| Definition | Helicobacter hepaticus ATCC 51449 chromosome, complete genome. |
|---|---|
| Accession | NC_004917 |
| Length | 1,799,146 |
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The map label for this gene is 32266924
Identifier: 32266924
GI number: 32266924
Start: 1368440
End: 1370017
Strand: Direct
Name: 32266924
Synonym: HH1425
Alternate gene names: NA
Gene position: 1368440-1370017 (Clockwise)
Preceding gene: 32266923
Following gene: 32266925
Centisome position: 76.06
GC content: 32.19
Gene sequence:
>1578_bases GTGAAAAAGTCTAAAACAATAAAAATTATTAAAAGGGTAGGATTACGATACGCCCTTGCTTATCGAATTAGAAAGAAAAA GAAGAGAATAGCAAAAAAGATAAAAGTAACTCATTGGTATAAAATTTTAAAGATGTTTATTCTTGTAAATAAAGCAAAAT GTAACTTAAGTTTTTTTTTCTTAAGAAAATATAATATTTTAATTGAATGTAAAGCAAGTTTGGATTTGATTGCCAAAGAG TATGATAATATCAAACTATGGCTTACCTCTCAATCATTCTTAGAAAAATATGCTAATCACCCATATCCTCCATTGCTTAA TCCCAAAAAATTAGATTACACAAAGATTCCTGCCGAAGTTGCGTGGGATCTTAATTTGCCTTTACCACCTTATTATCAGT TCGTGTTTTTTGGTAGCCACGCAACTGGTAATAGAGGATTGGAAAGTTTTTTGAGGAGATGTGGGGGATTGAATTATTGT GTGCAACCACCTTTGCTCAATGGCGAATCTTGGGCGAAAGAATCTTATTTTTGTTATTTTAAACAAATTATGAGAAATTA CCATTATACTATGCCCCCCCCCCCGTTATATTTTGGCTATTTGTCTGTTCGAGAATATATGTTTAATGATAAATATAAAG ATAAGCTTTATGCCCTTATCCCCAAAACTAATGCACTTTGTCTCGTTCGAGACCCTATAGGTATGCTTAAGAGCTATACC TCATATCATGGTCGTCCTAGTTTTACGCAAGTATTTGAACTTGCCCTTAGTCCTAGTGAGATTTTTGAGGAGCTTATACG ATATATAGATTGGCATTTTGATGGAAAACATCTTATTTGGGAATACACCAAATATCCTACACTACGAACAAGTGCATTTC GGCTAAATCAATATGATGCGACTTTCCACGACACAGACTTAAGAAAAGCCCTTATTAATATTGCAGATGAAGATATTATA TGTATTGATATGTCTGAAATTGTAGGTAAGAGAGCCTTTGAAACAATGAATACTCTAGCAAAAGCATTTTCTTTTCCTGC CCCAAAACCTAGTGATAAGGAGAAATTTGGAATAAAGGCTGGTTTATATGAGGGAGTGTTGCCCATAAAGTTTGCTTATA AGAATATACATATTTACCTTTTGGACAATGTTTATTGTTCAGATTGCAGATTTTATATAGAATTAGGTCAGTTTGTTGAG CATAAAAATGCTTTTGAGCATTATCAAGACATCACACAATTTCTTTTTAATCAAGATAATTTTTATGAGCGTATTATTGT ATGTATTGAGAAAAAAGACTTTGAGATTCTAAAAGAAAATAAAAAAGTTTGTGATGAAATAAAAGCATATTTACTTACAT TTATTCCACGCCTAGAGGAGCAAAGGAAAATTGAAGAGACAAAGAGATTTACCGAAAAAGACATTTTAGAATATCTCAAA TCTCACAAAGATTTATGTCTTGAAGCTAAAGCAGTCTTTGAAAAACATCTCACATTTCTAGCTTCTGTGCGTCCAGATAT TATAGAATCTTGGAAGTATTATCAGGAGTTTTTAGCAATGTGCGAGGAAATATCTTAG
Upstream 100 bases:
>100_bases TGATTTGGGGATATTATTTTTATGTTTGAAAAATAGGCTTTTATAAAAAGTTACTTAGATTCACTATAATAGAAGTAATC AAAACGATTGGGAAATAAGA
Downstream 100 bases:
>100_bases GTAAATAAAGTTATCAATATTTTGTTATACTTTCATTTTAATCGTTAATGAGAAATAAATATTTCAAGGAGACTTAAATA ATGAAACAAGGTGATTTTAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 525; Mature: 525
Protein sequence:
>525_residues MKKSKTIKIIKRVGLRYALAYRIRKKKKRIAKKIKVTHWYKILKMFILVNKAKCNLSFFFLRKYNILIECKASLDLIAKE YDNIKLWLTSQSFLEKYANHPYPPLLNPKKLDYTKIPAEVAWDLNLPLPPYYQFVFFGSHATGNRGLESFLRRCGGLNYC VQPPLLNGESWAKESYFCYFKQIMRNYHYTMPPPPLYFGYLSVREYMFNDKYKDKLYALIPKTNALCLVRDPIGMLKSYT SYHGRPSFTQVFELALSPSEIFEELIRYIDWHFDGKHLIWEYTKYPTLRTSAFRLNQYDATFHDTDLRKALINIADEDII CIDMSEIVGKRAFETMNTLAKAFSFPAPKPSDKEKFGIKAGLYEGVLPIKFAYKNIHIYLLDNVYCSDCRFYIELGQFVE HKNAFEHYQDITQFLFNQDNFYERIIVCIEKKDFEILKENKKVCDEIKAYLLTFIPRLEEQRKIEETKRFTEKDILEYLK SHKDLCLEAKAVFEKHLTFLASVRPDIIESWKYYQEFLAMCEEIS
Sequences:
>Translated_525_residues MKKSKTIKIIKRVGLRYALAYRIRKKKKRIAKKIKVTHWYKILKMFILVNKAKCNLSFFFLRKYNILIECKASLDLIAKE YDNIKLWLTSQSFLEKYANHPYPPLLNPKKLDYTKIPAEVAWDLNLPLPPYYQFVFFGSHATGNRGLESFLRRCGGLNYC VQPPLLNGESWAKESYFCYFKQIMRNYHYTMPPPPLYFGYLSVREYMFNDKYKDKLYALIPKTNALCLVRDPIGMLKSYT SYHGRPSFTQVFELALSPSEIFEELIRYIDWHFDGKHLIWEYTKYPTLRTSAFRLNQYDATFHDTDLRKALINIADEDII CIDMSEIVGKRAFETMNTLAKAFSFPAPKPSDKEKFGIKAGLYEGVLPIKFAYKNIHIYLLDNVYCSDCRFYIELGQFVE HKNAFEHYQDITQFLFNQDNFYERIIVCIEKKDFEILKENKKVCDEIKAYLLTFIPRLEEQRKIEETKRFTEKDILEYLK SHKDLCLEAKAVFEKHLTFLASVRPDIIESWKYYQEFLAMCEEIS >Mature_525_residues MKKSKTIKIIKRVGLRYALAYRIRKKKKRIAKKIKVTHWYKILKMFILVNKAKCNLSFFFLRKYNILIECKASLDLIAKE YDNIKLWLTSQSFLEKYANHPYPPLLNPKKLDYTKIPAEVAWDLNLPLPPYYQFVFFGSHATGNRGLESFLRRCGGLNYC VQPPLLNGESWAKESYFCYFKQIMRNYHYTMPPPPLYFGYLSVREYMFNDKYKDKLYALIPKTNALCLVRDPIGMLKSYT SYHGRPSFTQVFELALSPSEIFEELIRYIDWHFDGKHLIWEYTKYPTLRTSAFRLNQYDATFHDTDLRKALINIADEDII CIDMSEIVGKRAFETMNTLAKAFSFPAPKPSDKEKFGIKAGLYEGVLPIKFAYKNIHIYLLDNVYCSDCRFYIELGQFVE HKNAFEHYQDITQFLFNQDNFYERIIVCIEKKDFEILKENKKVCDEIKAYLLTFIPRLEEQRKIEETKRFTEKDILEYLK SHKDLCLEAKAVFEKHLTFLASVRPDIIESWKYYQEFLAMCEEIS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62422; Mature: 62422
Theoretical pI: Translated: 9.25; Mature: 9.25
Prosite motif: PS00599 AA_TRANSFER_CLASS_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKSKTIKIIKRVGLRYALAYRIRKKKKRIAKKIKVTHWYKILKMFILVNKAKCNLSFFF CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE LRKYNILIECKASLDLIAKEYDNIKLWLTSQSFLEKYANHPYPPLLNPKKLDYTKIPAEV EEECCEEEEECCHHHHHHHHCCCEEEEEECHHHHHHHCCCCCCCCCCCCCCCCEECCHHH AWDLNLPLPPYYQFVFFGSHATGNRGLESFLRRCGGLNYCVQPPLLNGESWAKESYFCYF EEECCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCEECCCCCCCCCCHHHHHHHHHH KQIMRNYHYTMPPPPLYFGYLSVREYMFNDKYKDKLYALIPKTNALCLVRDPIGMLKSYT HHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCHHCCEEEEECCCCCEEEEECCHHHHHHHH SYHGRPSFTQVFELALSPSEIFEELIRYIDWHFDGKHLIWEYTKYPTLRTSAFRLNQYDA HCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEHHHEEECCCCC TFHDTDLRKALINIADEDIICIDMSEIVGKRAFETMNTLAKAFSFPAPKPSDKEKFGIKA CCCHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCHH GLYEGVLPIKFAYKNIHIYLLDNVYCSDCRFYIELGQFVEHKNAFEHYQDITQFLFNQDN HHHCCCCEEEEEEEEEEEEEECCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC FYERIIVCIEKKDFEILKENKKVCDEIKAYLLTFIPRLEEQRKIEETKRFTEKDILEYLK HHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SHKDLCLEAKAVFEKHLTFLASVRPDIIESWKYYQEFLAMCEEIS CCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKKSKTIKIIKRVGLRYALAYRIRKKKKRIAKKIKVTHWYKILKMFILVNKAKCNLSFFF CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE LRKYNILIECKASLDLIAKEYDNIKLWLTSQSFLEKYANHPYPPLLNPKKLDYTKIPAEV EEECCEEEEECCHHHHHHHHCCCEEEEEECHHHHHHHCCCCCCCCCCCCCCCCEECCHHH AWDLNLPLPPYYQFVFFGSHATGNRGLESFLRRCGGLNYCVQPPLLNGESWAKESYFCYF EEECCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCEECCCCCCCCCCHHHHHHHHHH KQIMRNYHYTMPPPPLYFGYLSVREYMFNDKYKDKLYALIPKTNALCLVRDPIGMLKSYT HHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCHHCCEEEEECCCCCEEEEECCHHHHHHHH SYHGRPSFTQVFELALSPSEIFEELIRYIDWHFDGKHLIWEYTKYPTLRTSAFRLNQYDA HCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEHHHEEECCCCC TFHDTDLRKALINIADEDIICIDMSEIVGKRAFETMNTLAKAFSFPAPKPSDKEKFGIKA CCCHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCHH GLYEGVLPIKFAYKNIHIYLLDNVYCSDCRFYIELGQFVEHKNAFEHYQDITQFLFNQDN HHHCCCCEEEEEEEEEEEEEECCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC FYERIIVCIEKKDFEILKENKKVCDEIKAYLLTFIPRLEEQRKIEETKRFTEKDILEYLK HHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SHKDLCLEAKAVFEKHLTFLASVRPDIIESWKYYQEFLAMCEEIS CCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA