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The map label for this gene is yedF [H]

Identifier: 32266798

GI number: 32266798

Start: 1259460

End: 1259699

Strand: Direct

Name: yedF [H]

Synonym: HH1299

Alternate gene names: 32266798

Gene position: 1259460-1259699 (Clockwise)

Preceding gene: 32266797

Following gene: 32266799

Centisome position: 70.0

GC content: 41.67

Gene sequence:

>240_bases
ATGCAACAAGAAATTATCCCAAATTTTAGATTAGACTTGCAAGGTGAGCCTTGCCCTTATCCTGCGGTAAGAACTCTGGA
GGTTTTGCCTGAGCTTAAAAGTGGCGAGATTTTGGAAGTGCTAAGTGATTGCCCACAAAGCATTAATAATATCCCCATTG
ATGCGAAAAATCACGGCTATGAAGTGTTAGGAGTAGAGCAGCTAGGAGCCACGATAAGGTATCTTATCAAGAAGCCTTAA

Upstream 100 bases:

>100_bases
GCTATGTGCTGCTTTTTGCATTCCTTGCCTTTGTGCTGTTTCTTGAGCGGCGATATTTTGCCAAAAATAAACGATTTGAA
CGCGCATAAAGGAGGAGAAT

Downstream 100 bases:

>100_bases
AATATGCAGATTAAGATGTTTAAGCAAAATTATTTTATAATGCGACATTTTAAAACTTCGGGGGAGTAGCAATGGCAAGA
AAGGCTTGTAATATAATTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 79; Mature: 79

Protein sequence:

>79_residues
MQQEIIPNFRLDLQGEPCPYPAVRTLEVLPELKSGEILEVLSDCPQSINNIPIDAKNHGYEVLGVEQLGATIRYLIKKP

Sequences:

>Translated_79_residues
MQQEIIPNFRLDLQGEPCPYPAVRTLEVLPELKSGEILEVLSDCPQSINNIPIDAKNHGYEVLGVEQLGATIRYLIKKP
>Mature_79_residues
MQQEIIPNFRLDLQGEPCPYPAVRTLEVLPELKSGEILEVLSDCPQSINNIPIDAKNHGYEVLGVEQLGATIRYLIKKP

Specific function: Unknown

COG id: COG0425

COG function: function code O; Predicted redox protein, regulator of disulfide bond formation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0033 family [H]

Homologues:

Organism=Escherichia coli, GI1788239, Length=76, Percent_Identity=71.0526315789474, Blast_Score=121, Evalue=8e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001455 [H]

Pfam domain/function: PF01206 SirA [H]

EC number: NA

Molecular weight: Translated: 8857; Mature: 8857

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: PS01148 UPF0033

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQEIIPNFRLDLQGEPCPYPAVRTLEVLPELKSGEILEVLSDCPQSINNIPIDAKNHGY
CCCCCCCCCEEECCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCE
EVLGVEQLGATIRYLIKKP
EEEEHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQQEIIPNFRLDLQGEPCPYPAVRTLEVLPELKSGEILEVLSDCPQSINNIPIDAKNHGY
CCCCCCCCCEEECCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCE
EVLGVEQLGATIRYLIKKP
EEEEHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]