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The map label for this gene is yrbI [C]

Identifier: 32266825

GI number: 32266825

Start: 1284934

End: 1285428

Strand: Direct

Name: yrbI [C]

Synonym: HH1326

Alternate gene names: 32266825

Gene position: 1284934-1285428 (Clockwise)

Preceding gene: 32266824

Following gene: 32266826

Centisome position: 71.42

GC content: 35.96

Gene sequence:

>495_bases
ATGATAAAACTTTTAGTCTTTGATGTTGATGGGACATTAAGTGATGGTAAAGTGTATTATTCGCAATCGGGAGAAGAAAT
AAAAAGTTTTAGCACGCGTGATGGTTTAGCGATTAGTGTATGGAATCGTCAAATGCGCCGCGCAAGTGCTATTATCACAG
GTAGAGAATCTGATATAGTGCGCAAGCGTGCAAAAGAGCTAGGCATAGAGCATATTTTTATGGCGTGTGAGCATAAAGGT
AAGGTATTACAAGATCTTGTATCGCAACTTAAAATGGATATGTCTGAAGTGGCTTGTATTGGTGATGATTTAAATGATTT
GAGTATGTTTAAAATTTGTGCAAAGGCGTATATGCCAAAAAATGGCGCAAAAGCACTCAAAAAATATGCGTATAAGATTC
TTAAACACTCTGGCGGTAATGGTGCAGTGCGTGAAATGATAGAAGATGTCTTAAAACTTAATGGAGATAAAAAGCTTGAA
AAATATTTCTTATAG

Upstream 100 bases:

>100_bases
ATCATATTATTGAAGCGATGTTTAAAGCTTTTGGTGTATCTTTGCGCCGCGCACTCACATTAAATCCAAGAATCCTCACT
CCATCAACAAAAGGTGTATT

Downstream 100 bases:

>100_bases
AATCTATGCTTTTTTTATTGCGTTACTTGGTTTTAGTTTGAGCAGCATTGTATTTTTTACTTCCAATAATGAACTTTATG
CGAATATTGGTAAAGAAGTG

Product: hypothetical protein

Products: NA

Alternate protein names: KDO 8-P phosphatase [H]

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MIKLLVFDVDGTLSDGKVYYSQSGEEIKSFSTRDGLAISVWNRQMRRASAIITGRESDIVRKRAKELGIEHIFMACEHKG
KVLQDLVSQLKMDMSEVACIGDDLNDLSMFKICAKAYMPKNGAKALKKYAYKILKHSGGNGAVREMIEDVLKLNGDKKLE
KYFL

Sequences:

>Translated_164_residues
MIKLLVFDVDGTLSDGKVYYSQSGEEIKSFSTRDGLAISVWNRQMRRASAIITGRESDIVRKRAKELGIEHIFMACEHKG
KVLQDLVSQLKMDMSEVACIGDDLNDLSMFKICAKAYMPKNGAKALKKYAYKILKHSGGNGAVREMIEDVLKLNGDKKLE
KYFL
>Mature_164_residues
MIKLLVFDVDGTLSDGKVYYSQSGEEIKSFSTRDGLAISVWNRQMRRASAIITGRESDIVRKRAKELGIEHIFMACEHKG
KVLQDLVSQLKMDMSEVACIGDDLNDLSMFKICAKAYMPKNGAKALKKYAYKILKHSGGNGAVREMIEDVLKLNGDKKLE
KYFL

Specific function: Catalyzes the hydrolysis of KDO 8-P to KDO and inorganic phosphate [H]

COG id: COG1778

COG function: function code R; Low specificity phosphatase (HAD superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the kdsC family [H]

Homologues:

Organism=Escherichia coli, GI2367202, Length=154, Percent_Identity=35.7142857142857, Blast_Score=91, Evalue=3e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023214
- InterPro:   IPR013200
- InterPro:   IPR006549
- InterPro:   IPR010023 [H]

Pfam domain/function: PF08282 Hydrolase_3 [H]

EC number: =3.1.3.45 [H]

Molecular weight: Translated: 18458; Mature: 18458

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKLLVFDVDGTLSDGKVYYSQSGEEIKSFSTRDGLAISVWNRQMRRASAIITGRESDIV
CEEEEEEECCCCCCCCEEEECCCCHHHHHCCCCCCCEEHHHHHHHHHHHHHHCCCHHHHH
RKRAKELGIEHIFMACEHKGKVLQDLVSQLKMDMSEVACIGDDLNDLSMFKICAKAYMPK
HHHHHHHCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC
NGAKALKKYAYKILKHSGGNGAVREMIEDVLKLNGDKKLEKYFL
CHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHCC
>Mature Secondary Structure
MIKLLVFDVDGTLSDGKVYYSQSGEEIKSFSTRDGLAISVWNRQMRRASAIITGRESDIV
CEEEEEEECCCCCCCCEEEECCCCHHHHHCCCCCCCEEHHHHHHHHHHHHHHCCCHHHHH
RKRAKELGIEHIFMACEHKGKVLQDLVSQLKMDMSEVACIGDDLNDLSMFKICAKAYMPK
HHHHHHHCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC
NGAKALKKYAYKILKHSGGNGAVREMIEDVLKLNGDKKLEKYFL
CHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 12639950; 11835514 [H]