGTGTTGCAGATTCTAAGTGATAATCTGTCGTTGTTTGTCTCGTTG CCAAAAGAATGGCAGATTGTAAGTATGGGGCTTGGAAGTGGTGTTGGCAGTAGTGTGATAAACAATCTGCCTATGGTAAT GCTTGGTAATCTCGCACTTGCAGATTTTAAAGCATATTTGAATGAGGCGCAGGAAAGTCTTATCATCGCACATTTGCTTG GTTGCAATATTGGCTCGAAACTCACACCCATAGGCTCACTTGCAACTTTACTTTGGCTTGAAAGGTTAAAAGGCTATGGA ATCCGCATTAGTTTTATGCGTTATATGGCAGTGGCGTTTGTAGTTACTCTACCTGTGCTATTTTTAGGATTGTTCGGGCT GATTTGGGGATATTATTTTTATGTTTGA
Upstream 100 bases:
>100_bases GCAGTTGAAGCTAAGTTAATCTTAACTCTTCTTAATACCCTCTATGTTAGAATCTCGCAAAAATTGCAAATCAAAGCAGG TATGAACGAGGTAGCCTTTT
Downstream 100 bases:
>100_bases AAAATAGGCTTTTATAAAAAGTTACTTAGATTCACTATAATAGAAGTAATCAAAACGATTGGGAAATAAGAGTGAAAAAG TCTAAAACAATAAAAATTAT
Product: hypothetical protein
Products: ADP; phosphate; arsenite [Periplasm] [C]
Alternate protein names: Arsenic efflux pump protein [H]
Number of amino acids: Translated: 435; Mature: 435
Protein sequence:
>435_residues MDFMAFSLFILTMLLIYWRPLNLPLWVFSTLGAVGAYLFNVVNLDDIWRVWAMVWDSTLTLIGLILLTLAFETLGFFDFL ALLLIRILSQKGEKQSLSSARFYIFLVLFSAFLSAFFANDGAILILTPLILTLFKVHNTKVFFTPLIVFLFLVSFVSDFA SNTFVISNLTNIITAHFFEIPSLRFSVLMFLPQIVVICGIVGFWYIVRRILPPRLEFRDLQSDISKGCIIFCFALLLLLV FGIAFAHKLGIPLSSFTFLCAILALLYGKIKGQLGIFSCFKNAPFGIVLFSLGLFVVVFGLKNGGVLQILSDNLSLFVSL PKEWQIVSMGLGSGVGSSVINNLPMVMLGNLALADFKAYLNEAQESLIIAHLLGCNIGSKLTPIGSLATLLWLERLKGYG IRISFMRYMAVAFVVTLPVLFLGLFGLIWGYYFYV
Sequences:
>Translated_435_residues MDFMAFSLFILTMLLIYWRPLNLPLWVFSTLGAVGAYLFNVVNLDDIWRVWAMVWDSTLTLIGLILLTLAFETLGFFDFL ALLLIRILSQKGEKQSLSSARFYIFLVLFSAFLSAFFANDGAILILTPLILTLFKVHNTKVFFTPLIVFLFLVSFVSDFA SNTFVISNLTNIITAHFFEIPSLRFSVLMFLPQIVVICGIVGFWYIVRRILPPRLEFRDLQSDISKGCIIFCFALLLLLV FGIAFAHKLGIPLSSFTFLCAILALLYGKIKGQLGIFSCFKNAPFGIVLFSLGLFVVVFGLKNGGVLQILSDNLSLFVSL PKEWQIVSMGLGSGVGSSVINNLPMVMLGNLALADFKAYLNEAQESLIIAHLLGCNIGSKLTPIGSLATLLWLERLKGYG IRISFMRYMAVAFVVTLPVLFLGLFGLIWGYYFYV >Mature_435_residues MDFMAFSLFILTMLLIYWRPLNLPLWVFSTLGAVGAYLFNVVNLDDIWRVWAMVWDSTLTLIGLILLTLAFETLGFFDFL ALLLIRILSQKGEKQSLSSARFYIFLVLFSAFLSAFFANDGAILILTPLILTLFKVHNTKVFFTPLIVFLFLVSFVSDFA SNTFVISNLTNIITAHFFEIPSLRFSVLMFLPQIVVICGIVGFWYIVRRILPPRLEFRDLQSDISKGCIIFCFALLLLLV FGIAFAHKLGIPLSSFTFLCAILALLYGKIKGQLGIFSCFKNAPFGIVLFSLGLFVVVFGLKNGGVLQILSDNLSLFVSL PKEWQIVSMGLGSGVGSSVINNLPMVMLGNLALADFKAYLNEAQESLIIAHLLGCNIGSKLTPIGSLATLLWLERLKGYG IRISFMRYMAVAFVVTLPVLFLGLFGLIWGYYFYV
Specific function: Involved in arsenical resistance. Thought to form the channel of an arsenite pump [H]
COG id: COG1055
COG function: function code P; Na+/H+ antiporter NhaD and related arsenite permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ArsB family [H]
Homologues:
Organism=Escherichia coli, GI87082277, Length=429, Percent_Identity=32.6340326340326, Blast_Score=196, Evalue=4e-51,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000802 [H]
Pfam domain/function: PF02040 ArsB [H]
EC number: NA
Molecular weight: Translated: 48637; Mature: 48637
Theoretical pI: Translated: 9.13; Mature: 9.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDFMAFSLFILTMLLIYWRPLNLPLWVFSTLGAVGAYLFNVVNLDDIWRVWAMVWDSTLT CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH LIGLILLTLAFETLGFFDFLALLLIRILSQKGEKQSLSSARFYIFLVLFSAFLSAFFAND HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC GAILILTPLILTLFKVHNTKVFFTPLIVFLFLVSFVSDFASNTFVISNLTNIITAHFFEI CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHC PSLRFSVLMFLPQIVVICGIVGFWYIVRRILPPRLEFRDLQSDISKGCIIFCFALLLLLV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHH FGIAFAHKLGIPLSSFTFLCAILALLYGKIKGQLGIFSCFKNAPFGIVLFSLGLFVVVFG HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHH LKNGGVLQILSDNLSLFVSLPKEWQIVSMGLGSGVGSSVINNLPMVMLGNLALADFKAYL CCCCCEEEEECCCCEEEEECCCCCEEEEECCCCCCHHHHHHCCCHHHHHHHHHHHHHHHH NEAQESLIIAHLLGCNIGSKLTPIGSLATLLWLERLKGYGIRISFMRYMAVAFVVTLPVL HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH FLGLFGLIWGYYFYV HHHHHHHHHHHHHCC >Mature Secondary Structure MDFMAFSLFILTMLLIYWRPLNLPLWVFSTLGAVGAYLFNVVNLDDIWRVWAMVWDSTLT CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH LIGLILLTLAFETLGFFDFLALLLIRILSQKGEKQSLSSARFYIFLVLFSAFLSAFFAND HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC GAILILTPLILTLFKVHNTKVFFTPLIVFLFLVSFVSDFASNTFVISNLTNIITAHFFEI CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHC PSLRFSVLMFLPQIVVICGIVGFWYIVRRILPPRLEFRDLQSDISKGCIIFCFALLLLLV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHH FGIAFAHKLGIPLSSFTFLCAILALLYGKIKGQLGIFSCFKNAPFGIVLFSLGLFVVVFG HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHH LKNGGVLQILSDNLSLFVSLPKEWQIVSMGLGSGVGSSVINNLPMVMLGNLALADFKAYL CCCCCEEEEECCCCEEEEECCCCCEEEEECCCCCCHHHHHHCCCHHHHHHHHHHHHHHHH NEAQESLIIAHLLGCNIGSKLTPIGSLATLLWLERLKGYGIRISFMRYMAVAFVVTLPVL HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH FLGLFGLIWGYYFYV HHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; arsenite [Cytoplasm]; H2O [C]
Specific reaction: ATP + arsenite [Cytoplasm] + H2O = ADP + phosphate + arsenite [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12950922 [H]