| Definition | Helicobacter hepaticus ATCC 51449 chromosome, complete genome. |
|---|---|
| Accession | NC_004917 |
| Length | 1,799,146 |
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The map label for this gene is 32266539
Identifier: 32266539
GI number: 32266539
Start: 1019651
End: 1021045
Strand: Direct
Name: 32266539
Synonym: HH1040
Alternate gene names: NA
Gene position: 1019651-1021045 (Clockwise)
Preceding gene: 32266538
Following gene: 32266540
Centisome position: 56.67
GC content: 28.75
Gene sequence:
>1395_bases ATGGCATATTTTAATGAAAAAGCCTCCAAAATCAATCATCAATATATTATTGAGAATCCAAAGGTTAAAGATTATCTTGC AAAATGCGAAAAGATAGGACAAAATCTACCTTTGGAAGTTGATTCTCAAGCTATCACTTCACCAATATCTAACATACAAA ACAAATTTTCCTCTTGCATTGAACGCGTCATCACAATAGATGGTGGCTACCAAGAAGTAAATATCAATGATAATTTTCCC TCACAAAAACTTTGTTACTATAATATAGGTATTCTTATGTTTAGTGTTAAAGATTTAGAAGTAGTTGAAAGGCAACAAAC AATTAACCCAAGCGATATAGGCAAATTAGAGAATCTTGAACGATTTAGCTTTGTGATACCCACACAAAATATTCGTTTAA AAAATGAGGATTTTATCTCTACATTTAGAAAAACACTTTATGAAGAAGTTTTCCTCAAAAATTATTTAAGCGAGGGAAAT GAAAAGAGTTCATTTATCCATACAATTAAATGGCTCATTTTTAAAGAATATTTAGATTCAAATTCTAAAGGGAAAAGTTC TATAACATTTGCGTGTCCTCACTGCAAGAAAATGCAGACATTCCAAAAGCAAACCCCCAATTATTTAGATGAGCAAAATA ATTTTGTAAAATGTTCAGAATGTGAAAATATCATTTACATTACAGATTGTTTTGACTTACATACTCTCATTGATGAAATC AATGGAGCAACGCTTATAGAATCCTACATTATGAGTGCTTTTGAAATTATTTTAATGCTTTCAATGTTTCGATTCCTTTT TGAAGAAAACACTATACAATGGCTACCAAAGATTCTCTTTATCAAAGATGGTCCTTTGGCTTTATTTAGTCGTCTTGATG ATTTTGCTTTTAAAATTGTGCGTCCGTTTATACAATTTCTTTATGCAAAATCTTTGAATGAAAATATAAGCTATATTAAT CTTGTAGGCTTGGATAAAAGTGGTATGTTTGTAGAACATCTTAAAAATATAGAATCTAAAATCCCTCTAGGAAGCATTCT TTTGCCAAATTTAGATTATATGAAAAAATACATTACAGGCAACAATACTTCAGTTTTTGGAGAAAATACTTATTTTGGGA TTAAGATGTTTGTAAGAAAAGAAAAAGAATTGTCCTTTGTTTTAGATGTAGCGATTCCATTTGATGAAAGCATCACATAC AAGGATTATATTAAACAACCAAAAATTGAGGATTTTCTCTCATTAAAAAATATTTTAGAAGTATTGTTTCGGCTTAAATG TGATTTATATGAAAAATCTTTTATTCCTATTGCTATGGTTAATAAGCTCGTTTCTTTATCTAATATCCCAAGTAAAAAGA TATTAACTATTTTTTCGCAAGAAAAATTATGCTAA
Upstream 100 bases:
>100_bases ATTATCCGCAATAGCGATGTAGGGTTTGCTAGAGTAAAAACTTATTCCAATAATTTTATTGTGCCTGTTCAGATTCAAAA ATTTGAAGTAAGGGATTAAA
Downstream 100 bases:
>100_bases GCTACCCAATAATTCATTCTAAATAAGGAGTTTATATGGCTACAAGTGAGAGTTTTAAGGATTTTGTGTTAGAAAATCTT AAAAGCGCATTAGAGGATAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 464; Mature: 463
Protein sequence:
>464_residues MAYFNEKASKINHQYIIENPKVKDYLAKCEKIGQNLPLEVDSQAITSPISNIQNKFSSCIERVITIDGGYQEVNINDNFP SQKLCYYNIGILMFSVKDLEVVERQQTINPSDIGKLENLERFSFVIPTQNIRLKNEDFISTFRKTLYEEVFLKNYLSEGN EKSSFIHTIKWLIFKEYLDSNSKGKSSITFACPHCKKMQTFQKQTPNYLDEQNNFVKCSECENIIYITDCFDLHTLIDEI NGATLIESYIMSAFEIILMLSMFRFLFEENTIQWLPKILFIKDGPLALFSRLDDFAFKIVRPFIQFLYAKSLNENISYIN LVGLDKSGMFVEHLKNIESKIPLGSILLPNLDYMKKYITGNNTSVFGENTYFGIKMFVRKEKELSFVLDVAIPFDESITY KDYIKQPKIEDFLSLKNILEVLFRLKCDLYEKSFIPIAMVNKLVSLSNIPSKKILTIFSQEKLC
Sequences:
>Translated_464_residues MAYFNEKASKINHQYIIENPKVKDYLAKCEKIGQNLPLEVDSQAITSPISNIQNKFSSCIERVITIDGGYQEVNINDNFP SQKLCYYNIGILMFSVKDLEVVERQQTINPSDIGKLENLERFSFVIPTQNIRLKNEDFISTFRKTLYEEVFLKNYLSEGN EKSSFIHTIKWLIFKEYLDSNSKGKSSITFACPHCKKMQTFQKQTPNYLDEQNNFVKCSECENIIYITDCFDLHTLIDEI NGATLIESYIMSAFEIILMLSMFRFLFEENTIQWLPKILFIKDGPLALFSRLDDFAFKIVRPFIQFLYAKSLNENISYIN LVGLDKSGMFVEHLKNIESKIPLGSILLPNLDYMKKYITGNNTSVFGENTYFGIKMFVRKEKELSFVLDVAIPFDESITY KDYIKQPKIEDFLSLKNILEVLFRLKCDLYEKSFIPIAMVNKLVSLSNIPSKKILTIFSQEKLC >Mature_463_residues AYFNEKASKINHQYIIENPKVKDYLAKCEKIGQNLPLEVDSQAITSPISNIQNKFSSCIERVITIDGGYQEVNINDNFPS QKLCYYNIGILMFSVKDLEVVERQQTINPSDIGKLENLERFSFVIPTQNIRLKNEDFISTFRKTLYEEVFLKNYLSEGNE KSSFIHTIKWLIFKEYLDSNSKGKSSITFACPHCKKMQTFQKQTPNYLDEQNNFVKCSECENIIYITDCFDLHTLIDEIN GATLIESYIMSAFEIILMLSMFRFLFEENTIQWLPKILFIKDGPLALFSRLDDFAFKIVRPFIQFLYAKSLNENISYINL VGLDKSGMFVEHLKNIESKIPLGSILLPNLDYMKKYITGNNTSVFGENTYFGIKMFVRKEKELSFVLDVAIPFDESITYK DYIKQPKIEDFLSLKNILEVLFRLKCDLYEKSFIPIAMVNKLVSLSNIPSKKILTIFSQEKLC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53946; Mature: 53815
Theoretical pI: Translated: 6.38; Mature: 6.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYFNEKASKINHQYIIENPKVKDYLAKCEKIGQNLPLEVDSQAITSPISNIQNKFSSCI CCCCCCHHHHCCCEEEECCCCHHHHHHHHHHHCCCCCCEECHHHHHHHHHHHHHHHHHHH ERVITIDGGYQEVNINDNFPSQKLCYYNIGILMFSVKDLEVVERQQTINPSDIGKLENLE HHHEECCCCEEEEECCCCCCCCCEEEEEEEEEEEECHHHHHHHHHHCCCHHHHHHHHCCC RFSFVIPTQNIRLKNEDFISTFRKTLYEEVFLKNYLSEGNEKSSFIHTIKWLIFKEYLDS HHEEEECCCCEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC NSKGKSSITFACPHCKKMQTFQKQTPNYLDEQNNFVKCSECENIIYITDCFDLHTLIDEI CCCCCCCEEEECCCHHHHHHHHHCCCCHHHCCCCEEEECCCCCEEEEECHHHHHHHHHHC NGATLIESYIMSAFEIILMLSMFRFLFEENTIQWLPKILFIKDGPLALFSRLDDFAFKIV CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCEEEEECCCHHHHHHHHHHHHHHHH RPFIQFLYAKSLNENISYINLVGLDKSGMFVEHLKNIESKIPLGSILLPNLDYMKKYITG HHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCEECCCHHHHHHHHCC NNTSVFGENTYFGIKMFVRKEKELSFVLDVAIPFDESITYKDYIKQPKIEDFLSLKNILE CCCEEECCCCEEEEHEEEECCCCCEEEEEEEECCCCCCCHHHHHCCCCHHHHHHHHHHHH VLFRLKCDLYEKSFIPIAMVNKLVSLSNIPSKKILTIFSQEKLC HHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHEEECCCCCCC >Mature Secondary Structure AYFNEKASKINHQYIIENPKVKDYLAKCEKIGQNLPLEVDSQAITSPISNIQNKFSSCI CCCCCHHHHCCCEEEECCCCHHHHHHHHHHHCCCCCCEECHHHHHHHHHHHHHHHHHHH ERVITIDGGYQEVNINDNFPSQKLCYYNIGILMFSVKDLEVVERQQTINPSDIGKLENLE HHHEECCCCEEEEECCCCCCCCCEEEEEEEEEEEECHHHHHHHHHHCCCHHHHHHHHCCC RFSFVIPTQNIRLKNEDFISTFRKTLYEEVFLKNYLSEGNEKSSFIHTIKWLIFKEYLDS HHEEEECCCCEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC NSKGKSSITFACPHCKKMQTFQKQTPNYLDEQNNFVKCSECENIIYITDCFDLHTLIDEI CCCCCCCEEEECCCHHHHHHHHHCCCCHHHCCCCEEEECCCCCEEEEECHHHHHHHHHHC NGATLIESYIMSAFEIILMLSMFRFLFEENTIQWLPKILFIKDGPLALFSRLDDFAFKIV CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCEEEEECCCHHHHHHHHHHHHHHHH RPFIQFLYAKSLNENISYINLVGLDKSGMFVEHLKNIESKIPLGSILLPNLDYMKKYITG HHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCEECCCHHHHHHHHCC NNTSVFGENTYFGIKMFVRKEKELSFVLDVAIPFDESITYKDYIKQPKIEDFLSLKNILE CCCEEECCCCEEEEHEEEECCCCCEEEEEEEECCCCCCCHHHHHCCCCHHHHHHHHHHHH VLFRLKCDLYEKSFIPIAMVNKLVSLSNIPSKKILTIFSQEKLC HHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA