| Definition | Helicobacter hepaticus ATCC 51449 chromosome, complete genome. |
|---|---|
| Accession | NC_004917 |
| Length | 1,799,146 |
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The map label for this gene is 32266686
Identifier: 32266686
GI number: 32266686
Start: 1153450
End: 1154892
Strand: Direct
Name: 32266686
Synonym: HH1187
Alternate gene names: NA
Gene position: 1153450-1154892 (Clockwise)
Preceding gene: 32266685
Following gene: 32266687
Centisome position: 64.11
GC content: 37.98
Gene sequence:
>1443_bases ATGAAAAAATGGCTTATATTGCTATGTATGATAAGTGCATTTGTAGGGTGTGGTAATGAAGAAAATGAGATAAAGCAAAA CCTGCAAGAGAAAAATCAAGAAGTGCAACAAGAAAATGTGAGCCAAACCAAAGAATCACAAAATCAATCCAAAGAAACTT TTATCAATGAAGAAAGAAGTTTGCGCTCACAAAGTCCTCAAAAATGGTTAGAAAAATATGATGTTAATGCTAAAGATTCC AATGGAGAGACTTTGCTTATGTTTTTTGCAGCCTATGGGAGTGATGATGAGGTGAAATATCTTCTTGCACAAGGTGCAGA TGTGAATGCTACAGATAAGCAAGGACAGAGTGCATTATTTTACGCGCTTTTTTGTGGAGCAGAGGGTTGTATATTTGATA AGGTTAAAACTCTTGTAGAAGCTGGGGCTAATGTAAATGCGAAAAATGCACAAGGCGATAGTGTGTTGCGCGTGGCACTT GGTTCAAGTGAGGAGATAGAGGAATACTTAAAAAGCAAGGGCGCACTAGATTCTAAAAGCTTTGATGAGAGCGTAAATAA TTTGAGTGAGCAGGAGATAAGCCGCATTGCTAATCCTCGTTTGGTAGAGGTAGTGCGCACATATAATGGCAAAGTGGGTA TAAAGTGTATAGCAGAGCTTTTGCAGAGTGATAACATTGATGAAGTTTTAAAAGAGGAACAAGAAGTTTCTAAAGATATA TATGCGTATGAAGGACAGAGTGCATTGCTTCTTGCTGCAAAATTTGGCTATGATGAGTTAGTAGCTACACTATTAGAGCT TGGAGCAAATCCAAATGTTATAGGATATTATACAACGCCACTCCTTGAGGCGGCTACAAACAATTATTATCATATCTCAA AATTGTTGCTTGAACACGGAGCAGATGTAAATTTACGCGCACAAGATAATGGAACTACGCCTATTATTGCGCTTGTAGAG GGTAAAAGCAAAGGACTTTTATCTATTAAAGATGAAAAAGAGCGCACAAAAGAGGAAGATAAAGCCCGCATACCGCTTTT AGAATTGCTTATAAAATCTGGGGGTGATGTCAATGCACAAGATTTTGCACGTGAGGGGGATAACATAAATGCACTCTTTT CAGCATTAGAGCTAGAGAGGGGGAATCTCGCAGTGCTTTTAATACAATCAGGCGCAGATATCAAAGATGAAAGGTATCCA CCTCTAAATGACGCGGTCAAATATGGGTTAGTCAATGCAGTAGAGGCATTACTCAAAGCAGGTGCAAATCCTATGCAAAA AGATTTATTTTATCAAACAAGTGCATTAGATATTATTGGTGAGAATAAGCTTGAACGAATGAGTAGTGAATATGCAAGAA CACTTTTTCATTCTTTGGAGCCAGAGAAGCAATCGCGTATCAAAGAGCTTATAAACCAAGCGATAGAGACTATAAATCCC TAA
Upstream 100 bases:
>100_bases CTCTCTTTTGTTGCATTATTATTTTCGAGTGATTTTAGAGCAAATTCTGTTAAAATTTTGGTAATATTTAAATTCAAAAT GAAATAAAAAAGGAGTGGGA
Downstream 100 bases:
>100_bases AATACGAGAAGGAAGAGATATTGTGCGAACATAAGGCACGTAAAGCAGAGGCAAAGCCACGCATTTTGATTCTTGCAGCA GCAAATATTAATACTTGTCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 480; Mature: 480
Protein sequence:
>480_residues MKKWLILLCMISAFVGCGNEENEIKQNLQEKNQEVQQENVSQTKESQNQSKETFINEERSLRSQSPQKWLEKYDVNAKDS NGETLLMFFAAYGSDDEVKYLLAQGADVNATDKQGQSALFYALFCGAEGCIFDKVKTLVEAGANVNAKNAQGDSVLRVAL GSSEEIEEYLKSKGALDSKSFDESVNNLSEQEISRIANPRLVEVVRTYNGKVGIKCIAELLQSDNIDEVLKEEQEVSKDI YAYEGQSALLLAAKFGYDELVATLLELGANPNVIGYYTTPLLEAATNNYYHISKLLLEHGADVNLRAQDNGTTPIIALVE GKSKGLLSIKDEKERTKEEDKARIPLLELLIKSGGDVNAQDFAREGDNINALFSALELERGNLAVLLIQSGADIKDERYP PLNDAVKYGLVNAVEALLKAGANPMQKDLFYQTSALDIIGENKLERMSSEYARTLFHSLEPEKQSRIKELINQAIETINP
Sequences:
>Translated_480_residues MKKWLILLCMISAFVGCGNEENEIKQNLQEKNQEVQQENVSQTKESQNQSKETFINEERSLRSQSPQKWLEKYDVNAKDS NGETLLMFFAAYGSDDEVKYLLAQGADVNATDKQGQSALFYALFCGAEGCIFDKVKTLVEAGANVNAKNAQGDSVLRVAL GSSEEIEEYLKSKGALDSKSFDESVNNLSEQEISRIANPRLVEVVRTYNGKVGIKCIAELLQSDNIDEVLKEEQEVSKDI YAYEGQSALLLAAKFGYDELVATLLELGANPNVIGYYTTPLLEAATNNYYHISKLLLEHGADVNLRAQDNGTTPIIALVE GKSKGLLSIKDEKERTKEEDKARIPLLELLIKSGGDVNAQDFAREGDNINALFSALELERGNLAVLLIQSGADIKDERYP PLNDAVKYGLVNAVEALLKAGANPMQKDLFYQTSALDIIGENKLERMSSEYARTLFHSLEPEKQSRIKELINQAIETINP >Mature_480_residues MKKWLILLCMISAFVGCGNEENEIKQNLQEKNQEVQQENVSQTKESQNQSKETFINEERSLRSQSPQKWLEKYDVNAKDS NGETLLMFFAAYGSDDEVKYLLAQGADVNATDKQGQSALFYALFCGAEGCIFDKVKTLVEAGANVNAKNAQGDSVLRVAL GSSEEIEEYLKSKGALDSKSFDESVNNLSEQEISRIANPRLVEVVRTYNGKVGIKCIAELLQSDNIDEVLKEEQEVSKDI YAYEGQSALLLAAKFGYDELVATLLELGANPNVIGYYTTPLLEAATNNYYHISKLLLEHGADVNLRAQDNGTTPIIALVE GKSKGLLSIKDEKERTKEEDKARIPLLELLIKSGGDVNAQDFAREGDNINALFSALELERGNLAVLLIQSGADIKDERYP PLNDAVKYGLVNAVEALLKAGANPMQKDLFYQTSALDIIGENKLERMSSEYARTLFHSLEPEKQSRIKELINQAIETINP
Specific function: Unknown
COG id: COG0666
COG function: function code R; FOG: Ankyrin repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 18 ANK repeats [H]
Homologues:
Organism=Homo sapiens, GI38683816, Length=373, Percent_Identity=29.4906166219839, Blast_Score=85, Evalue=1e-16, Organism=Homo sapiens, GI38683807, Length=373, Percent_Identity=29.4906166219839, Blast_Score=83, Evalue=5e-16, Organism=Homo sapiens, GI13376842, Length=422, Percent_Identity=26.5402843601896, Blast_Score=82, Evalue=1e-15, Organism=Homo sapiens, GI46519147, Length=372, Percent_Identity=27.4193548387097, Blast_Score=78, Evalue=2e-14, Organism=Homo sapiens, GI37620163, Length=372, Percent_Identity=27.4193548387097, Blast_Score=78, Evalue=2e-14, Organism=Homo sapiens, GI24233530, Length=385, Percent_Identity=26.4935064935065, Blast_Score=76, Evalue=9e-14, Organism=Homo sapiens, GI268607595, Length=382, Percent_Identity=26.9633507853403, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI87239981, Length=393, Percent_Identity=26.2086513994911, Blast_Score=75, Evalue=2e-13, Organism=Homo sapiens, GI62988328, Length=382, Percent_Identity=26.9633507853403, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI46519151, Length=369, Percent_Identity=28.4552845528455, Blast_Score=74, Evalue=4e-13, Organism=Homo sapiens, GI46519154, Length=368, Percent_Identity=28.5326086956522, Blast_Score=73, Evalue=7e-13, Organism=Homo sapiens, GI70780355, Length=406, Percent_Identity=24.6305418719212, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI32967601, Length=375, Percent_Identity=27.2, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI70780357, Length=406, Percent_Identity=24.6305418719212, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI215598574, Length=366, Percent_Identity=27.3224043715847, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI70780353, Length=406, Percent_Identity=24.6305418719212, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI70780359, Length=406, Percent_Identity=24.6305418719212, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI52426737, Length=371, Percent_Identity=26.1455525606469, Blast_Score=70, Evalue=6e-12, Organism=Homo sapiens, GI188595682, Length=371, Percent_Identity=26.1455525606469, Blast_Score=69, Evalue=8e-12, Organism=Homo sapiens, GI55741641, Length=331, Percent_Identity=26.2839879154079, Blast_Score=69, Evalue=1e-11, Organism=Homo sapiens, GI7705831, Length=215, Percent_Identity=28.3720930232558, Blast_Score=68, Evalue=2e-11, Organism=Homo sapiens, GI255982572, Length=215, Percent_Identity=28.3720930232558, Blast_Score=68, Evalue=2e-11, Organism=Homo sapiens, GI68131557, Length=403, Percent_Identity=27.0471464019851, Blast_Score=67, Evalue=4e-11, Organism=Homo sapiens, GI52426735, Length=371, Percent_Identity=26.1455525606469, Blast_Score=67, Evalue=5e-11, Organism=Caenorhabditis elegans, GI17542700, Length=365, Percent_Identity=27.6712328767123, Blast_Score=86, Evalue=5e-17, Organism=Caenorhabditis elegans, GI25145251, Length=365, Percent_Identity=27.6712328767123, Blast_Score=86, Evalue=6e-17, Organism=Caenorhabditis elegans, GI71981389, Length=365, Percent_Identity=27.6712328767123, Blast_Score=85, Evalue=7e-17, Organism=Caenorhabditis elegans, GI71981414, Length=365, Percent_Identity=27.6712328767123, Blast_Score=85, Evalue=1e-16, Organism=Caenorhabditis elegans, GI71981411, Length=368, Percent_Identity=27.9891304347826, Blast_Score=81, Evalue=1e-15, Organism=Drosophila melanogaster, GI28571867, Length=371, Percent_Identity=29.6495956873315, Blast_Score=81, Evalue=1e-15, Organism=Drosophila melanogaster, GI28571865, Length=371, Percent_Identity=29.6495956873315, Blast_Score=81, Evalue=1e-15, Organism=Drosophila melanogaster, GI161082089, Length=278, Percent_Identity=30.2158273381295, Blast_Score=78, Evalue=2e-14, Organism=Drosophila melanogaster, GI161082085, Length=278, Percent_Identity=30.2158273381295, Blast_Score=77, Evalue=4e-14, Organism=Drosophila melanogaster, GI161082099, Length=278, Percent_Identity=30.2158273381295, Blast_Score=76, Evalue=4e-14, Organism=Drosophila melanogaster, GI161082110, Length=278, Percent_Identity=30.2158273381295, Blast_Score=75, Evalue=9e-14, Organism=Drosophila melanogaster, GI161082106, Length=278, Percent_Identity=30.2158273381295, Blast_Score=75, Evalue=9e-14, Organism=Drosophila melanogaster, GI161082096, Length=278, Percent_Identity=30.2158273381295, Blast_Score=75, Evalue=9e-14, Organism=Drosophila melanogaster, GI24650843, Length=398, Percent_Identity=26.1306532663317, Blast_Score=75, Evalue=1e-13, Organism=Drosophila melanogaster, GI161082081, Length=278, Percent_Identity=30.2158273381295, Blast_Score=75, Evalue=1e-13, Organism=Drosophila melanogaster, GI24581260, Length=249, Percent_Identity=28.9156626506024, Blast_Score=72, Evalue=6e-13, Organism=Drosophila melanogaster, GI24581258, Length=249, Percent_Identity=28.9156626506024, Blast_Score=72, Evalue=6e-13, Organism=Drosophila melanogaster, GI21356741, Length=266, Percent_Identity=27.8195488721804, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI161082092, Length=196, Percent_Identity=33.1632653061224, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI281359521, Length=256, Percent_Identity=27.734375, Blast_Score=65, Evalue=1e-10, Organism=Drosophila melanogaster, GI281359519, Length=256, Percent_Identity=27.734375, Blast_Score=65, Evalue=1e-10, Organism=Drosophila melanogaster, GI28558752, Length=256, Percent_Identity=27.734375, Blast_Score=65, Evalue=1e-10, Organism=Drosophila melanogaster, GI28558750, Length=256, Percent_Identity=27.734375, Blast_Score=65, Evalue=1e-10, Organism=Drosophila melanogaster, GI28558756, Length=256, Percent_Identity=27.734375, Blast_Score=65, Evalue=1e-10, Organism=Drosophila melanogaster, GI28558754, Length=256, Percent_Identity=27.734375, Blast_Score=65, Evalue=1e-10, Organism=Drosophila melanogaster, GI221330482, Length=373, Percent_Identity=24.1286863270777, Blast_Score=65, Evalue=1e-10, Organism=Drosophila melanogaster, GI221330474, Length=373, Percent_Identity=24.1286863270777, Blast_Score=65, Evalue=1e-10,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002110 - InterPro: IPR020683 - InterPro: IPR007685 [H]
Pfam domain/function: PF00023 Ank; PF04607 RelA_SpoT [H]
EC number: NA
Molecular weight: Translated: 53213; Mature: 53213
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50088 ANK_REPEAT ; PS50297 ANK_REP_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKWLILLCMISAFVGCGNEENEIKQNLQEKNQEVQQENVSQTKESQNQSKETFINEERS CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRSQSPQKWLEKYDVNAKDSNGETLLMFFAAYGSDDEVKYLLAQGADVNATDKQGQSALF HHCCCHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCHHEE YALFCGAEGCIFDKVKTLVEAGANVNAKNAQGDSVLRVALGSSEEIEEYLKSKGALDSKS HHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCHH FDESVNNLSEQEISRIANPRLVEVVRTYNGKVGIKCIAELLQSDNIDEVLKEEQEVSKDI HHHHHHHCCHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHH YAYEGQSALLLAAKFGYDELVATLLELGANPNVIGYYTTPLLEAATNNYYHISKLLLEHG HHCCCCCEEEEEECCCHHHHHHHHHHHCCCCCEEEEEHHHHHHHHCCCHHHHHHHHHHCC ADVNLRAQDNGTTPIIALVEGKSKGLLSIKDEKERTKEEDKARIPLLELLIKSGGDVNAQ CCCEEEECCCCCCCEEEEEECCCCCCEEECCHHHHHHHHHHHCCHHHHHHHHCCCCCCHH DFAREGDNINALFSALELERGNLAVLLIQSGADIKDERYPPLNDAVKYGLVNAVEALLKA HHHHCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC GANPMQKDLFYQTSALDIIGENKLERMSSEYARTLFHSLEPEKQSRIKELINQAIETINP CCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKKWLILLCMISAFVGCGNEENEIKQNLQEKNQEVQQENVSQTKESQNQSKETFINEERS CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRSQSPQKWLEKYDVNAKDSNGETLLMFFAAYGSDDEVKYLLAQGADVNATDKQGQSALF HHCCCHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCHHEE YALFCGAEGCIFDKVKTLVEAGANVNAKNAQGDSVLRVALGSSEEIEEYLKSKGALDSKS HHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCHH FDESVNNLSEQEISRIANPRLVEVVRTYNGKVGIKCIAELLQSDNIDEVLKEEQEVSKDI HHHHHHHCCHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHH YAYEGQSALLLAAKFGYDELVATLLELGANPNVIGYYTTPLLEAATNNYYHISKLLLEHG HHCCCCCEEEEEECCCHHHHHHHHHHHCCCCCEEEEEHHHHHHHHCCCHHHHHHHHHHCC ADVNLRAQDNGTTPIIALVEGKSKGLLSIKDEKERTKEEDKARIPLLELLIKSGGDVNAQ CCCEEEECCCCCCCEEEEEECCCCCCEEECCHHHHHHHHHHHCCHHHHHHHHCCCCCCHH DFAREGDNINALFSALELERGNLAVLLIQSGADIKDERYPPLNDAVKYGLVNAVEALLKA HHHHCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC GANPMQKDLFYQTSALDIIGENKLERMSSEYARTLFHSLEPEKQSRIKELINQAIETINP CCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA