Definition Helicobacter hepaticus ATCC 51449 chromosome, complete genome.
Accession NC_004917
Length 1,799,146

Click here to switch to the map view.

The map label for this gene is 32266538

Identifier: 32266538

GI number: 32266538

Start: 1017751

End: 1019649

Strand: Direct

Name: 32266538

Synonym: HH1039

Alternate gene names: NA

Gene position: 1017751-1019649 (Clockwise)

Preceding gene: 32266537

Following gene: 32266539

Centisome position: 56.57

GC content: 30.07

Gene sequence:

>1899_bases
ATGGGCATTACAGATGAATTTCAAAAGAAACCTCAAGGAGAGTTGATAGAGGCAAAAACAAAATTTTTTGAGGAAATTAA
GAAAGATAAAAATTTTGTTGGGAGTTTGTATGATTTGGACTACGAAGAAGCCAAAATCTTAGTCAATGATTTTGATAAGA
ATGCTATCAAAGGTTTGCCTCACGGCTGTTTATTGGTTGCAATTTATAATAATGAATTAAGACAAAATCAAACAGAGGCT
ATTTTACTTAGAGTGATTGGCGTTTGTGAAATTCCACAAAAGAAAGAGATTATCCAAAGTATGACAGATTCTTATATTTC
AAAAAAAGAAAATAGAGCAAACACAGACCCAGATATTTATACAAAATATTTTTATCAATTTTCGGGCTTATCTTGTAGGG
TTCTAGGGACATTCTTTTTAGATAAAGATAAAAAATTAATCTTTGGAACAGATATAGAAAATTTCTTAGGAGCGCATAAT
TATAGAGTGTATAAGCCTCAAAAACAGCAGCTACAAATCATTGTAAATGAGAATACAGAATCTAGCAATAACGAAACACA
AGAAAAGATAGGAATCCTAAGATATGCTTCTAGCCAATCTTATGATGAAGATAAAAACTATGCTCCAGATGTTTTCTTAA
GGACAAATGATATAGTTGCAAGACGCACAGCCTTTTTTGGAATGACAAGAACAGGTAAGTCTAATACAATCAAGATTATT
ATCAGTGCTATTGAAAATCTTAATACAAAACAAGAGAGAAAAATAGGGCAAATTATTTTTGATGTTAATGGTGAATACAC
CTTTAGCAATAGACAAGATGAAGGCTCAATCTATGATAGATTTAAACAAAGAGTCATTCGCTTTAGCACTTCGCTTAAAA
AATCCCAACAACACCCAGATGTTAGAGCAGTGCAGTATAATTTTTATAATGATGAAACTTTGGAAGAATCCTTTAACTTG
CTGTGTGATGAAATTACACAATCTGATAAAAAAGCGGACTATATAACGCATTTTACCAATATCAATATGTTTGAAAATAT
TAGTGATAAAAACTCTAGTGAATATCGCAATCAAGAGCGCAAAAAAGCCTTATATAAGTGCATATTATATAGAGCTAAAT
TTGAAACTCCACAACAAATACTTAAGTTTTCTGGTTTTAGCAGCTCAACTTTAAATTCTATACCAAGAGAGGGGTTAGAT
ATAAAAAAGGCTTGCGAATACTTTGATGAGATTAAGATAGACAATAATAATGGCAATATTGATAAAAAATATGCTGAAGA
CAAGGATTGGGAATCTTTATTAAAAGTGTTTCAAGGGACTAAGGTTTCGGGTTATAGATTTTTAACAAAATTTAATTATT
TGCATTCCTTAAAAGGTGAAAATGACTATAAAAAAGATATAGATTCTGCATTGCGTGAGGGAAAAATTATTTTAGTAGAT
TTATCCACCGCTTCAACCGAAACACAGCAAAAATATATTGATAGGCTTTGTGAGTATATATTTAAAAAATCTATGGAAAA
ATTCACTAATGATGAAGAGCCTGAATTTATCCAAATGTATTTTGAAGAAGCACATAATATTTTTCCAAAAGATGATAAAG
ATTTAAAAAACATTTATAATCGTTTGGCAAAAGAGGGAGCAAAGCTTAAAATTGGCATTAGTTATTCTACTCAAGAGGTC
AGCTCTATTGCTCCAAGTATTTTAAAAAATACGCAAAATTGGTTTATTTCTCATCTTAACAATAAAGATGAAATTAAAGC
GTTAGAAAAGTATTATGATTTTGCTGATTTCTCTCAAAATATTATCCGCAATAGCGATGTAGGGTTTGCTAGAGTAAAAA
CTTATTCCAATAATTTTATTGTGCCTGTTCAGATTCAAAAATTTGAAGTAAGGGATTAA

Upstream 100 bases:

>100_bases
GCCAATGATAAAGAAAAAAAGGTAACAAGAATTTGGGGTGCAAAAAAAGGCAAGGCAACAAAAATTGATAGAATCTTAGT
TTTGCAAAAGGAGTAGGCAA

Downstream 100 bases:

>100_bases
AATGGCATATTTTAATGAAAAAGCCTCCAAAATCAATCATCAATATATTATTGAGAATCCAAAGGTTAAAGATTATCTTG
CAAAATGCGAAAAGATAGGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 632; Mature: 631

Protein sequence:

>632_residues
MGITDEFQKKPQGELIEAKTKFFEEIKKDKNFVGSLYDLDYEEAKILVNDFDKNAIKGLPHGCLLVAIYNNELRQNQTEA
ILLRVIGVCEIPQKKEIIQSMTDSYISKKENRANTDPDIYTKYFYQFSGLSCRVLGTFFLDKDKKLIFGTDIENFLGAHN
YRVYKPQKQQLQIIVNENTESSNNETQEKIGILRYASSQSYDEDKNYAPDVFLRTNDIVARRTAFFGMTRTGKSNTIKII
ISAIENLNTKQERKIGQIIFDVNGEYTFSNRQDEGSIYDRFKQRVIRFSTSLKKSQQHPDVRAVQYNFYNDETLEESFNL
LCDEITQSDKKADYITHFTNINMFENISDKNSSEYRNQERKKALYKCILYRAKFETPQQILKFSGFSSSTLNSIPREGLD
IKKACEYFDEIKIDNNNGNIDKKYAEDKDWESLLKVFQGTKVSGYRFLTKFNYLHSLKGENDYKKDIDSALREGKIILVD
LSTASTETQQKYIDRLCEYIFKKSMEKFTNDEEPEFIQMYFEEAHNIFPKDDKDLKNIYNRLAKEGAKLKIGISYSTQEV
SSIAPSILKNTQNWFISHLNNKDEIKALEKYYDFADFSQNIIRNSDVGFARVKTYSNNFIVPVQIQKFEVRD

Sequences:

>Translated_632_residues
MGITDEFQKKPQGELIEAKTKFFEEIKKDKNFVGSLYDLDYEEAKILVNDFDKNAIKGLPHGCLLVAIYNNELRQNQTEA
ILLRVIGVCEIPQKKEIIQSMTDSYISKKENRANTDPDIYTKYFYQFSGLSCRVLGTFFLDKDKKLIFGTDIENFLGAHN
YRVYKPQKQQLQIIVNENTESSNNETQEKIGILRYASSQSYDEDKNYAPDVFLRTNDIVARRTAFFGMTRTGKSNTIKII
ISAIENLNTKQERKIGQIIFDVNGEYTFSNRQDEGSIYDRFKQRVIRFSTSLKKSQQHPDVRAVQYNFYNDETLEESFNL
LCDEITQSDKKADYITHFTNINMFENISDKNSSEYRNQERKKALYKCILYRAKFETPQQILKFSGFSSSTLNSIPREGLD
IKKACEYFDEIKIDNNNGNIDKKYAEDKDWESLLKVFQGTKVSGYRFLTKFNYLHSLKGENDYKKDIDSALREGKIILVD
LSTASTETQQKYIDRLCEYIFKKSMEKFTNDEEPEFIQMYFEEAHNIFPKDDKDLKNIYNRLAKEGAKLKIGISYSTQEV
SSIAPSILKNTQNWFISHLNNKDEIKALEKYYDFADFSQNIIRNSDVGFARVKTYSNNFIVPVQIQKFEVRD
>Mature_631_residues
GITDEFQKKPQGELIEAKTKFFEEIKKDKNFVGSLYDLDYEEAKILVNDFDKNAIKGLPHGCLLVAIYNNELRQNQTEAI
LLRVIGVCEIPQKKEIIQSMTDSYISKKENRANTDPDIYTKYFYQFSGLSCRVLGTFFLDKDKKLIFGTDIENFLGAHNY
RVYKPQKQQLQIIVNENTESSNNETQEKIGILRYASSQSYDEDKNYAPDVFLRTNDIVARRTAFFGMTRTGKSNTIKIII
SAIENLNTKQERKIGQIIFDVNGEYTFSNRQDEGSIYDRFKQRVIRFSTSLKKSQQHPDVRAVQYNFYNDETLEESFNLL
CDEITQSDKKADYITHFTNINMFENISDKNSSEYRNQERKKALYKCILYRAKFETPQQILKFSGFSSSTLNSIPREGLDI
KKACEYFDEIKIDNNNGNIDKKYAEDKDWESLLKVFQGTKVSGYRFLTKFNYLHSLKGENDYKKDIDSALREGKIILVDL
STASTETQQKYIDRLCEYIFKKSMEKFTNDEEPEFIQMYFEEAHNIFPKDDKDLKNIYNRLAKEGAKLKIGISYSTQEVS
SIAPSILKNTQNWFISHLNNKDEIKALEKYYDFADFSQNIIRNSDVGFARVKTYSNNFIVPVQIQKFEVRD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 73804; Mature: 73673

Theoretical pI: Translated: 6.87; Mature: 6.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGITDEFQKKPQGELIEAKTKFFEEIKKDKNFVGSLYDLDYEEAKILVNDFDKNAIKGLP
CCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHEEEEECCCCHHHCCCC
HGCLLVAIYNNELRQNQTEAILLRVIGVCEIPQKKEIIQSMTDSYISKKENRANTDPDIY
CCEEEEEEECCHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHH
TKYFYQFSGLSCRVLGTFFLDKDKKLIFGTDIENFLGAHNYRVYKPQKQQLQIIVNENTE
HHHHHHHCCCEEEEEEEEEECCCCCEEEECCHHHHHCCCCEEEECCCCCCEEEEEECCCC
SSNNETQEKIGILRYASSQSYDEDKNYAPDVFLRTNDIVARRTAFFGMTRTGKSNTIKII
CCCCHHHHHHHHHEECCCCCCCCCCCCCCCEEEECCCHHHHHHHHHCEECCCCCCCHHHH
ISAIENLNTKQERKIGQIIFDVNGEYTFSNRQDEGSIYDRFKQRVIRFSTSLKKSQQHPD
HHHHHCCCCHHHHHHCEEEEECCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
VRAVQYNFYNDETLEESFNLLCDEITQSDKKADYITHFTNINMFENISDKNSSEYRNQER
CEEEEEECCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCHHHCCCCCCCHHHHHHHH
KKALYKCILYRAKFETPQQILKFSGFSSSTLNSIPREGLDIKKACEYFDEIKIDNNNGNI
HHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHCCCCCCCHHHHHHHHHHEEEECCCCCC
DKKYAEDKDWESLLKVFQGTKVSGYRFLTKFNYLHSLKGENDYKKDIDSALREGKIILVD
CCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEE
LSTASTETQQKYIDRLCEYIFKKSMEKFTNDEEPEFIQMYFEEAHNIFPKDDKDLKNIYN
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHH
RLAKEGAKLKIGISYSTQEVSSIAPSILKNTQNWFISHLNNKDEIKALEKYYDFADFSQN
HHHCCCCEEEEEEECCHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
IIRNSDVGFARVKTYSNNFIVPVQIQKFEVRD
HHCCCCCCEEEEEEECCCEEEEEEEEEEECCC
>Mature Secondary Structure 
GITDEFQKKPQGELIEAKTKFFEEIKKDKNFVGSLYDLDYEEAKILVNDFDKNAIKGLP
CCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHEEEEECCCCHHHCCCC
HGCLLVAIYNNELRQNQTEAILLRVIGVCEIPQKKEIIQSMTDSYISKKENRANTDPDIY
CCEEEEEEECCHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHH
TKYFYQFSGLSCRVLGTFFLDKDKKLIFGTDIENFLGAHNYRVYKPQKQQLQIIVNENTE
HHHHHHHCCCEEEEEEEEEECCCCCEEEECCHHHHHCCCCEEEECCCCCCEEEEEECCCC
SSNNETQEKIGILRYASSQSYDEDKNYAPDVFLRTNDIVARRTAFFGMTRTGKSNTIKII
CCCCHHHHHHHHHEECCCCCCCCCCCCCCCEEEECCCHHHHHHHHHCEECCCCCCCHHHH
ISAIENLNTKQERKIGQIIFDVNGEYTFSNRQDEGSIYDRFKQRVIRFSTSLKKSQQHPD
HHHHHCCCCHHHHHHCEEEEECCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
VRAVQYNFYNDETLEESFNLLCDEITQSDKKADYITHFTNINMFENISDKNSSEYRNQER
CEEEEEECCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCHHHCCCCCCCHHHHHHHH
KKALYKCILYRAKFETPQQILKFSGFSSSTLNSIPREGLDIKKACEYFDEIKIDNNNGNI
HHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHCCCCCCCHHHHHHHHHHEEEECCCCCC
DKKYAEDKDWESLLKVFQGTKVSGYRFLTKFNYLHSLKGENDYKKDIDSALREGKIILVD
CCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEE
LSTASTETQQKYIDRLCEYIFKKSMEKFTNDEEPEFIQMYFEEAHNIFPKDDKDLKNIYN
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHH
RLAKEGAKLKIGISYSTQEVSSIAPSILKNTQNWFISHLNNKDEIKALEKYYDFADFSQN
HHHCCCCEEEEEEECCHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
IIRNSDVGFARVKTYSNNFIVPVQIQKFEVRD
HHCCCCCCEEEEEEECCCEEEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA