Definition Helicobacter hepaticus ATCC 51449 chromosome, complete genome.
Accession NC_004917
Length 1,799,146

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The map label for this gene is 32266544

Identifier: 32266544

GI number: 32266544

Start: 1023447

End: 1024712

Strand: Direct

Name: 32266544

Synonym: HH1045

Alternate gene names: NA

Gene position: 1023447-1024712 (Clockwise)

Preceding gene: 32266540

Following gene: 32266545

Centisome position: 56.89

GC content: 32.62

Gene sequence:

>1266_bases
ATGAAAAAGATTCTTTGTTTTATTTGTTTGGTAACTTTTACTTTTGGCCTTGATTTTGACAAACTAGGGTTAAATGTAGA
ATTATTAAACAATAAGGATTATACGCAAGCAAAAGCTTTATTAAAAGGCTTGGAATCTCGTGCAAAGCAACGCGATTTGA
GTTTTGAGGATTATCAAAAATTAGAAGCATTAATGCTGTGTGAAATGTCACCTTTTGAGGATTGCGTAACACCGGGATTT
GTTACTAATGCAGCTTATTTCTTCACTAAATTTATGGCAAAAGAGTTTGGACATTTATTTGCAGAATATGGAATGGGCTC
GAATATGGGATATGAAAATTTTGAATATAAAAAAGAATATTATCTTTACGATGAGATTGTATTTTGGTTTCCAATAAACA
AAAATAGCCCTTCACAAAAAGAGGCGTATGAAAACTTCCTTTTTATGAAAAAGCATTTTAAAATAGCAACAGAAATAGAT
GATAATGGTAAGAGAAAAAAAATTTGTCACTATGTTACTGCAGAAAGCGGAGAGTGTAGGTTTGTCCCTAAAAAGCCTCT
TGTCTTGCGAGGAGTGCTAAAAGCTATACAAGATTTCCACTTGCAACCTGCAAGACTAGGGTCTTGTGATGATGGCTCTT
CTCCTTATATTGCCTTTGAACCACATAATAAGAATCTTGTTTTTGCATTTGGAGAAGTTGATTTAACATATAACCAAACT
TATTATAATCTTTTTGCACCTCTTTTGCCAGAGTGGTATAAAGAGGGACTTGGTGGGAGTGTGAACTTTGAAGTAGAGCT
AGAACTTGAAAGCGTAATGCCGTGGAAATTTTCTTGTGCTACCGGAAATTCGATACAGATTAAGAATATTAAGATTCTTA
AAAAGATTTCAGAAAATCCAAGCCAAAAGAAAGATTATGCAGATAACGAGTATTATAAAGTAACCCTTAATACTTCGGAT
AACTATGTGAATCTGCGCAATAAGCCAAATGGGAAAATTCTAGCGCAAATTTTTATAAAAGATAAAGAAAACATTAAACT
TATCAATCTCTCAAATATGCTTTGGAGTCTAAATAAAATAAGCGAGTGGCAAAGACAAATTGGCTATAAACAAAAACTAG
ATTTTCAAGATAGCCAAAAGCTTGGACAAGAATGGGTAAAAGTATTGTATTTCCCACCCAATGTGCAAAAGATTAAAGAT
GCAAAAATTGGCTATATCCATAAATCACAGATTGAAATAACACCTCATATAACAGACTTTTACTAA

Upstream 100 bases:

>100_bases
TTTAAAGAGAGAAGAGTAAAAGAATCTTCAAACAAAACCTAATAATCCCTTGATTCTTTTGATACAATGCCGCTTTAGAT
ATACGCAAAAAGGAGAAAAA

Downstream 100 bases:

>100_bases
TAAATCTGCCTTATAAGATTTGACACAAGGAGACAAATATGAAACATAGAATCTTTCCCAATCCAAACAATCCCTTTCCA
ATTAAGGGCGTGGATTATGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 421; Mature: 421

Protein sequence:

>421_residues
MKKILCFICLVTFTFGLDFDKLGLNVELLNNKDYTQAKALLKGLESRAKQRDLSFEDYQKLEALMLCEMSPFEDCVTPGF
VTNAAYFFTKFMAKEFGHLFAEYGMGSNMGYENFEYKKEYYLYDEIVFWFPINKNSPSQKEAYENFLFMKKHFKIATEID
DNGKRKKICHYVTAESGECRFVPKKPLVLRGVLKAIQDFHLQPARLGSCDDGSSPYIAFEPHNKNLVFAFGEVDLTYNQT
YYNLFAPLLPEWYKEGLGGSVNFEVELELESVMPWKFSCATGNSIQIKNIKILKKISENPSQKKDYADNEYYKVTLNTSD
NYVNLRNKPNGKILAQIFIKDKENIKLINLSNMLWSLNKISEWQRQIGYKQKLDFQDSQKLGQEWVKVLYFPPNVQKIKD
AKIGYIHKSQIEITPHITDFY

Sequences:

>Translated_421_residues
MKKILCFICLVTFTFGLDFDKLGLNVELLNNKDYTQAKALLKGLESRAKQRDLSFEDYQKLEALMLCEMSPFEDCVTPGF
VTNAAYFFTKFMAKEFGHLFAEYGMGSNMGYENFEYKKEYYLYDEIVFWFPINKNSPSQKEAYENFLFMKKHFKIATEID
DNGKRKKICHYVTAESGECRFVPKKPLVLRGVLKAIQDFHLQPARLGSCDDGSSPYIAFEPHNKNLVFAFGEVDLTYNQT
YYNLFAPLLPEWYKEGLGGSVNFEVELELESVMPWKFSCATGNSIQIKNIKILKKISENPSQKKDYADNEYYKVTLNTSD
NYVNLRNKPNGKILAQIFIKDKENIKLINLSNMLWSLNKISEWQRQIGYKQKLDFQDSQKLGQEWVKVLYFPPNVQKIKD
AKIGYIHKSQIEITPHITDFY
>Mature_421_residues
MKKILCFICLVTFTFGLDFDKLGLNVELLNNKDYTQAKALLKGLESRAKQRDLSFEDYQKLEALMLCEMSPFEDCVTPGF
VTNAAYFFTKFMAKEFGHLFAEYGMGSNMGYENFEYKKEYYLYDEIVFWFPINKNSPSQKEAYENFLFMKKHFKIATEID
DNGKRKKICHYVTAESGECRFVPKKPLVLRGVLKAIQDFHLQPARLGSCDDGSSPYIAFEPHNKNLVFAFGEVDLTYNQT
YYNLFAPLLPEWYKEGLGGSVNFEVELELESVMPWKFSCATGNSIQIKNIKILKKISENPSQKKDYADNEYYKVTLNTSD
NYVNLRNKPNGKILAQIFIKDKENIKLINLSNMLWSLNKISEWQRQIGYKQKLDFQDSQKLGQEWVKVLYFPPNVQKIKD
AKIGYIHKSQIEITPHITDFY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49080; Mature: 49080

Theoretical pI: Translated: 8.16; Mature: 8.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKILCFICLVTFTFGLDFDKLGLNVELLNNKDYTQAKALLKGLESRAKQRDLSFEDYQK
CCHHHHHHHHHHHHHCCCHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHH
LEALMLCEMSPFEDCVTPGFVTNAAYFFTKFMAKEFGHLFAEYGMGSNMGYENFEYKKEY
HHHHHHCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEE
YLYDEIVFWFPINKNSPSQKEAYENFLFMKKHFKIATEIDDNGKRKKICHYVTAESGECR
EEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHEEEEEEECCCCCCCEEEEEEECCCCCEE
FVPKKPLVLRGVLKAIQDFHLQPARLGSCDDGSSPYIAFEPHNKNLVFAFGEVDLTYNQT
ECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEEEEEEEECCH
YYNLFAPLLPEWYKEGLGGSVNFEVELELESVMPWKFSCATGNSIQIKNIKILKKISENP
HHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCEEEEECCCCEEEEEHHHHHHHHHCCC
SQKKDYADNEYYKVTLNTSDNYVNLRNKPNGKILAQIFIKDKENIKLINLSNMLWSLNKI
CCCCCCCCCCEEEEEEECCCCEEEECCCCCCCEEEEEEEECCCCEEEEEHHHHHHHHHHH
SEWQRQIGYKQKLDFQDSQKLGQEWVKVLYFPPNVQKIKDAKIGYIHKSQIEITPHITDF
HHHHHHCCCCCCCCCCHHHHHHHHHHEEEECCCCCHHHCCCCCCEEEECEEEEECCCCCC
Y
C
>Mature Secondary Structure
MKKILCFICLVTFTFGLDFDKLGLNVELLNNKDYTQAKALLKGLESRAKQRDLSFEDYQK
CCHHHHHHHHHHHHHCCCHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHH
LEALMLCEMSPFEDCVTPGFVTNAAYFFTKFMAKEFGHLFAEYGMGSNMGYENFEYKKEY
HHHHHHCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEE
YLYDEIVFWFPINKNSPSQKEAYENFLFMKKHFKIATEIDDNGKRKKICHYVTAESGECR
EEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHEEEEEEECCCCCCCEEEEEEECCCCCEE
FVPKKPLVLRGVLKAIQDFHLQPARLGSCDDGSSPYIAFEPHNKNLVFAFGEVDLTYNQT
ECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEEEEEEEECCH
YYNLFAPLLPEWYKEGLGGSVNFEVELELESVMPWKFSCATGNSIQIKNIKILKKISENP
HHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCEEEEECCCCEEEEEHHHHHHHHHCCC
SQKKDYADNEYYKVTLNTSDNYVNLRNKPNGKILAQIFIKDKENIKLINLSNMLWSLNKI
CCCCCCCCCCEEEEEEECCCCEEEECCCCCCCEEEEEEEECCCCEEEEEHHHHHHHHHHH
SEWQRQIGYKQKLDFQDSQKLGQEWVKVLYFPPNVQKIKDAKIGYIHKSQIEITPHITDF
HHHHHHCCCCCCCCCCHHHHHHHHHHEEEECCCCCHHHCCCCCCEEEECEEEEECCCCCC
Y
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA