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The map label for this gene is hsdS [C]

Identifier: 32266920

GI number: 32266920

Start: 1363026

End: 1364294

Strand: Direct

Name: hsdS [C]

Synonym: HH1421

Alternate gene names: 32266920

Gene position: 1363026-1364294 (Clockwise)

Preceding gene: 32266919

Following gene: 32266921

Centisome position: 75.76

GC content: 36.33

Gene sequence:

>1269_bases
ATGATAAACAATATTCCAAAAAATTGGGAAATTAAAACCTTAGCAGAAGTTTGCACTTCTAAAAATTCAAATATTGTTTT
AAGCAGTATTGAAAATAATACAGGGAAATATCCAATCTATGGGGCGAAAGGATTTTTAAAAACTATTGATTTCTACACCA
TAGAAAATGAAAGTTTGGGTATCGTCAAAGATGGCGCGGGAGTAGGTAGAATCTTTCTATTGCCTGAAAAATCATCTTTA
ATAGGGACAATGGCTTACATACAAGCAAATGAAAATTTGAATTTAAAATATTTATATCATTTTTTGCATACAATCAATTT
TAACCAATACATAAGTGGTTCAGCGATTCCACATATTTATTTTAGGGATTATAAAAAAGAAAAAATCCCCCTCCCACCCC
TTGAGGTTCAAAAAGCCATAGTGGAAAAGCTAGAAAATGCCTTTGCGCATATTGATGAGGCAGTGCGTCATCTTAAGTCG
GTTCAAACAAACATTCCGCGCCTTAAATCCTCCTTGCTCCACTGCGCCTTTAGCGGCAAACTTACAGAATCTCAAAATTC
ATCGCACAAAGTGCAAACCTTAAAAAGCGTTGTCGGGGTGGAGGGAGAGTTTGAGAGGGAGGAGGGAGCGACTTCGCCAT
TCAAGCCCCTCCACCCTCTCATAAAGGAAGAAATTCCGCAAGGTTGGGAAATTAAAACACTTGGGGAAGTATTTAAGGTC
ATAGGTGGTGGAACGCCCTCTACTGCAAACCCTAAGTTTTGGAGCGGTAATATTGCTTGGATTACAAGCGCAAATATAGA
GAATGAAAATTTTACAATTATCCCTAAAAAATTTATAAATCAAAGTGCTATTCAAGCCTCTGCTACAAATCTTGTGCCAA
AAAATACTATTATTGTTGTAACAAGAGTTGGACTCGGTAAGGTAGGCATCACAGATGTAGAAACTTGTTTTAGTCAAGAT
AGTCAAGCCTTATTGCCTTTAATAGATTTAAATGTGAAATTTATGGCATTTCAAATAAGAAATAAGGCACAAAATTTTAT
TGTTAGCAGCAGAGGGACAACTATTAATGGTATTACAAAAGATACTCTTAAAAAGGTAGCATTAAAGATTCCGCCCCTTG
CAACCCAAAATCAAATCGTGCAGATTTTAGAATCCAAGTTTGCGCATTTGGAGAAGTTGGAGCAGTTTGTGAATGCAAGC
CTAGAAAATCTCCAAAAACTCAAATCCTCACTTTTAAACCAAGCGTTTAAGGGTGAGCTGATATGTTAA

Upstream 100 bases:

>100_bases
CAAGCGTTGAAGAAATAATAAACTTATTCAAATCTCACAATGATTTTGATGATTTTGATGAGTATATATTAAAATATTTT
TATGATGGATTGGGAAAATA

Downstream 100 bases:

>100_bases
GATTCCACTTGATTTTTAACATATTTTGTTATAATGTTAAAAAATTTTATATTTTTTAACATATCAAGGCAAGGCGAATG
AAAGAATTTATCCCAAATGA

Product: hypothetical protein

Products: NA

Alternate protein names: S.MjaXIP; Type I restriction enzyme MjaXIP specificity protein; S protein [H]

Number of amino acids: Translated: 422; Mature: 422

Protein sequence:

>422_residues
MINNIPKNWEIKTLAEVCTSKNSNIVLSSIENNTGKYPIYGAKGFLKTIDFYTIENESLGIVKDGAGVGRIFLLPEKSSL
IGTMAYIQANENLNLKYLYHFLHTINFNQYISGSAIPHIYFRDYKKEKIPLPPLEVQKAIVEKLENAFAHIDEAVRHLKS
VQTNIPRLKSSLLHCAFSGKLTESQNSSHKVQTLKSVVGVEGEFEREEGATSPFKPLHPLIKEEIPQGWEIKTLGEVFKV
IGGGTPSTANPKFWSGNIAWITSANIENENFTIIPKKFINQSAIQASATNLVPKNTIIVVTRVGLGKVGITDVETCFSQD
SQALLPLIDLNVKFMAFQIRNKAQNFIVSSRGTTINGITKDTLKKVALKIPPLATQNQIVQILESKFAHLEKLEQFVNAS
LENLQKLKSSLLNQAFKGELIC

Sequences:

>Translated_422_residues
MINNIPKNWEIKTLAEVCTSKNSNIVLSSIENNTGKYPIYGAKGFLKTIDFYTIENESLGIVKDGAGVGRIFLLPEKSSL
IGTMAYIQANENLNLKYLYHFLHTINFNQYISGSAIPHIYFRDYKKEKIPLPPLEVQKAIVEKLENAFAHIDEAVRHLKS
VQTNIPRLKSSLLHCAFSGKLTESQNSSHKVQTLKSVVGVEGEFEREEGATSPFKPLHPLIKEEIPQGWEIKTLGEVFKV
IGGGTPSTANPKFWSGNIAWITSANIENENFTIIPKKFINQSAIQASATNLVPKNTIIVVTRVGLGKVGITDVETCFSQD
SQALLPLIDLNVKFMAFQIRNKAQNFIVSSRGTTINGITKDTLKKVALKIPPLATQNQIVQILESKFAHLEKLEQFVNAS
LENLQKLKSSLLNQAFKGELIC
>Mature_422_residues
MINNIPKNWEIKTLAEVCTSKNSNIVLSSIENNTGKYPIYGAKGFLKTIDFYTIENESLGIVKDGAGVGRIFLLPEKSSL
IGTMAYIQANENLNLKYLYHFLHTINFNQYISGSAIPHIYFRDYKKEKIPLPPLEVQKAIVEKLENAFAHIDEAVRHLKS
VQTNIPRLKSSLLHCAFSGKLTESQNSSHKVQTLKSVVGVEGEFEREEGATSPFKPLHPLIKEEIPQGWEIKTLGEVFKV
IGGGTPSTANPKFWSGNIAWITSANIENENFTIIPKKFINQSAIQASATNLVPKNTIIVVTRVGLGKVGITDVETCFSQD
SQALLPLIDLNVKFMAFQIRNKAQNFIVSSRGTTINGITKDTLKKVALKIPPLATQNQIVQILESKFAHLEKLEQFVNAS
LENLQKLKSSLLNQAFKGELIC

Specific function: The M and S subunits together form a methyltransferase (MTase) that methylates two adenine residues in complementary strands of a bipartite DNA recognition sequence. In the presence of the R subunit the complex can also act as an endonuclease, binding to

COG id: COG0732

COG function: function code V; Restriction endonuclease S subunits

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the type-I restriction system S methylase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000055 [H]

Pfam domain/function: PF01420 Methylase_S [H]

EC number: NA

Molecular weight: Translated: 46923; Mature: 46923

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINNIPKNWEIKTLAEVCTSKNSNIVLSSIENNTGKYPIYGAKGFLKTIDFYTIENESLG
CCCCCCCCCCHHHHHHHHCCCCCCEEEEECCCCCCCCCEECCCHHHHEEEEEEECCCCCE
IVKDGAGVGRIFLLPEKSSLIGTMAYIQANENLNLKYLYHFLHTINFNQYISGSAIPHIY
EEECCCCCCEEEEEECCCHHHEEEEEEEECCCCCHHHHHHHHHHCCCCCEECCCCCCCCE
FRDYKKEKIPLPPLEVQKAIVEKLENAFAHIDEAVRHLKSVQTNIPRLKSSLLHCAFSGK
EECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
LTESQNSSHKVQTLKSVVGVEGEFEREEGATSPFKPLHPLIKEEIPQGWEIKTLGEVFKV
CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHH
IGGGTPSTANPKFWSGNIAWITSANIENENFTIIPKKFINQSAIQASATNLVPKNTIIVV
HCCCCCCCCCCCEECCCEEEEEECCCCCCCEEECCHHHCCHHHHHHHHHCCCCCCEEEEE
TRVGLGKVGITDVETCFSQDSQALLPLIDLNVKFMAFQIRNKAQNFIVSSRGTTINGITK
EECCCCCCCCHHHHHHHCCCCCCCCCEEECCEEEEEEEHHHHHHHEEEECCCCEECCCCH
DTLKKVALKIPPLATQNQIVQILESKFAHLEKLEQFVNASLENLQKLKSSLLNQAFKGEL
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
IC
CC
>Mature Secondary Structure
MINNIPKNWEIKTLAEVCTSKNSNIVLSSIENNTGKYPIYGAKGFLKTIDFYTIENESLG
CCCCCCCCCCHHHHHHHHCCCCCCEEEEECCCCCCCCCEECCCHHHHEEEEEEECCCCCE
IVKDGAGVGRIFLLPEKSSLIGTMAYIQANENLNLKYLYHFLHTINFNQYISGSAIPHIY
EEECCCCCCEEEEEECCCHHHEEEEEEEECCCCCHHHHHHHHHHCCCCCEECCCCCCCCE
FRDYKKEKIPLPPLEVQKAIVEKLENAFAHIDEAVRHLKSVQTNIPRLKSSLLHCAFSGK
EECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
LTESQNSSHKVQTLKSVVGVEGEFEREEGATSPFKPLHPLIKEEIPQGWEIKTLGEVFKV
CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHH
IGGGTPSTANPKFWSGNIAWITSANIENENFTIIPKKFINQSAIQASATNLVPKNTIIVV
HCCCCCCCCCCCEECCCEEEEEECCCCCCCEEECCHHHCCHHHHHHHHHCCCCCCEEEEE
TRVGLGKVGITDVETCFSQDSQALLPLIDLNVKFMAFQIRNKAQNFIVSSRGTTINGITK
EECCCCCCCCHHHHHHHCCCCCCCCCEEECCEEEEEEEHHHHHHHEEEECCCCEECCCCH
DTLKKVALKIPPLATQNQIVQILESKFAHLEKLEQFVNASLENLQKLKSSLLNQAFKGEL
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
IC
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: Hydrolase; Acting on ester bonds [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]