| Definition | Helicobacter hepaticus ATCC 51449 chromosome, complete genome. |
|---|---|
| Accession | NC_004917 |
| Length | 1,799,146 |
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The map label for this gene is 32266538
Identifier: 32266538
GI number: 32266538
Start: 1017751
End: 1019649
Strand: Direct
Name: 32266538
Synonym: HH1039
Alternate gene names: NA
Gene position: 1017751-1019649 (Clockwise)
Preceding gene: 32266537
Following gene: 32266539
Centisome position: 56.57
GC content: 30.07
Gene sequence:
>1899_bases ATGGGCATTACAGATGAATTTCAAAAGAAACCTCAAGGAGAGTTGATAGAGGCAAAAACAAAATTTTTTGAGGAAATTAA GAAAGATAAAAATTTTGTTGGGAGTTTGTATGATTTGGACTACGAAGAAGCCAAAATCTTAGTCAATGATTTTGATAAGA ATGCTATCAAAGGTTTGCCTCACGGCTGTTTATTGGTTGCAATTTATAATAATGAATTAAGACAAAATCAAACAGAGGCT ATTTTACTTAGAGTGATTGGCGTTTGTGAAATTCCACAAAAGAAAGAGATTATCCAAAGTATGACAGATTCTTATATTTC AAAAAAAGAAAATAGAGCAAACACAGACCCAGATATTTATACAAAATATTTTTATCAATTTTCGGGCTTATCTTGTAGGG TTCTAGGGACATTCTTTTTAGATAAAGATAAAAAATTAATCTTTGGAACAGATATAGAAAATTTCTTAGGAGCGCATAAT TATAGAGTGTATAAGCCTCAAAAACAGCAGCTACAAATCATTGTAAATGAGAATACAGAATCTAGCAATAACGAAACACA AGAAAAGATAGGAATCCTAAGATATGCTTCTAGCCAATCTTATGATGAAGATAAAAACTATGCTCCAGATGTTTTCTTAA GGACAAATGATATAGTTGCAAGACGCACAGCCTTTTTTGGAATGACAAGAACAGGTAAGTCTAATACAATCAAGATTATT ATCAGTGCTATTGAAAATCTTAATACAAAACAAGAGAGAAAAATAGGGCAAATTATTTTTGATGTTAATGGTGAATACAC CTTTAGCAATAGACAAGATGAAGGCTCAATCTATGATAGATTTAAACAAAGAGTCATTCGCTTTAGCACTTCGCTTAAAA AATCCCAACAACACCCAGATGTTAGAGCAGTGCAGTATAATTTTTATAATGATGAAACTTTGGAAGAATCCTTTAACTTG CTGTGTGATGAAATTACACAATCTGATAAAAAAGCGGACTATATAACGCATTTTACCAATATCAATATGTTTGAAAATAT TAGTGATAAAAACTCTAGTGAATATCGCAATCAAGAGCGCAAAAAAGCCTTATATAAGTGCATATTATATAGAGCTAAAT TTGAAACTCCACAACAAATACTTAAGTTTTCTGGTTTTAGCAGCTCAACTTTAAATTCTATACCAAGAGAGGGGTTAGAT ATAAAAAAGGCTTGCGAATACTTTGATGAGATTAAGATAGACAATAATAATGGCAATATTGATAAAAAATATGCTGAAGA CAAGGATTGGGAATCTTTATTAAAAGTGTTTCAAGGGACTAAGGTTTCGGGTTATAGATTTTTAACAAAATTTAATTATT TGCATTCCTTAAAAGGTGAAAATGACTATAAAAAAGATATAGATTCTGCATTGCGTGAGGGAAAAATTATTTTAGTAGAT TTATCCACCGCTTCAACCGAAACACAGCAAAAATATATTGATAGGCTTTGTGAGTATATATTTAAAAAATCTATGGAAAA ATTCACTAATGATGAAGAGCCTGAATTTATCCAAATGTATTTTGAAGAAGCACATAATATTTTTCCAAAAGATGATAAAG ATTTAAAAAACATTTATAATCGTTTGGCAAAAGAGGGAGCAAAGCTTAAAATTGGCATTAGTTATTCTACTCAAGAGGTC AGCTCTATTGCTCCAAGTATTTTAAAAAATACGCAAAATTGGTTTATTTCTCATCTTAACAATAAAGATGAAATTAAAGC GTTAGAAAAGTATTATGATTTTGCTGATTTCTCTCAAAATATTATCCGCAATAGCGATGTAGGGTTTGCTAGAGTAAAAA CTTATTCCAATAATTTTATTGTGCCTGTTCAGATTCAAAAATTTGAAGTAAGGGATTAA
Upstream 100 bases:
>100_bases GCCAATGATAAAGAAAAAAAGGTAACAAGAATTTGGGGTGCAAAAAAAGGCAAGGCAACAAAAATTGATAGAATCTTAGT TTTGCAAAAGGAGTAGGCAA
Downstream 100 bases:
>100_bases AATGGCATATTTTAATGAAAAAGCCTCCAAAATCAATCATCAATATATTATTGAGAATCCAAAGGTTAAAGATTATCTTG CAAAATGCGAAAAGATAGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 632; Mature: 631
Protein sequence:
>632_residues MGITDEFQKKPQGELIEAKTKFFEEIKKDKNFVGSLYDLDYEEAKILVNDFDKNAIKGLPHGCLLVAIYNNELRQNQTEA ILLRVIGVCEIPQKKEIIQSMTDSYISKKENRANTDPDIYTKYFYQFSGLSCRVLGTFFLDKDKKLIFGTDIENFLGAHN YRVYKPQKQQLQIIVNENTESSNNETQEKIGILRYASSQSYDEDKNYAPDVFLRTNDIVARRTAFFGMTRTGKSNTIKII ISAIENLNTKQERKIGQIIFDVNGEYTFSNRQDEGSIYDRFKQRVIRFSTSLKKSQQHPDVRAVQYNFYNDETLEESFNL LCDEITQSDKKADYITHFTNINMFENISDKNSSEYRNQERKKALYKCILYRAKFETPQQILKFSGFSSSTLNSIPREGLD IKKACEYFDEIKIDNNNGNIDKKYAEDKDWESLLKVFQGTKVSGYRFLTKFNYLHSLKGENDYKKDIDSALREGKIILVD LSTASTETQQKYIDRLCEYIFKKSMEKFTNDEEPEFIQMYFEEAHNIFPKDDKDLKNIYNRLAKEGAKLKIGISYSTQEV SSIAPSILKNTQNWFISHLNNKDEIKALEKYYDFADFSQNIIRNSDVGFARVKTYSNNFIVPVQIQKFEVRD
Sequences:
>Translated_632_residues MGITDEFQKKPQGELIEAKTKFFEEIKKDKNFVGSLYDLDYEEAKILVNDFDKNAIKGLPHGCLLVAIYNNELRQNQTEA ILLRVIGVCEIPQKKEIIQSMTDSYISKKENRANTDPDIYTKYFYQFSGLSCRVLGTFFLDKDKKLIFGTDIENFLGAHN YRVYKPQKQQLQIIVNENTESSNNETQEKIGILRYASSQSYDEDKNYAPDVFLRTNDIVARRTAFFGMTRTGKSNTIKII ISAIENLNTKQERKIGQIIFDVNGEYTFSNRQDEGSIYDRFKQRVIRFSTSLKKSQQHPDVRAVQYNFYNDETLEESFNL LCDEITQSDKKADYITHFTNINMFENISDKNSSEYRNQERKKALYKCILYRAKFETPQQILKFSGFSSSTLNSIPREGLD IKKACEYFDEIKIDNNNGNIDKKYAEDKDWESLLKVFQGTKVSGYRFLTKFNYLHSLKGENDYKKDIDSALREGKIILVD LSTASTETQQKYIDRLCEYIFKKSMEKFTNDEEPEFIQMYFEEAHNIFPKDDKDLKNIYNRLAKEGAKLKIGISYSTQEV SSIAPSILKNTQNWFISHLNNKDEIKALEKYYDFADFSQNIIRNSDVGFARVKTYSNNFIVPVQIQKFEVRD >Mature_631_residues GITDEFQKKPQGELIEAKTKFFEEIKKDKNFVGSLYDLDYEEAKILVNDFDKNAIKGLPHGCLLVAIYNNELRQNQTEAI LLRVIGVCEIPQKKEIIQSMTDSYISKKENRANTDPDIYTKYFYQFSGLSCRVLGTFFLDKDKKLIFGTDIENFLGAHNY RVYKPQKQQLQIIVNENTESSNNETQEKIGILRYASSQSYDEDKNYAPDVFLRTNDIVARRTAFFGMTRTGKSNTIKIII SAIENLNTKQERKIGQIIFDVNGEYTFSNRQDEGSIYDRFKQRVIRFSTSLKKSQQHPDVRAVQYNFYNDETLEESFNLL CDEITQSDKKADYITHFTNINMFENISDKNSSEYRNQERKKALYKCILYRAKFETPQQILKFSGFSSSTLNSIPREGLDI KKACEYFDEIKIDNNNGNIDKKYAEDKDWESLLKVFQGTKVSGYRFLTKFNYLHSLKGENDYKKDIDSALREGKIILVDL STASTETQQKYIDRLCEYIFKKSMEKFTNDEEPEFIQMYFEEAHNIFPKDDKDLKNIYNRLAKEGAKLKIGISYSTQEVS SIAPSILKNTQNWFISHLNNKDEIKALEKYYDFADFSQNIIRNSDVGFARVKTYSNNFIVPVQIQKFEVRD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 73804; Mature: 73673
Theoretical pI: Translated: 6.87; Mature: 6.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGITDEFQKKPQGELIEAKTKFFEEIKKDKNFVGSLYDLDYEEAKILVNDFDKNAIKGLP CCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHEEEEECCCCHHHCCCC HGCLLVAIYNNELRQNQTEAILLRVIGVCEIPQKKEIIQSMTDSYISKKENRANTDPDIY CCEEEEEEECCHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHH TKYFYQFSGLSCRVLGTFFLDKDKKLIFGTDIENFLGAHNYRVYKPQKQQLQIIVNENTE HHHHHHHCCCEEEEEEEEEECCCCCEEEECCHHHHHCCCCEEEECCCCCCEEEEEECCCC SSNNETQEKIGILRYASSQSYDEDKNYAPDVFLRTNDIVARRTAFFGMTRTGKSNTIKII CCCCHHHHHHHHHEECCCCCCCCCCCCCCCEEEECCCHHHHHHHHHCEECCCCCCCHHHH ISAIENLNTKQERKIGQIIFDVNGEYTFSNRQDEGSIYDRFKQRVIRFSTSLKKSQQHPD HHHHHCCCCHHHHHHCEEEEECCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC VRAVQYNFYNDETLEESFNLLCDEITQSDKKADYITHFTNINMFENISDKNSSEYRNQER CEEEEEECCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCHHHCCCCCCCHHHHHHHH KKALYKCILYRAKFETPQQILKFSGFSSSTLNSIPREGLDIKKACEYFDEIKIDNNNGNI HHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHCCCCCCCHHHHHHHHHHEEEECCCCCC DKKYAEDKDWESLLKVFQGTKVSGYRFLTKFNYLHSLKGENDYKKDIDSALREGKIILVD CCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEE LSTASTETQQKYIDRLCEYIFKKSMEKFTNDEEPEFIQMYFEEAHNIFPKDDKDLKNIYN CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHH RLAKEGAKLKIGISYSTQEVSSIAPSILKNTQNWFISHLNNKDEIKALEKYYDFADFSQN HHHCCCCEEEEEEECCHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHH IIRNSDVGFARVKTYSNNFIVPVQIQKFEVRD HHCCCCCCEEEEEEECCCEEEEEEEEEEECCC >Mature Secondary Structure GITDEFQKKPQGELIEAKTKFFEEIKKDKNFVGSLYDLDYEEAKILVNDFDKNAIKGLP CCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHEEEEECCCCHHHCCCC HGCLLVAIYNNELRQNQTEAILLRVIGVCEIPQKKEIIQSMTDSYISKKENRANTDPDIY CCEEEEEEECCHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHH TKYFYQFSGLSCRVLGTFFLDKDKKLIFGTDIENFLGAHNYRVYKPQKQQLQIIVNENTE HHHHHHHCCCEEEEEEEEEECCCCCEEEECCHHHHHCCCCEEEECCCCCCEEEEEECCCC SSNNETQEKIGILRYASSQSYDEDKNYAPDVFLRTNDIVARRTAFFGMTRTGKSNTIKII CCCCHHHHHHHHHEECCCCCCCCCCCCCCCEEEECCCHHHHHHHHHCEECCCCCCCHHHH ISAIENLNTKQERKIGQIIFDVNGEYTFSNRQDEGSIYDRFKQRVIRFSTSLKKSQQHPD HHHHHCCCCHHHHHHCEEEEECCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC VRAVQYNFYNDETLEESFNLLCDEITQSDKKADYITHFTNINMFENISDKNSSEYRNQER CEEEEEECCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCHHHCCCCCCCHHHHHHHH KKALYKCILYRAKFETPQQILKFSGFSSSTLNSIPREGLDIKKACEYFDEIKIDNNNGNI HHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHCCCCCCCHHHHHHHHHHEEEECCCCCC DKKYAEDKDWESLLKVFQGTKVSGYRFLTKFNYLHSLKGENDYKKDIDSALREGKIILVD CCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEE LSTASTETQQKYIDRLCEYIFKKSMEKFTNDEEPEFIQMYFEEAHNIFPKDDKDLKNIYN CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHH RLAKEGAKLKIGISYSTQEVSSIAPSILKNTQNWFISHLNNKDEIKALEKYYDFADFSQN HHHCCCCEEEEEEECCHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHH IIRNSDVGFARVKTYSNNFIVPVQIQKFEVRD HHCCCCCCEEEEEEECCCEEEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA