| Definition | Helicobacter hepaticus ATCC 51449 chromosome, complete genome. |
|---|---|
| Accession | NC_004917 |
| Length | 1,799,146 |
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The map label for this gene is maeB [H]
Identifier: 32266593
GI number: 32266593
Start: 1064330
End: 1065544
Strand: Direct
Name: maeB [H]
Synonym: HH1094
Alternate gene names: 32266593
Gene position: 1064330-1065544 (Clockwise)
Preceding gene: 32266592
Following gene: 32266598
Centisome position: 59.16
GC content: 40.82
Gene sequence:
>1215_bases ATGGATTTACAAACTCTTAAAAAAGCCTATCCCAAAGCTCTACCTTACCACATTGGCGGCAAAGTTGGTATTCAGCCTCG CAAAAGATTACGCTCTATTGATGAACTAGGATTAGCCTATACACCCGGCGTCGCTGTGCCTTGTAAGCAGATTGAGGCTA ATCCTTTAAGCGCATATGATTACACTTCAAAAAGCAATCTTGTTGCAGTTATTAGCAACGGCACAGCAGTGCTTGGACTC GGCGATATTGGAGCTATGGCAAGTAAGCCCGTTATGGAGGGAAAAGCCATTTTGTTTAAAACTTTCGCAGGAGTTGATGC CTTTGATATTGAGATTAACGAAAAAGATGTGGATAAATTTGTCGCTGTAGTTAAGGCGATTTCGCCCACATTTGGTGGCA TTAACCTAGAAGATATTAAAGCTCCGGAATGCTTTGAGATTGAGCGAAGACTCATTGAAGAGCTTGATATTCCTGTAATG CACGATGACCAACACGGCACAGCAATTATCTCTACTGCAGGAATTATCAACGCCTTGCACCTTGTAAATAAAAAAGCAAA GGATATTAAGGTTGTCGTATTTGGTGCGGGAGCTGCAGCTGTGGCGTGTGCAAAAATGTATAAAGCATTTGGCGTGAAAA ATCTTGTAATGTTTGATTCTAAAGGTGCAATTAGTGCAAATAGAACCGATTTAAATGATTTGAAAAAAGAGTTTATCTGC CAAGAGAACTATGCCTCATATAAAGACGCGCTTAATGGCGCAGATGTAATGCTTGGGCTATCAAAGGGCAATTTATTAAG CGGAGATGATATTAAGGGAATGAATGAATCTCCCCTCATTTTCGCACTAAGTAATCCTACGCCAGAAATTATGCCCGATG AGGTGAAAAAAGCACGTCCTGATGCAATAGTTGCCACAGGACGCAGTGATTTCCCCAATCAAATTAATAATGTGCTTGGA TTTCCCTACATCTTTAAAGGTGCGCTTAAAGTGCGTGCGAGCAAAATTAACGAAGAAATGAAATTTGCCGCAGCTTATGC AATCGCTAATCTTGCACGTGAACCAATCACCGAAAAACTTGAAAAACTTTTAAAGAAAAAAATGAGTTTTGGCAAAGAAT ATATTATCCCCTCTGCCTTTGATGAAAGACTTGATGATGTCGTCTCAAATGCCGTAGCAGATGCAGCGATAAAAAGCGGC GTGGCAAGGGTGTAA
Upstream 100 bases:
>100_bases ATTTGGGGGCGTAGAATAATATCTTTATGTTTTATTTGCAAAAAAGTGCTAAAACTTCGCTGTATATAACCATATCTTCT ATAAAAATTAAGGATATATA
Downstream 100 bases:
>100_bases AGCAAAAAACGAACTATTTTATATCGGGTTTTTGTGGAGCTTCCCATTTTCACAGGCTCAAATTGTTTGATACGCTCCAC AGGATAATTATAGTGAAGTA
Product: malate oxidoreductase
Products: NA
Alternate protein names: NADP-ME [H]
Number of amino acids: Translated: 404; Mature: 404
Protein sequence:
>404_residues MDLQTLKKAYPKALPYHIGGKVGIQPRKRLRSIDELGLAYTPGVAVPCKQIEANPLSAYDYTSKSNLVAVISNGTAVLGL GDIGAMASKPVMEGKAILFKTFAGVDAFDIEINEKDVDKFVAVVKAISPTFGGINLEDIKAPECFEIERRLIEELDIPVM HDDQHGTAIISTAGIINALHLVNKKAKDIKVVVFGAGAAAVACAKMYKAFGVKNLVMFDSKGAISANRTDLNDLKKEFIC QENYASYKDALNGADVMLGLSKGNLLSGDDIKGMNESPLIFALSNPTPEIMPDEVKKARPDAIVATGRSDFPNQINNVLG FPYIFKGALKVRASKINEEMKFAAAYAIANLAREPITEKLEKLLKKKMSFGKEYIIPSAFDERLDDVVSNAVADAAIKSG VARV
Sequences:
>Translated_404_residues MDLQTLKKAYPKALPYHIGGKVGIQPRKRLRSIDELGLAYTPGVAVPCKQIEANPLSAYDYTSKSNLVAVISNGTAVLGL GDIGAMASKPVMEGKAILFKTFAGVDAFDIEINEKDVDKFVAVVKAISPTFGGINLEDIKAPECFEIERRLIEELDIPVM HDDQHGTAIISTAGIINALHLVNKKAKDIKVVVFGAGAAAVACAKMYKAFGVKNLVMFDSKGAISANRTDLNDLKKEFIC QENYASYKDALNGADVMLGLSKGNLLSGDDIKGMNESPLIFALSNPTPEIMPDEVKKARPDAIVATGRSDFPNQINNVLG FPYIFKGALKVRASKINEEMKFAAAYAIANLAREPITEKLEKLLKKKMSFGKEYIIPSAFDERLDDVVSNAVADAAIKSG VARV >Mature_404_residues MDLQTLKKAYPKALPYHIGGKVGIQPRKRLRSIDELGLAYTPGVAVPCKQIEANPLSAYDYTSKSNLVAVISNGTAVLGL GDIGAMASKPVMEGKAILFKTFAGVDAFDIEINEKDVDKFVAVVKAISPTFGGINLEDIKAPECFEIERRLIEELDIPVM HDDQHGTAIISTAGIINALHLVNKKAKDIKVVVFGAGAAAVACAKMYKAFGVKNLVMFDSKGAISANRTDLNDLKKEFIC QENYASYKDALNGADVMLGLSKGNLLSGDDIKGMNESPLIFALSNPTPEIMPDEVKKARPDAIVATGRSDFPNQINNVLG FPYIFKGALKVRASKINEEMKFAAAYAIANLAREPITEKLEKLLKKKMSFGKEYIIPSAFDERLDDVVSNAVADAAIKSG VARV
Specific function: Unknown
COG id: COG0281
COG function: function code C; Malic enzyme
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the phosphate acetyltransferase and butyryltransferase family [H]
Homologues:
Organism=Homo sapiens, GI4505143, Length=397, Percent_Identity=24.9370277078086, Blast_Score=74, Evalue=2e-13, Organism=Escherichia coli, GI1788806, Length=398, Percent_Identity=54.7738693467337, Blast_Score=424, Evalue=1e-120, Organism=Saccharomyces cerevisiae, GI6322823, Length=277, Percent_Identity=29.6028880866426, Blast_Score=80, Evalue=8e-16, Organism=Drosophila melanogaster, GI78707242, Length=353, Percent_Identity=24.6458923512748, Blast_Score=79, Evalue=8e-15, Organism=Drosophila melanogaster, GI78707238, Length=353, Percent_Identity=24.6458923512748, Blast_Score=79, Evalue=8e-15, Organism=Drosophila melanogaster, GI78707240, Length=353, Percent_Identity=24.6458923512748, Blast_Score=78, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015884 - InterPro: IPR012301 - InterPro: IPR012302 - InterPro: IPR012188 - InterPro: IPR016040 - InterPro: IPR002505 [H]
Pfam domain/function: PF00390 malic; PF03949 Malic_M; PF01515 PTA_PTB [H]
EC number: =1.1.1.40 [H]
Molecular weight: Translated: 43614; Mature: 43614
Theoretical pI: Translated: 8.27; Mature: 8.27
Prosite motif: PS00331 MALIC_ENZYMES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLQTLKKAYPKALPYHIGGKVGIQPRKRLRSIDELGLAYTPGVAVPCKQIEANPLSAYD CCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEECCCCCCCHHHCCCCCCCCCC YTSKSNLVAVISNGTAVLGLGDIGAMASKPVMEGKAILFKTFAGVDAFDIEINEKDVDKF CCCCCCEEEEEECCEEEEEECCHHHHHCCCCCCCCEEEEEHHCCCEEEEEEECHHHHHHH VAVVKAISPTFGGINLEDIKAPECFEIERRLIEELDIPVMHDDQHGTAIISTAGIINALH HHHHHHHCCCCCCCCHHHCCCCCHHHHHHHHHHHCCCCEEECCCCCCEEEEHHHHHHHHH LVNKKAKDIKVVVFGAGAAAVACAKMYKAFGVKNLVMFDSKGAISANRTDLNDLKKEFIC HHCCCCCCEEEEEEECCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHH QENYASYKDALNGADVMLGLSKGNLLSGDDIKGMNESPLIFALSNPTPEIMPDEVKKARP HCCHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHCCC DAIVATGRSDFPNQINNVLGFPYIFKGALKVRASKINEEMKFAAAYAIANLAREPITEKL CEEEECCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EKLLKKKMSFGKEYIIPSAFDERLDDVVSNAVADAAIKSGVARV HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MDLQTLKKAYPKALPYHIGGKVGIQPRKRLRSIDELGLAYTPGVAVPCKQIEANPLSAYD CCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEECCCCCCCHHHCCCCCCCCCC YTSKSNLVAVISNGTAVLGLGDIGAMASKPVMEGKAILFKTFAGVDAFDIEINEKDVDKF CCCCCCEEEEEECCEEEEEECCHHHHHCCCCCCCCEEEEEHHCCCEEEEEEECHHHHHHH VAVVKAISPTFGGINLEDIKAPECFEIERRLIEELDIPVMHDDQHGTAIISTAGIINALH HHHHHHHCCCCCCCCHHHCCCCCHHHHHHHHHHHCCCCEEECCCCCCEEEEHHHHHHHHH LVNKKAKDIKVVVFGAGAAAVACAKMYKAFGVKNLVMFDSKGAISANRTDLNDLKKEFIC HHCCCCCCEEEEEEECCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHH QENYASYKDALNGADVMLGLSKGNLLSGDDIKGMNESPLIFALSNPTPEIMPDEVKKARP HCCHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHCCC DAIVATGRSDFPNQINNVLGFPYIFKGALKVRASKINEEMKFAAAYAIANLAREPITEKL CEEEECCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EKLLKKKMSFGKEYIIPSAFDERLDDVVSNAVADAAIKSGVARV HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503; 36376 [H]