| Definition | Helicobacter hepaticus ATCC 51449 chromosome, complete genome. |
|---|---|
| Accession | NC_004917 |
| Length | 1,799,146 |
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The map label for this gene is vat [H]
Identifier: 32266545
GI number: 32266545
Start: 1024751
End: 1025416
Strand: Direct
Name: vat [H]
Synonym: HH1046
Alternate gene names: 32266545
Gene position: 1024751-1025416 (Clockwise)
Preceding gene: 32266544
Following gene: 32266546
Centisome position: 56.96
GC content: 43.09
Gene sequence:
>666_bases ATGAAACATAGAATCTTTCCCAATCCAAACAATCCCTTTCCAATTAAGGGCGTGGATTATGTCTGCTATGTCAAACCCAT CATAAAGAATCCAAATGTCATCGTGGGCGACTTTACATACATTAGTGATAGCGATTTTGAGCGGCATATCAGCCACCATT ACGCATTTAATGGAGACAAACTCATTATCGGCAAATTCTGTCAAATCGCTGCGGGTGTGGAGTTTGTGATGAACGGCGCA AATCATCAAATGAATGCAGTCAGCACTTTTCCCTTTAATATTTTTGAGGGTTGGAATGCGCCACCTCCAACGCCCGAAAA TCTGCCTCTTAAGGGCGATACGATGATTGGCAATGATGTATGGATTGGGCAAAATGCCACGATTTTGCCCGGTGTGCATA TCGGTGATGGCGCGATTATCGGCGCAAATGCTGTTGTGGGAAGCAATGTCGCACCTTATAGCATTGTGGTGGGGAATCCT GCAAAAGAAATCAAAAAGCGTTTTGATGAGGAGCTTATTGCGCTTTTACTTGCGTTTCAATGGTGGGAGAAAAGCATAGC AGAGATTCAAAGTCTAATCCCGCTGCTAACTTGCAGCGACTTACAAAGGGTAAAAGAGGAGATAAAGAAGAGGATAAGCA ACCAACAAAGCAATGATGAATTTTAA
Upstream 100 bases:
>100_bases AAATTGGCTATATCCATAAATCACAGATTGAAATAACACCTCATATAACAGACTTTTACTAATAAATCTGCCTTATAAGA TTTGACACAAGGAGACAAAT
Downstream 100 bases:
>100_bases CCATAGCCCTATTTGGCGCGCTGTGTTGTTAGATAGTAAAGAACAACTAAAAAGCTTAAAATTCAGCCACAATCACCGCG CCAAAGCCAAGAAGCACAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 221; Mature: 221
Protein sequence:
>221_residues MKHRIFPNPNNPFPIKGVDYVCYVKPIIKNPNVIVGDFTYISDSDFERHISHHYAFNGDKLIIGKFCQIAAGVEFVMNGA NHQMNAVSTFPFNIFEGWNAPPPTPENLPLKGDTMIGNDVWIGQNATILPGVHIGDGAIIGANAVVGSNVAPYSIVVGNP AKEIKKRFDEELIALLLAFQWWEKSIAEIQSLIPLLTCSDLQRVKEEIKKRISNQQSNDEF
Sequences:
>Translated_221_residues MKHRIFPNPNNPFPIKGVDYVCYVKPIIKNPNVIVGDFTYISDSDFERHISHHYAFNGDKLIIGKFCQIAAGVEFVMNGA NHQMNAVSTFPFNIFEGWNAPPPTPENLPLKGDTMIGNDVWIGQNATILPGVHIGDGAIIGANAVVGSNVAPYSIVVGNP AKEIKKRFDEELIALLLAFQWWEKSIAEIQSLIPLLTCSDLQRVKEEIKKRISNQQSNDEF >Mature_221_residues MKHRIFPNPNNPFPIKGVDYVCYVKPIIKNPNVIVGDFTYISDSDFERHISHHYAFNGDKLIIGKFCQIAAGVEFVMNGA NHQMNAVSTFPFNIFEGWNAPPPTPENLPLKGDTMIGNDVWIGQNATILPGVHIGDGAIIGANAVVGSNVAPYSIVVGNP AKEIKKRFDEELIALLLAFQWWEKSIAEIQSLIPLLTCSDLQRVKEEIKKRISNQQSNDEF
Specific function: Inactivates the A compounds of virginiamycin-like antibiotics, thus providing resistance to these antibiotics [H]
COG id: COG0110
COG function: function code R; Acetyltransferase (isoleucine patch superfamily)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transferase hexapeptide repeat family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001451 - InterPro: IPR018357 - InterPro: IPR011004 [H]
Pfam domain/function: PF00132 Hexapep [H]
EC number: 2.3.1.- [C]
Molecular weight: Translated: 24603; Mature: 24603
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: PS00101 HEXAPEP_TRANSFERASES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHRIFPNPNNPFPIKGVDYVCYVKPIIKNPNVIVGDFTYISDSDFERHISHHYAFNGDK CCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEEEEECCCCHHHHHHHHEECCCCE LIIGKFCQIAAGVEFVMNGANHQMNAVSTFPFNIFEGWNAPPPTPENLPLKGDTMIGNDV EEEHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHCCCCCCCCCCCCCCCCCCCEEECCEE WIGQNATILPGVHIGDGAIIGANAVVGSNVAPYSIVVGNPAKEIKKRFDEELIALLLAFQ EECCCCEECCCEEECCCEEEECCCEECCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHH WWEKSIAEIQSLIPLLTCSDLQRVKEEIKKRISNQQSNDEF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MKHRIFPNPNNPFPIKGVDYVCYVKPIIKNPNVIVGDFTYISDSDFERHISHHYAFNGDK CCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEEEEECCCCHHHHHHHHEECCCCE LIIGKFCQIAAGVEFVMNGANHQMNAVSTFPFNIFEGWNAPPPTPENLPLKGDTMIGNDV EEEHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHCCCCCCCCCCCCCCCCCCCEEECCEE WIGQNATILPGVHIGDGAIIGANAVVGSNVAPYSIVVGNPAKEIKKRFDEELIALLLAFQ EECCCCEECCCEEECCCEEEECCCEECCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHH WWEKSIAEIQSLIPLLTCSDLQRVKEEIKKRISNQQSNDEF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8344533; 3149758 [H]