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The map label for this gene is yfjK [H]

Identifier: 32266919

GI number: 32266919

Start: 1360957

End: 1363026

Strand: Direct

Name: yfjK [H]

Synonym: HH1420

Alternate gene names: 32266919

Gene position: 1360957-1363026 (Clockwise)

Preceding gene: 32266918

Following gene: 32266920

Centisome position: 75.64

GC content: 27.1

Gene sequence:

>2070_bases
ATGACTAACGAACAAATTTTTGATGAATGCAAAAGAATCTACACGCTTGATGACAAAGAAAAAGCTAATGAGCTTTTTAG
ATTGCTTGATAAAATAGGTAATAAACGAAATTATTCCCCTGTATTAAACCACTTAATTAGAGAGGTTGGAATATATCCTT
ATATCAATCAAGATACAGCCATATTTTCAGATAGGCTCGTGTGTGAATGTTTCAAGACTGATGTAGGAGAGAATGAACCA
AAGATATTGCATAGAGAGCAATCAAGGATTTTAAAACGATTATTGGAGGGAGAAAATCTAATCCTTTCAGCTCCTACAAG
TTTTGGAAAAAGCTTTATTATTGATGCACTCATCGCCATTAAAAAACCAAGCAATATCTTAATTATCGTTCCAACTATTT
CGCTTATGGACGAGACAAGAAGAAGATTAACGCTAAAATTTGGTAGTGACTATCATATTATTACAACTAGCGGTTCTCAA
CTAAAAGATAAAAATATATTTATTTTCCCGCAGGAAAGGGCTTTAGAATACTTTGAGAATCTTAGAGAAAAAAGCTTGGA
TTTATTTATAGTAGATGAGTTTTATAAAATGTCTAATAAAGACAGAAGAACACATATACTTCACAATATTGTTAATAAGT
TTAAAAATATTGCCAAACAAAAATATTATATATGCCCTAATGCAGACGACATAGAAGATAAGTCTAAAAATAAAATTTTT
CTAGCAGGTTTAAAGAAAGAAATTTTGACAATCACAACAGTGGCTCTCAATAAATTTGACTTAAGCAAAGAAACAGGGAG
CAAGGAATTAAAAATTCAAAATCTTTTAAAAAATGAAATTGGCAAAAGTTTGATTTATGTTAGCACAAAACCTAATTCTA
AAAAATTATGTAAAATTTTATTAAAATTTATTAAAGCAGGCAATGAGGAACTTAATTCGTTTTCTCAATGGCTGCAAAAA
CACTATGCCAGAGAATGGGATTTTGCAACAAATATAAAAAATGGTATAGGGCAACATAATTCCGCAATTCATAGATATAT
ACAACAATTACAAGTTAAATTATTTTCTGAAAACCCTAGTATGAATATTATGGTAAGCACTACTTCTTTAATTGAAGGGG
TAAATACTGCAGCAAGAAATATTATTATATGGAATAATCAAGTTGCTAATGATTCTTTGAACAGCTTTACTTATAAAAAT
ATAATTGGTAGAGGCGGAAGAATGTTTAAGTATTTTGTAGGAAATATTTATTTGTTGGATAATGAAAATAAAATAGAAGA
AAAAGAAGTTGAAAAAATTGATATTAATCCTGATGAAGAGTTTTTATATAGAAATGATTTAGAAAATCCTGATTTAGAAA
GTAAAAAATTAATTGAACAGAAGCTATTCAGTCTCATAAAAGATAAACAAAAATTTCAAAAATTAATAAGCTATATAAAA
AATTACAAAATAATAATGAATATTGAAAATGTCCTGCAAATCATAGAAAGTGTCAATGAAATTATGAAGAGCATTAAACA
TCTTAACAATGATAATCCAGATTCTTGGGGATTGTTAGAGGTAAAATCTGTTAGAAATATTTTTTCTAACAATGATAAGA
AGCTAGATAGAGCATATAAAAATATTAAAGTATTTGCAAAATATAATTGGAATGGCACTTCTGCATTATTGAACAATAGC
ACTATTAACATAAATGATTATTTTAATATTGAAAAAATCATTGTTTTTGATATAGCTAGTTTTTTTAACGATATTAATGA
AATACAGCAAATTCTTTATCCTGATAAGCACATTAATATTTCTCCCTTTGTAAGCAAACTTTCTAACGCATTTCTTCCCT
CTGTTGTCTATACCTTAGAAGAATTTGGCTTGCCAAGAATGTTATCAAAGAAATTGCACAAATATAACTTTATCAACTTT
GAAAATAATGATTTAAAGATTGATGAAGCTTTAGAAACATTTAAAGAATCAAGCGTTGAAGAAATAATAAACTTATTCAA
ATCTCACAATGATTTTGATGATTTTGATGAGTATATATTAAAATATTTTTATGATGGATTGGGAAAATAA

Upstream 100 bases:

>100_bases
TGATTGAATATATTAAATTTCATATTATAATTTTTCCAATTCCCAATAAAAAAGAATTAGTAGCACAAATCAATAAAATT
TTTGAGGCACATAGACAATG

Downstream 100 bases:

>100_bases
TGATAAACAATATTCCAAAAAATTGGGAAATTAAAACCTTAGCAGAAGTTTGCACTTCTAAAAATTCAAATATTGTTTTA
AGCAGTATTGAAAATAATAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 689; Mature: 688

Protein sequence:

>689_residues
MTNEQIFDECKRIYTLDDKEKANELFRLLDKIGNKRNYSPVLNHLIREVGIYPYINQDTAIFSDRLVCECFKTDVGENEP
KILHREQSRILKRLLEGENLILSAPTSFGKSFIIDALIAIKKPSNILIIVPTISLMDETRRRLTLKFGSDYHIITTSGSQ
LKDKNIFIFPQERALEYFENLREKSLDLFIVDEFYKMSNKDRRTHILHNIVNKFKNIAKQKYYICPNADDIEDKSKNKIF
LAGLKKEILTITTVALNKFDLSKETGSKELKIQNLLKNEIGKSLIYVSTKPNSKKLCKILLKFIKAGNEELNSFSQWLQK
HYAREWDFATNIKNGIGQHNSAIHRYIQQLQVKLFSENPSMNIMVSTTSLIEGVNTAARNIIIWNNQVANDSLNSFTYKN
IIGRGGRMFKYFVGNIYLLDNENKIEEKEVEKIDINPDEEFLYRNDLENPDLESKKLIEQKLFSLIKDKQKFQKLISYIK
NYKIIMNIENVLQIIESVNEIMKSIKHLNNDNPDSWGLLEVKSVRNIFSNNDKKLDRAYKNIKVFAKYNWNGTSALLNNS
TININDYFNIEKIIVFDIASFFNDINEIQQILYPDKHINISPFVSKLSNAFLPSVVYTLEEFGLPRMLSKKLHKYNFINF
ENNDLKIDEALETFKESSVEEIINLFKSHNDFDDFDEYILKYFYDGLGK

Sequences:

>Translated_689_residues
MTNEQIFDECKRIYTLDDKEKANELFRLLDKIGNKRNYSPVLNHLIREVGIYPYINQDTAIFSDRLVCECFKTDVGENEP
KILHREQSRILKRLLEGENLILSAPTSFGKSFIIDALIAIKKPSNILIIVPTISLMDETRRRLTLKFGSDYHIITTSGSQ
LKDKNIFIFPQERALEYFENLREKSLDLFIVDEFYKMSNKDRRTHILHNIVNKFKNIAKQKYYICPNADDIEDKSKNKIF
LAGLKKEILTITTVALNKFDLSKETGSKELKIQNLLKNEIGKSLIYVSTKPNSKKLCKILLKFIKAGNEELNSFSQWLQK
HYAREWDFATNIKNGIGQHNSAIHRYIQQLQVKLFSENPSMNIMVSTTSLIEGVNTAARNIIIWNNQVANDSLNSFTYKN
IIGRGGRMFKYFVGNIYLLDNENKIEEKEVEKIDINPDEEFLYRNDLENPDLESKKLIEQKLFSLIKDKQKFQKLISYIK
NYKIIMNIENVLQIIESVNEIMKSIKHLNNDNPDSWGLLEVKSVRNIFSNNDKKLDRAYKNIKVFAKYNWNGTSALLNNS
TININDYFNIEKIIVFDIASFFNDINEIQQILYPDKHINISPFVSKLSNAFLPSVVYTLEEFGLPRMLSKKLHKYNFINF
ENNDLKIDEALETFKESSVEEIINLFKSHNDFDDFDEYILKYFYDGLGK
>Mature_688_residues
TNEQIFDECKRIYTLDDKEKANELFRLLDKIGNKRNYSPVLNHLIREVGIYPYINQDTAIFSDRLVCECFKTDVGENEPK
ILHREQSRILKRLLEGENLILSAPTSFGKSFIIDALIAIKKPSNILIIVPTISLMDETRRRLTLKFGSDYHIITTSGSQL
KDKNIFIFPQERALEYFENLREKSLDLFIVDEFYKMSNKDRRTHILHNIVNKFKNIAKQKYYICPNADDIEDKSKNKIFL
AGLKKEILTITTVALNKFDLSKETGSKELKIQNLLKNEIGKSLIYVSTKPNSKKLCKILLKFIKAGNEELNSFSQWLQKH
YAREWDFATNIKNGIGQHNSAIHRYIQQLQVKLFSENPSMNIMVSTTSLIEGVNTAARNIIIWNNQVANDSLNSFTYKNI
IGRGGRMFKYFVGNIYLLDNENKIEEKEVEKIDINPDEEFLYRNDLENPDLESKKLIEQKLFSLIKDKQKFQKLISYIKN
YKIIMNIENVLQIIESVNEIMKSIKHLNNDNPDSWGLLEVKSVRNIFSNNDKKLDRAYKNIKVFAKYNWNGTSALLNNST
ININDYFNIEKIIVFDIASFFNDINEIQQILYPDKHINISPFVSKLSNAFLPSVVYTLEEFGLPRMLSKKLHKYNFINFE
NNDLKIDEALETFKESSVEEIINLFKSHNDFDDFDEYILKYFYDGLGK

Specific function: Unknown

COG id: COG1204

COG function: function code R; Superfamily II helicase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI1788980, Length=416, Percent_Identity=30.5288461538462, Blast_Score=198, Evalue=1e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR001650
- InterPro:   IPR014021 [H]

Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]

EC number: NA

Molecular weight: Translated: 80504; Mature: 80373

Theoretical pI: Translated: 8.68; Mature: 8.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNEQIFDECKRIYTLDDKEKANELFRLLDKIGNKRNYSPVLNHLIREVGIYPYINQDTA
CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEECCCCH
IFSDRLVCECFKTDVGENEPKILHREQSRILKRLLEGENLILSAPTSFGKSFIIDALIAI
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHH
KKPSNILIIVPTISLMDETRRRLTLKFGSDYHIITTSGSQLKDKNIFIFPQERALEYFEN
CCCCCEEEEECCHHHHHHHHHEEEEEECCCEEEEECCCCCCCCCCEEEECHHHHHHHHHH
LREKSLDLFIVDEFYKMSNKDRRTHILHNIVNKFKNIAKQKYYICPNADDIEDKSKNKIF
HHHCCCCEEEEHHHHHCCCCCHHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCCCCEEE
LAGLKKEILTITTVALNKFDLSKETGSKELKIQNLLKNEIGKSLIYVSTKPNSKKLCKIL
EEEHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHH
LKFIKAGNEELNSFSQWLQKHYAREWDFATNIKNGIGQHNSAIHRYIQQLQVKLFSENPS
HHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCC
MNIMVSTTSLIEGVNTAARNIIIWNNQVANDSLNSFTYKNIIGRGGRMFKYFVGNIYLLD
CEEEEEHHHHHHHHHHHHCEEEEECCCCCCCCHHHHHHHHHHCCCCCEEEEEECEEEEEC
NENKIEEKEVEKIDINPDEEFLYRNDLENPDLESKKLIEQKLFSLIKDKQKFQKLISYIK
CCCCCCHHHHHEECCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NYKIIMNIENVLQIIESVNEIMKSIKHLNNDNPDSWGLLEVKSVRNIFSNNDKKLDRAYK
CCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHCCCHHHHHHHHH
NIKVFAKYNWNGTSALLNNSTININDYFNIEKIIVFDIASFFNDINEIQQILYPDKHINI
CEEEEEEECCCCCHHEECCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
SPFVSKLSNAFLPSVVYTLEEFGLPRMLSKKLHKYNFINFENNDLKIDEALETFKESSVE
CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEECCCCEEHHHHHHHHHHCCHH
EIINLFKSHNDFDDFDEYILKYFYDGLGK
HHHHHHHCCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TNEQIFDECKRIYTLDDKEKANELFRLLDKIGNKRNYSPVLNHLIREVGIYPYINQDTA
CCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEECCCCH
IFSDRLVCECFKTDVGENEPKILHREQSRILKRLLEGENLILSAPTSFGKSFIIDALIAI
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHH
KKPSNILIIVPTISLMDETRRRLTLKFGSDYHIITTSGSQLKDKNIFIFPQERALEYFEN
CCCCCEEEEECCHHHHHHHHHEEEEEECCCEEEEECCCCCCCCCCEEEECHHHHHHHHHH
LREKSLDLFIVDEFYKMSNKDRRTHILHNIVNKFKNIAKQKYYICPNADDIEDKSKNKIF
HHHCCCCEEEEHHHHHCCCCCHHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCCCCEEE
LAGLKKEILTITTVALNKFDLSKETGSKELKIQNLLKNEIGKSLIYVSTKPNSKKLCKIL
EEEHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHH
LKFIKAGNEELNSFSQWLQKHYAREWDFATNIKNGIGQHNSAIHRYIQQLQVKLFSENPS
HHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCC
MNIMVSTTSLIEGVNTAARNIIIWNNQVANDSLNSFTYKNIIGRGGRMFKYFVGNIYLLD
CEEEEEHHHHHHHHHHHHCEEEEECCCCCCCCHHHHHHHHHHCCCCCEEEEEECEEEEEC
NENKIEEKEVEKIDINPDEEFLYRNDLENPDLESKKLIEQKLFSLIKDKQKFQKLISYIK
CCCCCCHHHHHEECCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NYKIIMNIENVLQIIESVNEIMKSIKHLNNDNPDSWGLLEVKSVRNIFSNNDKKLDRAYK
CCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHCCCHHHHHHHHH
NIKVFAKYNWNGTSALLNNSTININDYFNIEKIIVFDIASFFNDINEIQQILYPDKHINI
CEEEEEEECCCCCHHEECCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
SPFVSKLSNAFLPSVVYTLEEFGLPRMLSKKLHKYNFINFENNDLKIDEALETFKESSVE
CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEECCCCEEHHHHHHHHHHCCHH
EIINLFKSHNDFDDFDEYILKYFYDGLGK
HHHHHHHCCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]