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The map label for this gene is yedE [H]

Identifier: 32266797

GI number: 32266797

Start: 1258222

End: 1259448

Strand: Direct

Name: yedE [H]

Synonym: HH1298

Alternate gene names: 32266797

Gene position: 1258222-1259448 (Clockwise)

Preceding gene: 32266792

Following gene: 32266798

Centisome position: 69.93

GC content: 43.44

Gene sequence:

>1227_bases
ATGTTTGAGGATTTCAAGCAAAGATTCCTAGTCAAATTTTGGTCGCCTATGCCCGCGATTATCGCACTTGGCGTAATGGC
TGCTTATTATTTTGGTTTGACTGGGACTTATTGGGCTGTTACAGGTGAATTTACGCGTTGGGGCGGACATATTATGAATC
TTTTGGGTGTGGATACAAGCACTTGGGGTTATTTTAAGATTCTAGGTTTGCAAGGAACACCGCTAGATAGGGTAGATGGC
GTGATGATTATTGGAATGTTTACAGGGGCGTTTGCCGCTGCGGCAATGGCAAATAATGTCAAGTTTCGTTTGCCTCAAAG
CAATATTAGAATCGCTCAAGCCCTTATCGGTGGGATTATTGCAGGATTTGGTGCGAGGATTGGTATGGGTTGTAATTTGG
CGAGTTTCTTTACGGGGATTCCACAATTTAGCTTGCACGCGTGGTTTTTTACGATTATGACGCTTGTTGGTGTGTGGCTA
GGCACAAAGGTTGTTTTACTCTCACTTTTTCGCTCTCATACAAAGCTAGAGAAAGTCAGTGCGCAAAAAGACATTGGAAA
TAGCAAAGAAAATCAGAGTAGGGCAAAACTCCTTTTTGCACTTGGTGTTTTGGTATTAGTTGGAATTGGCGTTTGGGTAG
CGTATCTAATGGCGTATGGCAATATTCCAGAGGGTAAGAAGATTCCGATTTTAGCACTTGCAGTTGTATTTGGTGTGGGA
TTTGGCTTTATCATCTCACGTGCGCAGATTTGCTTTACTTCTGCCTTTAGGGATTTATTTATCACAGGGCGTGGATATAT
GGCAAGAGCGGTGATTGTTGGAATGATGGTTTCAACTATTGGCGTTTTTAGTTACATTATGCTTGGACTTCCGCCTAAAA
TTATGTGGGCTGCGCCAAATGCAGTGATTGGCGGATTGCTCTTTGGCTTTGGTATTGTGATTGCAGGAGGGTGTGAATGT
GGCTGGATGTATCGCGCGGTTGAGGGGCAGGTGCATTATTGGATTGTAGGTGTTGGTAATGTCATTGGCTCTACGCTTTT
GGCAGCGACTTGGGATTATTATTCTGTGCCGCTTGCGACAAGCTTCCCTAAAATCAATCTTTTAGAATCCTTTGGTAATT
ATGGCGGCTTGGTGGTAAGCTATGTGCTGCTTTTTGCATTCCTTGCCTTTGTGCTGTTTCTTGAGCGGCGATATTTTGCC
AAAAATAAACGATTTGAACGCGCATAA

Upstream 100 bases:

>100_bases
CTATCTTAGAAAGGCTTTCGTGTAAAGCATTACATTAGAGACGCATCATACTTCTTTTTCTTACGCACTCTAATTTTATT
TTGTTATTTTGGGGAATGTT

Downstream 100 bases:

>100_bases
AGGAGGAGAATATGCAACAAGAAATTATCCCAAATTTTAGATTAGACTTGCAAGGTGAGCCTTGCCCTTATCCTGCGGTA
AGAACTCTGGAGGTTTTGCC

Product: putative inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 408; Mature: 408

Protein sequence:

>408_residues
MFEDFKQRFLVKFWSPMPAIIALGVMAAYYFGLTGTYWAVTGEFTRWGGHIMNLLGVDTSTWGYFKILGLQGTPLDRVDG
VMIIGMFTGAFAAAAMANNVKFRLPQSNIRIAQALIGGIIAGFGARIGMGCNLASFFTGIPQFSLHAWFFTIMTLVGVWL
GTKVVLLSLFRSHTKLEKVSAQKDIGNSKENQSRAKLLFALGVLVLVGIGVWVAYLMAYGNIPEGKKIPILALAVVFGVG
FGFIISRAQICFTSAFRDLFITGRGYMARAVIVGMMVSTIGVFSYIMLGLPPKIMWAAPNAVIGGLLFGFGIVIAGGCEC
GWMYRAVEGQVHYWIVGVGNVIGSTLLAATWDYYSVPLATSFPKINLLESFGNYGGLVVSYVLLFAFLAFVLFLERRYFA
KNKRFERA

Sequences:

>Translated_408_residues
MFEDFKQRFLVKFWSPMPAIIALGVMAAYYFGLTGTYWAVTGEFTRWGGHIMNLLGVDTSTWGYFKILGLQGTPLDRVDG
VMIIGMFTGAFAAAAMANNVKFRLPQSNIRIAQALIGGIIAGFGARIGMGCNLASFFTGIPQFSLHAWFFTIMTLVGVWL
GTKVVLLSLFRSHTKLEKVSAQKDIGNSKENQSRAKLLFALGVLVLVGIGVWVAYLMAYGNIPEGKKIPILALAVVFGVG
FGFIISRAQICFTSAFRDLFITGRGYMARAVIVGMMVSTIGVFSYIMLGLPPKIMWAAPNAVIGGLLFGFGIVIAGGCEC
GWMYRAVEGQVHYWIVGVGNVIGSTLLAATWDYYSVPLATSFPKINLLESFGNYGGLVVSYVLLFAFLAFVLFLERRYFA
KNKRFERA
>Mature_408_residues
MFEDFKQRFLVKFWSPMPAIIALGVMAAYYFGLTGTYWAVTGEFTRWGGHIMNLLGVDTSTWGYFKILGLQGTPLDRVDG
VMIIGMFTGAFAAAAMANNVKFRLPQSNIRIAQALIGGIIAGFGARIGMGCNLASFFTGIPQFSLHAWFFTIMTLVGVWL
GTKVVLLSLFRSHTKLEKVSAQKDIGNSKENQSRAKLLFALGVLVLVGIGVWVAYLMAYGNIPEGKKIPILALAVVFGVG
FGFIISRAQICFTSAFRDLFITGRGYMARAVIVGMMVSTIGVFSYIMLGLPPKIMWAAPNAVIGGLLFGFGIVIAGGCEC
GWMYRAVEGQVHYWIVGVGNVIGSTLLAATWDYYSVPLATSFPKINLLESFGNYGGLVVSYVLLFAFLAFVLFLERRYFA
KNKRFERA

Specific function: Unknown

COG id: COG2391

COG function: function code R; Predicted transporter component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0394 family [H]

Homologues:

Organism=Escherichia coli, GI1788238, Length=400, Percent_Identity=61.75, Blast_Score=475, Evalue=1e-135,
Organism=Escherichia coli, GI1788323, Length=103, Percent_Identity=40.7766990291262, Blast_Score=75, Evalue=7e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007272 [H]

Pfam domain/function: PF04143 DUF395 [H]

EC number: NA

Molecular weight: Translated: 44658; Mature: 44658

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFEDFKQRFLVKFWSPMPAIIALGVMAAYYFGLTGTYWAVTGEFTRWGGHIMNLLGVDTS
CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCCC
TWGYFKILGLQGTPLDRVDGVMIIGMFTGAFAAAAMANNVKFRLPQSNIRIAQALIGGII
CCCEEEEEECCCCCCHHHCCEEEEHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHH
AGFGARIGMGCNLASFFTGIPQFSLHAWFFTIMTLVGVWLGTKVVLLSLFRSHTKLEKVS
HHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQKDIGNSKENQSRAKLLFALGVLVLVGIGVWVAYLMAYGNIPEGKKIPILALAVVFGVG
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
FGFIISRAQICFTSAFRDLFITGRGYMARAVIVGMMVSTIGVFSYIMLGLPPKIMWAAPN
HHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCH
AVIGGLLFGFGIVIAGGCECGWMYRAVEGQVHYWIVGVGNVIGSTLLAATWDYYSVPLAT
HHHHHHHHHHHHHHCCCCCCCHHHHEECCCEEEEEEEHHHHHHHHHHHHHCCHHCCCCCC
SFPKINLLESFGNYGGLVVSYVLLFAFLAFVLFLERRYFAKNKRFERA
CCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MFEDFKQRFLVKFWSPMPAIIALGVMAAYYFGLTGTYWAVTGEFTRWGGHIMNLLGVDTS
CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCCC
TWGYFKILGLQGTPLDRVDGVMIIGMFTGAFAAAAMANNVKFRLPQSNIRIAQALIGGII
CCCEEEEEECCCCCCHHHCCEEEEHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHH
AGFGARIGMGCNLASFFTGIPQFSLHAWFFTIMTLVGVWLGTKVVLLSLFRSHTKLEKVS
HHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQKDIGNSKENQSRAKLLFALGVLVLVGIGVWVAYLMAYGNIPEGKKIPILALAVVFGVG
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
FGFIISRAQICFTSAFRDLFITGRGYMARAVIVGMMVSTIGVFSYIMLGLPPKIMWAAPN
HHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCH
AVIGGLLFGFGIVIAGGCECGWMYRAVEGQVHYWIVGVGNVIGSTLLAATWDYYSVPLAT
HHHHHHHHHHHHHHCCCCCCCHHHHEECCCEEEEEEEHHHHHHHHHHHHHCCHHCCCCCC
SFPKINLLESFGNYGGLVVSYVLLFAFLAFVLFLERRYFAKNKRFERA
CCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8371104; 9097040; 9278503 [H]