| Definition | Helicobacter hepaticus ATCC 51449 chromosome, complete genome. |
|---|---|
| Accession | NC_004917 |
| Length | 1,799,146 |
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The map label for this gene is 32266679
Identifier: 32266679
GI number: 32266679
Start: 1145332
End: 1146438
Strand: Direct
Name: 32266679
Synonym: HH1180
Alternate gene names: NA
Gene position: 1145332-1146438 (Clockwise)
Preceding gene: 32266678
Following gene: 32266680
Centisome position: 63.66
GC content: 33.97
Gene sequence:
>1107_bases GTGCATATATGTTGCTCAGTAGATAGTCATTATTTTCTTAGTGAGATTCAAAAAATTTATCCTGATACAACGATGATAGG GTATTTTTACAATCCAAATATTCACCCAAAAAGCGAATATGATTTGCGGCTTCTTGATGTCAGGCGAAGTTGTAAAATGT TAGGAGTAGAGCTTATAGAAGAAGAATATGAAAGTCAAGAATGGTTTGAAAGTGTTAGAGGACTTGAAGAAGAGCCAGAA AAAGGAGAGCGATGTGTAAAATGTTTTGATATGCGATTAGAAAAAACTGCACAAATGGCGCATACAATGTCAATAGAATC TTTTACCTCAACTTTACTTTCTAGCCCTCTCAAAGAGCAGCAGATTCTTTTTACTCAAGGTAACCAAATCGCGCAACATT ATGGCTTGTGTTTTATCAAGGTTGATGTGAGGAGCAATGGAGGTACGCAAGCACAAAGTGAATTAGCAAATAAGGATAGG CTTTATAAACAAACATATTGTGGGTGCCAATTTGCTTTAAGTAAGCAAAGAGAATCTCAAGGGCAACTTCCTCTTGAATT GATGAGCAATATTGGGAAGCAAATTTTACCTGCGAGTAATGAGCAGCGCAAAGCTGTTTTTGATTTACGGGATAAATGTG AGAAAGAAGGAAGGGAGTATGCGCTTTATAAACAATCAAAAATTATTTGGCGTAATTTACGAAGTATATGTATTGATGAA GGGAAAGTAATAAGTTCGTATGTTATTACACATTCACGTAGTAAGAATATGATAAAGACTTCAAATATTACCTATATCAA GCGCTCTGTATATGATAAAGATTATAGACTTCAATGTGTTGAGGTGGGCTATGCTAAACGTGATGAAAGTATATTTTTAA GCATAGATGATGCAAATATTTTATTAAAAACGCAGTATGCAAATGTGCAAGAAATGGTGTATAATGCGCCTTGTTATGAA TATGAAATAGCATTGCGCACGGCATTGTGTGGTGCAGATAGTATCAATCCTATTATTATCCTTGATAAAAAAATCAAACA TAGTCTAAAAGTTTTTATTAATGCACATTTTCAAGAAAGTAGTATTTTTGCTATCACTCCATATTAA
Upstream 100 bases:
>100_bases TTGGCAGCGGTTGTAGTCATAGGTATCGTTTCTTTTTGGTATTTTGCGGACAATAAAAATGAGTGAAAGCATACATATAG AAAAAAAGAAAAATATGCTT
Downstream 100 bases:
>100_bases AATTTTTTGGTAGAATATCACATTTGTTATAAGGAGTAAGAGAATGGATACAAATAAGATACAAGGGGATAAACCCATAA TGAATGTGGAGAAAATTCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 368; Mature: 368
Protein sequence:
>368_residues MHICCSVDSHYFLSEIQKIYPDTTMIGYFYNPNIHPKSEYDLRLLDVRRSCKMLGVELIEEEYESQEWFESVRGLEEEPE KGERCVKCFDMRLEKTAQMAHTMSIESFTSTLLSSPLKEQQILFTQGNQIAQHYGLCFIKVDVRSNGGTQAQSELANKDR LYKQTYCGCQFALSKQRESQGQLPLELMSNIGKQILPASNEQRKAVFDLRDKCEKEGREYALYKQSKIIWRNLRSICIDE GKVISSYVITHSRSKNMIKTSNITYIKRSVYDKDYRLQCVEVGYAKRDESIFLSIDDANILLKTQYANVQEMVYNAPCYE YEIALRTALCGADSINPIIILDKKIKHSLKVFINAHFQESSIFAITPY
Sequences:
>Translated_368_residues MHICCSVDSHYFLSEIQKIYPDTTMIGYFYNPNIHPKSEYDLRLLDVRRSCKMLGVELIEEEYESQEWFESVRGLEEEPE KGERCVKCFDMRLEKTAQMAHTMSIESFTSTLLSSPLKEQQILFTQGNQIAQHYGLCFIKVDVRSNGGTQAQSELANKDR LYKQTYCGCQFALSKQRESQGQLPLELMSNIGKQILPASNEQRKAVFDLRDKCEKEGREYALYKQSKIIWRNLRSICIDE GKVISSYVITHSRSKNMIKTSNITYIKRSVYDKDYRLQCVEVGYAKRDESIFLSIDDANILLKTQYANVQEMVYNAPCYE YEIALRTALCGADSINPIIILDKKIKHSLKVFINAHFQESSIFAITPY >Mature_368_residues MHICCSVDSHYFLSEIQKIYPDTTMIGYFYNPNIHPKSEYDLRLLDVRRSCKMLGVELIEEEYESQEWFESVRGLEEEPE KGERCVKCFDMRLEKTAQMAHTMSIESFTSTLLSSPLKEQQILFTQGNQIAQHYGLCFIKVDVRSNGGTQAQSELANKDR LYKQTYCGCQFALSKQRESQGQLPLELMSNIGKQILPASNEQRKAVFDLRDKCEKEGREYALYKQSKIIWRNLRSICIDE GKVISSYVITHSRSKNMIKTSNITYIKRSVYDKDYRLQCVEVGYAKRDESIFLSIDDANILLKTQYANVQEMVYNAPCYE YEIALRTALCGADSINPIIILDKKIKHSLKVFINAHFQESSIFAITPY
Specific function: Unknown
COG id: COG1636
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003828 [H]
Pfam domain/function: PF02677 DUF208 [H]
EC number: NA
Molecular weight: Translated: 42633; Mature: 42633
Theoretical pI: Translated: 7.12; Mature: 7.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHICCSVDSHYFLSEIQKIYPDTTMIGYFYNPNIHPKSEYDLRLLDVRRSCKMLGVELIE CEEEEECCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCEEHHHHHHHHHHHHHHHHH EEYESQEWFESVRGLEEEPEKGERCVKCFDMRLEKTAQMAHTMSIESFTSTLLSSPLKEQ HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC QILFTQGNQIAQHYGLCFIKVDVRSNGGTQAQSELANKDRLYKQTYCGCQFALSKQRESQ EEEEECCCHHHHHHCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCC GQLPLELMSNIGKQILPASNEQRKAVFDLRDKCEKEGREYALYKQSKIIWRNLRSICIDE CCCCHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHCCC GKVISSYVITHSRSKNMIKTSNITYIKRSVYDKDYRLQCVEVGYAKRDESIFLSIDDANI CCEEEHHHEEECCCCCCEEECCCCEEEHHHCCCCCEEEEEEECCCCCCCEEEEEECCCEE LLKTQYANVQEMVYNAPCYEYEIALRTALCGADSINPIIILDKKIKHSLKVFINAHFQES EEEEECCCHHHHHHCCCCEEEHHHHHHHHCCCCCCCEEEEECHHHHCCEEEEEEEEECCC SIFAITPY EEEEEECC >Mature Secondary Structure MHICCSVDSHYFLSEIQKIYPDTTMIGYFYNPNIHPKSEYDLRLLDVRRSCKMLGVELIE CEEEEECCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCEEHHHHHHHHHHHHHHHHH EEYESQEWFESVRGLEEEPEKGERCVKCFDMRLEKTAQMAHTMSIESFTSTLLSSPLKEQ HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC QILFTQGNQIAQHYGLCFIKVDVRSNGGTQAQSELANKDRLYKQTYCGCQFALSKQRESQ EEEEECCCHHHHHHCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCC GQLPLELMSNIGKQILPASNEQRKAVFDLRDKCEKEGREYALYKQSKIIWRNLRSICIDE CCCCHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHCCC GKVISSYVITHSRSKNMIKTSNITYIKRSVYDKDYRLQCVEVGYAKRDESIFLSIDDANI CCEEEHHHEEECCCCCCEEECCCCEEEHHHCCCCCEEEEEEECCCCCCCEEEEEECCCEE LLKTQYANVQEMVYNAPCYEYEIALRTALCGADSINPIIILDKKIKHSLKVFINAHFQES EEEEECCCHHHHHHCCCCEEEHHHHHHHHCCCCCCCEEEEECHHHHCCEEEEEEEEECCC SIFAITPY EEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800; 10675023 [H]