Definition Helicobacter hepaticus ATCC 51449 chromosome, complete genome.
Accession NC_004917
Length 1,799,146

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The map label for this gene is 32266539

Identifier: 32266539

GI number: 32266539

Start: 1019651

End: 1021045

Strand: Direct

Name: 32266539

Synonym: HH1040

Alternate gene names: NA

Gene position: 1019651-1021045 (Clockwise)

Preceding gene: 32266538

Following gene: 32266540

Centisome position: 56.67

GC content: 28.75

Gene sequence:

>1395_bases
ATGGCATATTTTAATGAAAAAGCCTCCAAAATCAATCATCAATATATTATTGAGAATCCAAAGGTTAAAGATTATCTTGC
AAAATGCGAAAAGATAGGACAAAATCTACCTTTGGAAGTTGATTCTCAAGCTATCACTTCACCAATATCTAACATACAAA
ACAAATTTTCCTCTTGCATTGAACGCGTCATCACAATAGATGGTGGCTACCAAGAAGTAAATATCAATGATAATTTTCCC
TCACAAAAACTTTGTTACTATAATATAGGTATTCTTATGTTTAGTGTTAAAGATTTAGAAGTAGTTGAAAGGCAACAAAC
AATTAACCCAAGCGATATAGGCAAATTAGAGAATCTTGAACGATTTAGCTTTGTGATACCCACACAAAATATTCGTTTAA
AAAATGAGGATTTTATCTCTACATTTAGAAAAACACTTTATGAAGAAGTTTTCCTCAAAAATTATTTAAGCGAGGGAAAT
GAAAAGAGTTCATTTATCCATACAATTAAATGGCTCATTTTTAAAGAATATTTAGATTCAAATTCTAAAGGGAAAAGTTC
TATAACATTTGCGTGTCCTCACTGCAAGAAAATGCAGACATTCCAAAAGCAAACCCCCAATTATTTAGATGAGCAAAATA
ATTTTGTAAAATGTTCAGAATGTGAAAATATCATTTACATTACAGATTGTTTTGACTTACATACTCTCATTGATGAAATC
AATGGAGCAACGCTTATAGAATCCTACATTATGAGTGCTTTTGAAATTATTTTAATGCTTTCAATGTTTCGATTCCTTTT
TGAAGAAAACACTATACAATGGCTACCAAAGATTCTCTTTATCAAAGATGGTCCTTTGGCTTTATTTAGTCGTCTTGATG
ATTTTGCTTTTAAAATTGTGCGTCCGTTTATACAATTTCTTTATGCAAAATCTTTGAATGAAAATATAAGCTATATTAAT
CTTGTAGGCTTGGATAAAAGTGGTATGTTTGTAGAACATCTTAAAAATATAGAATCTAAAATCCCTCTAGGAAGCATTCT
TTTGCCAAATTTAGATTATATGAAAAAATACATTACAGGCAACAATACTTCAGTTTTTGGAGAAAATACTTATTTTGGGA
TTAAGATGTTTGTAAGAAAAGAAAAAGAATTGTCCTTTGTTTTAGATGTAGCGATTCCATTTGATGAAAGCATCACATAC
AAGGATTATATTAAACAACCAAAAATTGAGGATTTTCTCTCATTAAAAAATATTTTAGAAGTATTGTTTCGGCTTAAATG
TGATTTATATGAAAAATCTTTTATTCCTATTGCTATGGTTAATAAGCTCGTTTCTTTATCTAATATCCCAAGTAAAAAGA
TATTAACTATTTTTTCGCAAGAAAAATTATGCTAA

Upstream 100 bases:

>100_bases
ATTATCCGCAATAGCGATGTAGGGTTTGCTAGAGTAAAAACTTATTCCAATAATTTTATTGTGCCTGTTCAGATTCAAAA
ATTTGAAGTAAGGGATTAAA

Downstream 100 bases:

>100_bases
GCTACCCAATAATTCATTCTAAATAAGGAGTTTATATGGCTACAAGTGAGAGTTTTAAGGATTTTGTGTTAGAAAATCTT
AAAAGCGCATTAGAGGATAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 464; Mature: 463

Protein sequence:

>464_residues
MAYFNEKASKINHQYIIENPKVKDYLAKCEKIGQNLPLEVDSQAITSPISNIQNKFSSCIERVITIDGGYQEVNINDNFP
SQKLCYYNIGILMFSVKDLEVVERQQTINPSDIGKLENLERFSFVIPTQNIRLKNEDFISTFRKTLYEEVFLKNYLSEGN
EKSSFIHTIKWLIFKEYLDSNSKGKSSITFACPHCKKMQTFQKQTPNYLDEQNNFVKCSECENIIYITDCFDLHTLIDEI
NGATLIESYIMSAFEIILMLSMFRFLFEENTIQWLPKILFIKDGPLALFSRLDDFAFKIVRPFIQFLYAKSLNENISYIN
LVGLDKSGMFVEHLKNIESKIPLGSILLPNLDYMKKYITGNNTSVFGENTYFGIKMFVRKEKELSFVLDVAIPFDESITY
KDYIKQPKIEDFLSLKNILEVLFRLKCDLYEKSFIPIAMVNKLVSLSNIPSKKILTIFSQEKLC

Sequences:

>Translated_464_residues
MAYFNEKASKINHQYIIENPKVKDYLAKCEKIGQNLPLEVDSQAITSPISNIQNKFSSCIERVITIDGGYQEVNINDNFP
SQKLCYYNIGILMFSVKDLEVVERQQTINPSDIGKLENLERFSFVIPTQNIRLKNEDFISTFRKTLYEEVFLKNYLSEGN
EKSSFIHTIKWLIFKEYLDSNSKGKSSITFACPHCKKMQTFQKQTPNYLDEQNNFVKCSECENIIYITDCFDLHTLIDEI
NGATLIESYIMSAFEIILMLSMFRFLFEENTIQWLPKILFIKDGPLALFSRLDDFAFKIVRPFIQFLYAKSLNENISYIN
LVGLDKSGMFVEHLKNIESKIPLGSILLPNLDYMKKYITGNNTSVFGENTYFGIKMFVRKEKELSFVLDVAIPFDESITY
KDYIKQPKIEDFLSLKNILEVLFRLKCDLYEKSFIPIAMVNKLVSLSNIPSKKILTIFSQEKLC
>Mature_463_residues
AYFNEKASKINHQYIIENPKVKDYLAKCEKIGQNLPLEVDSQAITSPISNIQNKFSSCIERVITIDGGYQEVNINDNFPS
QKLCYYNIGILMFSVKDLEVVERQQTINPSDIGKLENLERFSFVIPTQNIRLKNEDFISTFRKTLYEEVFLKNYLSEGNE
KSSFIHTIKWLIFKEYLDSNSKGKSSITFACPHCKKMQTFQKQTPNYLDEQNNFVKCSECENIIYITDCFDLHTLIDEIN
GATLIESYIMSAFEIILMLSMFRFLFEENTIQWLPKILFIKDGPLALFSRLDDFAFKIVRPFIQFLYAKSLNENISYINL
VGLDKSGMFVEHLKNIESKIPLGSILLPNLDYMKKYITGNNTSVFGENTYFGIKMFVRKEKELSFVLDVAIPFDESITYK
DYIKQPKIEDFLSLKNILEVLFRLKCDLYEKSFIPIAMVNKLVSLSNIPSKKILTIFSQEKLC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53946; Mature: 53815

Theoretical pI: Translated: 6.38; Mature: 6.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYFNEKASKINHQYIIENPKVKDYLAKCEKIGQNLPLEVDSQAITSPISNIQNKFSSCI
CCCCCCHHHHCCCEEEECCCCHHHHHHHHHHHCCCCCCEECHHHHHHHHHHHHHHHHHHH
ERVITIDGGYQEVNINDNFPSQKLCYYNIGILMFSVKDLEVVERQQTINPSDIGKLENLE
HHHEECCCCEEEEECCCCCCCCCEEEEEEEEEEEECHHHHHHHHHHCCCHHHHHHHHCCC
RFSFVIPTQNIRLKNEDFISTFRKTLYEEVFLKNYLSEGNEKSSFIHTIKWLIFKEYLDS
HHEEEECCCCEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC
NSKGKSSITFACPHCKKMQTFQKQTPNYLDEQNNFVKCSECENIIYITDCFDLHTLIDEI
CCCCCCCEEEECCCHHHHHHHHHCCCCHHHCCCCEEEECCCCCEEEEECHHHHHHHHHHC
NGATLIESYIMSAFEIILMLSMFRFLFEENTIQWLPKILFIKDGPLALFSRLDDFAFKIV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCEEEEECCCHHHHHHHHHHHHHHHH
RPFIQFLYAKSLNENISYINLVGLDKSGMFVEHLKNIESKIPLGSILLPNLDYMKKYITG
HHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCEECCCHHHHHHHHCC
NNTSVFGENTYFGIKMFVRKEKELSFVLDVAIPFDESITYKDYIKQPKIEDFLSLKNILE
CCCEEECCCCEEEEHEEEECCCCCEEEEEEEECCCCCCCHHHHHCCCCHHHHHHHHHHHH
VLFRLKCDLYEKSFIPIAMVNKLVSLSNIPSKKILTIFSQEKLC
HHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHEEECCCCCCC
>Mature Secondary Structure 
AYFNEKASKINHQYIIENPKVKDYLAKCEKIGQNLPLEVDSQAITSPISNIQNKFSSCI
CCCCCHHHHCCCEEEECCCCHHHHHHHHHHHCCCCCCEECHHHHHHHHHHHHHHHHHHH
ERVITIDGGYQEVNINDNFPSQKLCYYNIGILMFSVKDLEVVERQQTINPSDIGKLENLE
HHHEECCCCEEEEECCCCCCCCCEEEEEEEEEEEECHHHHHHHHHHCCCHHHHHHHHCCC
RFSFVIPTQNIRLKNEDFISTFRKTLYEEVFLKNYLSEGNEKSSFIHTIKWLIFKEYLDS
HHEEEECCCCEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC
NSKGKSSITFACPHCKKMQTFQKQTPNYLDEQNNFVKCSECENIIYITDCFDLHTLIDEI
CCCCCCCEEEECCCHHHHHHHHHCCCCHHHCCCCEEEECCCCCEEEEECHHHHHHHHHHC
NGATLIESYIMSAFEIILMLSMFRFLFEENTIQWLPKILFIKDGPLALFSRLDDFAFKIV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCEEEEECCCHHHHHHHHHHHHHHHH
RPFIQFLYAKSLNENISYINLVGLDKSGMFVEHLKNIESKIPLGSILLPNLDYMKKYITG
HHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCEECCCHHHHHHHHCC
NNTSVFGENTYFGIKMFVRKEKELSFVLDVAIPFDESITYKDYIKQPKIEDFLSLKNILE
CCCEEECCCCEEEEHEEEECCCCCEEEEEEEECCCCCCCHHHHHCCCCHHHHHHHHHHHH
VLFRLKCDLYEKSFIPIAMVNKLVSLSNIPSKKILTIFSQEKLC
HHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA