Definition Helicobacter hepaticus ATCC 51449 chromosome, complete genome.
Accession NC_004917
Length 1,799,146

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The map label for this gene is 32266685

Identifier: 32266685

GI number: 32266685

Start: 1150987

End: 1153290

Strand: Direct

Name: 32266685

Synonym: HH1186

Alternate gene names: NA

Gene position: 1150987-1153290 (Clockwise)

Preceding gene: 32266684

Following gene: 32266686

Centisome position: 63.97

GC content: 35.07

Gene sequence:

>2304_bases
ATGCCCCAGAAGAGTCGCTTCAAATTGAAAATATCCCACAGCCTACTACCCAAGTTTCCGAAAATGAAGAAAAGCAACCC
TAACTCTTTTGTGCAATTAGATTCTGCTTGGTCAGAGCCTACAACTTCTTTTCAACAATTTTCTACCCAAACTACAGAGC
AAATCTTGGCGTTTTTGCATATTTTTATTAATGCCTTGAATACTGCTACAAGCAAAGCACAAGTTGATTCTCTTATGAGA
GAGCTTTATGGCTTAAAACGTGATGATATAATCCTGATTCAATCTCATCAAGAAGGTGAAAAAATCCTTATGGATATAAT
CTCTCTTATAAGGGAAAAAATCTATAATTTCCTTTCTCAAGGGCATATTTGTGGAGTAGAATATTTTAACATTTTACTTT
TTGTTGATTCTTTGGCAAAGACACGCTTTGAGGTTGATACACGTTTTGCAATTTTTAATAAAATGGCAGAGGAAAGCCTT
TTTGCCAATGGAATAAGCGATGTTGAAAACCTTTTGCTCATTGAACTTTATATACTTTCAAAAGCACTAAGCACAATGCA
CAATTTTGAAGATATAATATGCGAATATATTTCACTTGTGATTCTCATAGATATCAATATTCCTTCTTCGCTTGAACATA
CAAGCTTTATTGTGGAGCGTTTTGAGGCACTTGGTGTAGATATGCGCTTATTGTTATCCGCACTTCAAATACAGCTTGAG
CCACAAACTTATTTTGCTCATTCTACTATCAGAAAAAGAAGTATTCTAAACTGGCAATTGCATTGTTTTTGGAATGTTTC
ACATTTTTTTAATCATCATTTGTGGCTTGAATTATATCCATTGTGGAAAGAAATATTTTATGTGCTTCTTAAAAAGGGTG
ATATAGAAAGCATTGATGAGGCAATGTATATGCAGTTTTTCATATATCATTTCTGTGGCAATAATTTTCATCACCAAGAG
CAATGGCGCAGATTCTGTGATGAAATTGATAGGGTAAGTGTGCAATATTACGAGGAATTTGCCAAAAATCAAGGTATTTA
TGGTGTTTCCAAAAAACAACAAAGTGATAAAATCCGCATTGGAATTTTGCGCGATAGGCTTGTGGCAAATTCTCCCTATA
AGGTTGAATATAGCCTTTTAAGTAATTTGATGCGCGATGAAGCATTTTTACAAAAATACGAAATAAAAGTTTATACAATG
AATCTTATTGAAAAAAGCGCAAATGATGAGCGCATTGTCCGCTCTTATGAAGAGATTGGCATAAGTGTTGTTGATGTTGT
CTCACCTTTTAATGCAAAAGGATTCTACAATTCTCATTTTCAAAAAGCACTTGCGCTTAAAGAGGCATTTCATCGCGATA
ATATCTCAATACTTATAAGCCCAAATAATGGCTATGGTATAAGTGATTTTCTTCTTGCATCAAGAAGTGCTCCTTTACAA
ATTTATTATTCTCACGGCAATTTTGTATATGATTTGTCTTGTATTGATGTTAAAATGACGCATATTTGCCAAAACAAGCC
ACGTATTGTTCACGAAGGTTATGAATTTTATGGTGTGCCTGTGAAAATGCAGGAGAGATTCTATAATCCACCTCTTACTT
TAGAATCTAAACAGCAAATAGATTCTATTCGTCTAAAATTTCCACAAGATGCTGTAATTCTAGGAAGTATCGGGCGTTTA
GTAAAATTGCAATCGCGCGAATATTGGCGTTGTGTGATTGAGATTATGCTTTGCTTTCCTAAAAGTATTTATCTAGCTTG
TGGAGGAGGCAATAGCTCACTTATCCGTGAGTGCATTATGGATTGTTTTGCAGACAAGGCAAAAGGTGAGATATTTTTAG
AGCGCATATATTTCACAGGCTATATTGATAGCACTATTTATGGGCATATCATTGATATATGGTTTGATAGTTTTCCGCTT
GAGCAAGGTGAAAGTCGTATTGAATATGTGGCAAAAGGTGGCTTAAGCCTTGTGATGAGCAAACAAAGCAAAGAGGAGCG
CACGCAGCATTTAGAGAAATGGATAGCACAATGGGCAACTCTCCCTCATCGCGATGGTTCGCTTAAGGGCAAAGAGGAGT
GTGAGAAAACCCATACTATTCTTATAGAATCCCATTTACCCCTTATTGCATTTTCTGAAGAAGATTACATTCAAAAGGGA
AAAGCTTTAGTTGAATTATTTACAAAAAAACAAACACAAAAAATAGCATCTCTTAGAGCTGTAATAGCTTATGGAAGGGC
TGCAAGCGATGAGTTTAGAGAAATAAAAGGAGTGCAAGCATTTAAAGAAGCAATTGCTTTCTAA

Upstream 100 bases:

>100_bases
TATGGTTATTTGAGTGTTGATGTGAAGCCATACGCGAGTGTAGGAGAGCTATCTTATGTATGGATTATTGACAGAGAAAT
CCCTCAACTAAGCATACAAG

Downstream 100 bases:

>100_bases
TTTGCTTTGGTATGAAATCATCACAAAAACACCTTTTAAAACAATTTTGTTTTATCAACCTCTCTTTTGTTGCATTATTA
TTTTCGAGTGATTTTAGAGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 767; Mature: 766

Protein sequence:

>767_residues
MPQKSRFKLKISHSLLPKFPKMKKSNPNSFVQLDSAWSEPTTSFQQFSTQTTEQILAFLHIFINALNTATSKAQVDSLMR
ELYGLKRDDIILIQSHQEGEKILMDIISLIREKIYNFLSQGHICGVEYFNILLFVDSLAKTRFEVDTRFAIFNKMAEESL
FANGISDVENLLLIELYILSKALSTMHNFEDIICEYISLVILIDINIPSSLEHTSFIVERFEALGVDMRLLLSALQIQLE
PQTYFAHSTIRKRSILNWQLHCFWNVSHFFNHHLWLELYPLWKEIFYVLLKKGDIESIDEAMYMQFFIYHFCGNNFHHQE
QWRRFCDEIDRVSVQYYEEFAKNQGIYGVSKKQQSDKIRIGILRDRLVANSPYKVEYSLLSNLMRDEAFLQKYEIKVYTM
NLIEKSANDERIVRSYEEIGISVVDVVSPFNAKGFYNSHFQKALALKEAFHRDNISILISPNNGYGISDFLLASRSAPLQ
IYYSHGNFVYDLSCIDVKMTHICQNKPRIVHEGYEFYGVPVKMQERFYNPPLTLESKQQIDSIRLKFPQDAVILGSIGRL
VKLQSREYWRCVIEIMLCFPKSIYLACGGGNSSLIRECIMDCFADKAKGEIFLERIYFTGYIDSTIYGHIIDIWFDSFPL
EQGESRIEYVAKGGLSLVMSKQSKEERTQHLEKWIAQWATLPHRDGSLKGKEECEKTHTILIESHLPLIAFSEEDYIQKG
KALVELFTKKQTQKIASLRAVIAYGRAASDEFREIKGVQAFKEAIAF

Sequences:

>Translated_767_residues
MPQKSRFKLKISHSLLPKFPKMKKSNPNSFVQLDSAWSEPTTSFQQFSTQTTEQILAFLHIFINALNTATSKAQVDSLMR
ELYGLKRDDIILIQSHQEGEKILMDIISLIREKIYNFLSQGHICGVEYFNILLFVDSLAKTRFEVDTRFAIFNKMAEESL
FANGISDVENLLLIELYILSKALSTMHNFEDIICEYISLVILIDINIPSSLEHTSFIVERFEALGVDMRLLLSALQIQLE
PQTYFAHSTIRKRSILNWQLHCFWNVSHFFNHHLWLELYPLWKEIFYVLLKKGDIESIDEAMYMQFFIYHFCGNNFHHQE
QWRRFCDEIDRVSVQYYEEFAKNQGIYGVSKKQQSDKIRIGILRDRLVANSPYKVEYSLLSNLMRDEAFLQKYEIKVYTM
NLIEKSANDERIVRSYEEIGISVVDVVSPFNAKGFYNSHFQKALALKEAFHRDNISILISPNNGYGISDFLLASRSAPLQ
IYYSHGNFVYDLSCIDVKMTHICQNKPRIVHEGYEFYGVPVKMQERFYNPPLTLESKQQIDSIRLKFPQDAVILGSIGRL
VKLQSREYWRCVIEIMLCFPKSIYLACGGGNSSLIRECIMDCFADKAKGEIFLERIYFTGYIDSTIYGHIIDIWFDSFPL
EQGESRIEYVAKGGLSLVMSKQSKEERTQHLEKWIAQWATLPHRDGSLKGKEECEKTHTILIESHLPLIAFSEEDYIQKG
KALVELFTKKQTQKIASLRAVIAYGRAASDEFREIKGVQAFKEAIAF
>Mature_766_residues
PQKSRFKLKISHSLLPKFPKMKKSNPNSFVQLDSAWSEPTTSFQQFSTQTTEQILAFLHIFINALNTATSKAQVDSLMRE
LYGLKRDDIILIQSHQEGEKILMDIISLIREKIYNFLSQGHICGVEYFNILLFVDSLAKTRFEVDTRFAIFNKMAEESLF
ANGISDVENLLLIELYILSKALSTMHNFEDIICEYISLVILIDINIPSSLEHTSFIVERFEALGVDMRLLLSALQIQLEP
QTYFAHSTIRKRSILNWQLHCFWNVSHFFNHHLWLELYPLWKEIFYVLLKKGDIESIDEAMYMQFFIYHFCGNNFHHQEQ
WRRFCDEIDRVSVQYYEEFAKNQGIYGVSKKQQSDKIRIGILRDRLVANSPYKVEYSLLSNLMRDEAFLQKYEIKVYTMN
LIEKSANDERIVRSYEEIGISVVDVVSPFNAKGFYNSHFQKALALKEAFHRDNISILISPNNGYGISDFLLASRSAPLQI
YYSHGNFVYDLSCIDVKMTHICQNKPRIVHEGYEFYGVPVKMQERFYNPPLTLESKQQIDSIRLKFPQDAVILGSIGRLV
KLQSREYWRCVIEIMLCFPKSIYLACGGGNSSLIRECIMDCFADKAKGEIFLERIYFTGYIDSTIYGHIIDIWFDSFPLE
QGESRIEYVAKGGLSLVMSKQSKEERTQHLEKWIAQWATLPHRDGSLKGKEECEKTHTILIESHLPLIAFSEEDYIQKGK
ALVELFTKKQTQKIASLRAVIAYGRAASDEFREIKGVQAFKEAIAF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 89116; Mature: 88985

Theoretical pI: Translated: 6.95; Mature: 6.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQKSRFKLKISHSLLPKFPKMKKSNPNSFVQLDSAWSEPTTSFQQFSTQTTEQILAFLH
CCCCCCEEEEECHHHCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHH
IFINALNTATSKAQVDSLMRELYGLKRDDIILIQSHQEGEKILMDIISLIREKIYNFLSQ
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHC
GHICGVEYFNILLFVDSLAKTRFEVDTRFAIFNKMAEESLFANGISDVENLLLIELYILS
CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
KALSTMHNFEDIICEYISLVILIDINIPSSLEHTSFIVERFEALGVDMRLLLSALQIQLE
HHHHHHHHHHHHHHHHHHEEEEEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHEEEC
PQTYFAHSTIRKRSILNWQLHCFWNVSHFFNHHLWLELYPLWKEIFYVLLKKGDIESIDE
CHHHHHHHHHHHHHCCCEEEEEEEEHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHH
AMYMQFFIYHFCGNNFHHQEQWRRFCDEIDRVSVQYYEEFAKNQGIYGVSKKQQSDKIRI
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEE
GILRDRLVANSPYKVEYSLLSNLMRDEAFLQKYEIKVYTMNLIEKSANDERIVRSYEEIG
EEEHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHEEEEEEEHHHCCCCHHHHHHHHHHHC
ISVVDVVSPFNAKGFYNSHFQKALALKEAFHRDNISILISPNNGYGISDFLLASRSAPLQ
CEEEEHHCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHCCCCCEE
IYYSHGNFVYDLSCIDVKMTHICQNKPRIVHEGYEFYGVPVKMQERFYNPPLTLESKQQI
EEEECCCEEEEEEEEHHHHHHHHCCCCCEEECCCEEECCCEEHHHHCCCCCCCCCCHHHH
DSIRLKFPQDAVILGSIGRLVKLQSREYWRCVIEIMLCFPKSIYLACGGGNSSLIRECIM
HHHEEECCCCEEEHHCHHHHHHHCCHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHH
DCFADKAKGEIFLERIYFTGYIDSTIYGHIIDIWFDSFPLEQGESRIEYVAKGGLSLVMS
HHHCCCCCCCEEEEEEEEEEEECCHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHEEEC
KQSKEERTQHLEKWIAQWATLPHRDGSLKGKEECEKTHTILIESHLPLIAFSEEDYIQKG
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHEEEEECCCCEEEECCHHHHHHH
KALVELFTKKQTQKIASLRAVIAYGRAASDEFREIKGVQAFKEAIAF
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PQKSRFKLKISHSLLPKFPKMKKSNPNSFVQLDSAWSEPTTSFQQFSTQTTEQILAFLH
CCCCCEEEEECHHHCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHH
IFINALNTATSKAQVDSLMRELYGLKRDDIILIQSHQEGEKILMDIISLIREKIYNFLSQ
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHC
GHICGVEYFNILLFVDSLAKTRFEVDTRFAIFNKMAEESLFANGISDVENLLLIELYILS
CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
KALSTMHNFEDIICEYISLVILIDINIPSSLEHTSFIVERFEALGVDMRLLLSALQIQLE
HHHHHHHHHHHHHHHHHHEEEEEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHEEEC
PQTYFAHSTIRKRSILNWQLHCFWNVSHFFNHHLWLELYPLWKEIFYVLLKKGDIESIDE
CHHHHHHHHHHHHHCCCEEEEEEEEHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHH
AMYMQFFIYHFCGNNFHHQEQWRRFCDEIDRVSVQYYEEFAKNQGIYGVSKKQQSDKIRI
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEE
GILRDRLVANSPYKVEYSLLSNLMRDEAFLQKYEIKVYTMNLIEKSANDERIVRSYEEIG
EEEHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHEEEEEEEHHHCCCCHHHHHHHHHHHC
ISVVDVVSPFNAKGFYNSHFQKALALKEAFHRDNISILISPNNGYGISDFLLASRSAPLQ
CEEEEHHCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHCCCCCEE
IYYSHGNFVYDLSCIDVKMTHICQNKPRIVHEGYEFYGVPVKMQERFYNPPLTLESKQQI
EEEECCCEEEEEEEEHHHHHHHHCCCCCEEECCCEEECCCEEHHHHCCCCCCCCCCHHHH
DSIRLKFPQDAVILGSIGRLVKLQSREYWRCVIEIMLCFPKSIYLACGGGNSSLIRECIM
HHHEEECCCCEEEHHCHHHHHHHCCHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHH
DCFADKAKGEIFLERIYFTGYIDSTIYGHIIDIWFDSFPLEQGESRIEYVAKGGLSLVMS
HHHCCCCCCCEEEEEEEEEEEECCHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHEEEC
KQSKEERTQHLEKWIAQWATLPHRDGSLKGKEECEKTHTILIESHLPLIAFSEEDYIQKG
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHEEEEECCCCEEEECCHHHHHHH
KALVELFTKKQTQKIASLRAVIAYGRAASDEFREIKGVQAFKEAIAF
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA