| Definition | Helicobacter hepaticus ATCC 51449 chromosome, complete genome. |
|---|---|
| Accession | NC_004917 |
| Length | 1,799,146 |
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The map label for this gene is 32266605
Identifier: 32266605
GI number: 32266605
Start: 1077025
End: 1078869
Strand: Direct
Name: 32266605
Synonym: HH1106
Alternate gene names: NA
Gene position: 1077025-1078869 (Clockwise)
Preceding gene: 32266604
Following gene: 32266606
Centisome position: 59.86
GC content: 36.04
Gene sequence:
>1845_bases GTGCAAGAAACAATAATGGAACAAATAAGTGAAAATCTGCTAGAAAACTTTATTAACGAATATATCAGCGCAAAAAATCA GCTTTTGCAAGGAGGGAATCCTCTCTATGCTCTCATTGATAAAGCCCATTATGCGCTCAGTCAAATTGCCCCGCTAGATT CTCGTGCTACGCATACATTACAATCTCTCACTCAAAGCATTCAAGAACCAATGAAAGTGGCTATTATCGGGCAATTTAGT AGCGGAAAATCCACGTTTTTAAATGCACTTTTGGGCAAAAATATCCTGCCTAGTGGTATCACTCCCATAACTGCAAAAAT ATGCCATATTGTCTATGGACAAGATTATGCACTTGAGATTCACTACAAAAATGGCAATACTGCCACAAAAACACTCTCAT ACCTCAACGAAGTAAGTGAAGTCCAAAATGCCAAAATCGCCTTTTACAAGCTTTATGCGCCATTAGAACTCCTTAAAAAA ATAAGTTTTCTTGATACACCCGGCTTTAACTCGCAAAATCAAAGCGATACAGATACTACAAATTCTATATTAGAAAGCGT TGATGGCATCATTTGGCTCACCCTCATTGATAATGTTGGCAAACACAGCGAAAAAGAAATTATCCTCTCCCACATTAAAC GTTACGCAAGCAAAAGCCTCTGTGTCCTCAATCAAAAAGATAGGCTTAAAAATCAAGAGGAAATCAACATAAGCCTTGAA TATGCTAAGAAAGCATTCAATGGACTTTTTGAGGAAATTATTGCCATATCTGCTAAAAATGCACTGCTTTCTTATGATGC TCCAAAAGAGCAAAGTGAGCATATGAGAGCAGATTCTCACATAGATTTTGTGCTTGATTTTCTCCATACACACATTGCTC CATTAGCTCAAGAATCTAAAAAACGCACGATTATTACGCAACTGCGCACTCTCGTACTTAGATATGCTCGTTTAAGTTTT CACGCGCATTTACGCTTTACTAAGTGTGAGACACTCCTTGCAGATTCTACTAAGTACTTCACAGAGCAATACCCTCAAAG TGCATTTTACAAATCATTCCCTACACTTTTTCATACTTTAGAATCCCAACTTGAATCACTTACTCAACACATTTACAACG CACTTGAAAAAACTCCCAAAGAGTTTGTGCGTGCTGATAAAAAATTTGGTATAAAAACACAAAATATACAAATAAAAGAC ATCACAACACTTCCTAGAGAGCGATTAAATCTTAGTTTATGCAATACAGATTCTACATTTGCAAGGCAATTTACCAAACT TGGTTTTGATATAACTGCCATAGGAGAACAATTTAATGCTCTGCTAAACGCACATATAGGGCATTTGAATGACAATATCA TACAATGGTATGAAACATTTATTCCTACTTTGCAAAACTCACTTTTGCAAAAAACACTTAATGAGATAATGGGAACATAT GATAACCTTATGCGTGAGCATTGTGAGAATCTTAACGCCCAATTAATGCTCGTTGCAAAAATCTTAACACTCAATTACCC ACTAGCAATAAATCTTTGCCTCAATACAATAAGTTTAAAAATCCAAGAAGCCTTAGAAAAATACACCAAAACACCAGATA CTTTGCCACTTTTTAATCCCACGCTTGAAAATATCCGCGATGAGCTCAATCTTGGCTTTCACTTCAACCTTTTACAAGAA AATCTTTTAACGCAACCACTGCATAAAAAAGCGTTGTGGCATTTTGAGCGAGAGGAAAAAGCACTTTGTGAGAAGCAATC TGCAATTATTGCAACTTATAAAGAGCAATACGCTCATCATTTTAAACAGCTTAAATCTTTGCTTCAAGCACTTAAAGATG TTTAA
Upstream 100 bases:
>100_bases AGCACTTAAAGATGCTCTTTACACCAAGCGAGAACAGCTTACAGGTATTATAAATGAACTTATGCAAGGTTTGCATAGTT TGCAATAATGAGATGAAAGG
Downstream 100 bases:
>100_bases GATTAAATGAAAAAGATAATTTTTACTTTTCTCTGCACTCTCTCATTGTGCTGTTGTGATAGCCCACAACAAGCCTTCGA GCTTTTGCTCAATTATTCAA
Product: hypothetical protein
Products: NA
Alternate protein names: ORF6 [H]
Number of amino acids: Translated: 614; Mature: 614
Protein sequence:
>614_residues MQETIMEQISENLLENFINEYISAKNQLLQGGNPLYALIDKAHYALSQIAPLDSRATHTLQSLTQSIQEPMKVAIIGQFS SGKSTFLNALLGKNILPSGITPITAKICHIVYGQDYALEIHYKNGNTATKTLSYLNEVSEVQNAKIAFYKLYAPLELLKK ISFLDTPGFNSQNQSDTDTTNSILESVDGIIWLTLIDNVGKHSEKEIILSHIKRYASKSLCVLNQKDRLKNQEEINISLE YAKKAFNGLFEEIIAISAKNALLSYDAPKEQSEHMRADSHIDFVLDFLHTHIAPLAQESKKRTIITQLRTLVLRYARLSF HAHLRFTKCETLLADSTKYFTEQYPQSAFYKSFPTLFHTLESQLESLTQHIYNALEKTPKEFVRADKKFGIKTQNIQIKD ITTLPRERLNLSLCNTDSTFARQFTKLGFDITAIGEQFNALLNAHIGHLNDNIIQWYETFIPTLQNSLLQKTLNEIMGTY DNLMREHCENLNAQLMLVAKILTLNYPLAINLCLNTISLKIQEALEKYTKTPDTLPLFNPTLENIRDELNLGFHFNLLQE NLLTQPLHKKALWHFEREEKALCEKQSAIIATYKEQYAHHFKQLKSLLQALKDV
Sequences:
>Translated_614_residues MQETIMEQISENLLENFINEYISAKNQLLQGGNPLYALIDKAHYALSQIAPLDSRATHTLQSLTQSIQEPMKVAIIGQFS SGKSTFLNALLGKNILPSGITPITAKICHIVYGQDYALEIHYKNGNTATKTLSYLNEVSEVQNAKIAFYKLYAPLELLKK ISFLDTPGFNSQNQSDTDTTNSILESVDGIIWLTLIDNVGKHSEKEIILSHIKRYASKSLCVLNQKDRLKNQEEINISLE YAKKAFNGLFEEIIAISAKNALLSYDAPKEQSEHMRADSHIDFVLDFLHTHIAPLAQESKKRTIITQLRTLVLRYARLSF HAHLRFTKCETLLADSTKYFTEQYPQSAFYKSFPTLFHTLESQLESLTQHIYNALEKTPKEFVRADKKFGIKTQNIQIKD ITTLPRERLNLSLCNTDSTFARQFTKLGFDITAIGEQFNALLNAHIGHLNDNIIQWYETFIPTLQNSLLQKTLNEIMGTY DNLMREHCENLNAQLMLVAKILTLNYPLAINLCLNTISLKIQEALEKYTKTPDTLPLFNPTLENIRDELNLGFHFNLLQE NLLTQPLHKKALWHFEREEKALCEKQSAIIATYKEQYAHHFKQLKSLLQALKDV >Mature_614_residues MQETIMEQISENLLENFINEYISAKNQLLQGGNPLYALIDKAHYALSQIAPLDSRATHTLQSLTQSIQEPMKVAIIGQFS SGKSTFLNALLGKNILPSGITPITAKICHIVYGQDYALEIHYKNGNTATKTLSYLNEVSEVQNAKIAFYKLYAPLELLKK ISFLDTPGFNSQNQSDTDTTNSILESVDGIIWLTLIDNVGKHSEKEIILSHIKRYASKSLCVLNQKDRLKNQEEINISLE YAKKAFNGLFEEIIAISAKNALLSYDAPKEQSEHMRADSHIDFVLDFLHTHIAPLAQESKKRTIITQLRTLVLRYARLSF HAHLRFTKCETLLADSTKYFTEQYPQSAFYKSFPTLFHTLESQLESLTQHIYNALEKTPKEFVRADKKFGIKTQNIQIKD ITTLPRERLNLSLCNTDSTFARQFTKLGFDITAIGEQFNALLNAHIGHLNDNIIQWYETFIPTLQNSLLQKTLNEIMGTY DNLMREHCENLNAQLMLVAKILTLNYPLAINLCLNTISLKIQEALEKYTKTPDTLPLFNPTLENIRDELNLGFHFNLLQE NLLTQPLHKKALWHFEREEKALCEKQSAIIATYKEQYAHHFKQLKSLLQALKDV
Specific function: Unknown
COG id: COG0699
COG function: function code R; Predicted GTPases (dynamin-related)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.genitalium MG148 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001401 [H]
Pfam domain/function: PF00350 Dynamin_N [H]
EC number: NA
Molecular weight: Translated: 70215; Mature: 70215
Theoretical pI: Translated: 7.24; Mature: 7.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQETIMEQISENLLENFINEYISAKNQLLQGGNPLYALIDKAHYALSQIAPLDSRATHTL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHH QSLTQSIQEPMKVAIIGQFSSGKSTFLNALLGKNILPSGITPITAKICHIVYGQDYALEI HHHHHHHHCCCEEEEEEECCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEEEE HYKNGNTATKTLSYLNEVSEVQNAKIAFYKLYAPLELLKKISFLDTPGFNSQNQSDTDTT EECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH NSILESVDGIIWLTLIDNVGKHSEKEIILSHIKRYASKSLCVLNQKDRLKNQEEINISLE HHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEECCHHHCCCCHHEEEHHH YAKKAFNGLFEEIIAISAKNALLSYDAPKEQSEHMRADSHIDFVLDFLHTHIAPLAQESK HHHHHHHHHHHHHHHHHHCCHHEECCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH KRTIITQLRTLVLRYARLSFHAHLRFTKCETLLADSTKYFTEQYPQSAFYKSFPTLFHTL HHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHH ESQLESLTQHIYNALEKTPKEFVRADKKFGIKTQNIQIKDITTLPRERLNLSLCNTDSTF HHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCEECCEEEEECHHCCHHHCCEEEECCCHHH ARQFTKLGFDITAIGEQFNALLNAHIGHLNDNIIQWYETFIPTLQNSLLQKTLNEIMGTY HHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DNLMREHCENLNAQLMLVAKILTLNYPLAINLCLNTISLKIQEALEKYTKTPDTLPLFNP HHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC TLENIRDELNLGFHFNLLQENLLTQPLHKKALWHFEREEKALCEKQSAIIATYKEQYAHH HHHHHHHHHCCCEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FKQLKSLLQALKDV HHHHHHHHHHHHCC >Mature Secondary Structure MQETIMEQISENLLENFINEYISAKNQLLQGGNPLYALIDKAHYALSQIAPLDSRATHTL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHH QSLTQSIQEPMKVAIIGQFSSGKSTFLNALLGKNILPSGITPITAKICHIVYGQDYALEI HHHHHHHHCCCEEEEEEECCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEEEE HYKNGNTATKTLSYLNEVSEVQNAKIAFYKLYAPLELLKKISFLDTPGFNSQNQSDTDTT EECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH NSILESVDGIIWLTLIDNVGKHSEKEIILSHIKRYASKSLCVLNQKDRLKNQEEINISLE HHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEECCHHHCCCCHHEEEHHH YAKKAFNGLFEEIIAISAKNALLSYDAPKEQSEHMRADSHIDFVLDFLHTHIAPLAQESK HHHHHHHHHHHHHHHHHHCCHHEECCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH KRTIITQLRTLVLRYARLSFHAHLRFTKCETLLADSTKYFTEQYPQSAFYKSFPTLFHTL HHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHH ESQLESLTQHIYNALEKTPKEFVRADKKFGIKTQNIQIKDITTLPRERLNLSLCNTDSTF HHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCEECCEEEEECHHCCHHHCCEEEECCCHHH ARQFTKLGFDITAIGEQFNALLNAHIGHLNDNIIQWYETFIPTLQNSLLQKTLNEIMGTY HHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DNLMREHCENLNAQLMLVAKILTLNYPLAINLCLNTISLKIQEALEKYTKTPDTLPLFNP HHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC TLENIRDELNLGFHFNLLQENLLTQPLHKKALWHFEREEKALCEKQSAIIATYKEQYAHH HHHHHHHHHCCCEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FKQLKSLLQALKDV HHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8920183 [H]