Click here to switch to the map view.

The map label for this gene is yfcA [C]

Identifier: 32266526

GI number: 32266526

Start: 1005984

End: 1006652

Strand: Direct

Name: yfcA [C]

Synonym: HH1027

Alternate gene names: 32266526

Gene position: 1005984-1006652 (Clockwise)

Preceding gene: 32266524

Following gene: 32266527

Centisome position: 55.91

GC content: 42.15

Gene sequence:

>669_bases
ATGATAACTATGCCCTTATTACTTGTAAGCGGACTAAATCCCCTCCAAGCCTTAGCGACAAATAAGCTTCAAGCCTGTGT
AGGCTCATTCGTCAGCGCAGCACATTATTATCATCAAGGTTTGGTGGATATGAAAGAAAGTCGTGCGGTGATGATAATTG
CACTGCTCTTTGGAGCAGTGGGTGCGATTTTAGTGCAGTTTATAGAGATTGCTTTACTCTCAAAAATCTTGCCTTTTGTG
ATGATAGCAGTGGGTGCATATTTCTTACTCTCTCCAAACATTAGCGAGGAGGACAGAGCCAAAAATCCTCATAAAATCTT
TTTGTTTATAAGCATCGCAATAGCAGGATTATATGGAGGATTCTTAGGCATTGGGATTGGCTCTTTTATCTTAGCTCTGC
TTGTAAGTATTGGTGGTTATGGACTTAGCAAAGCCTTAGCGCATTCGCGTTGGATTGTTTTTAGTATCAACATCGCCTCT
ACTTTGTTTTTCATACTCGGAGGCAATGTGCTTTGGATTCTAGGCATTATTATGTGTGTGGGACAAATCATCGGTGCAAG
CTTTGGGGCACGCCTTGCAATAAAGCACGGAGCAAGGATTATCCGCCCGATTGTAATATGCGTGTGCTTTGCCCTCTCCA
CTCAATTACTTGTTAGGGAGTTTTTCTAG

Upstream 100 bases:

>100_bases
AACCCCTACATTTGAAGGCATAGCTCTGTATTTTTATCCTCTCTTCTTTATTGCTTCTATTGTAGGCGGGGTTGTAGGCT
CACTCTCTGGTGGAGCAGGA

Downstream 100 bases:

>100_bases
GATTCTAAAATCCTATTTCAAAAACGAGCGCGATAACTTCCTTTTGTGCAATGTTTTTATAAAGATTGGTATCAAAGCAA
AACTCTGGCGTGTATTTTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MITMPLLLVSGLNPLQALATNKLQACVGSFVSAAHYYHQGLVDMKESRAVMIIALLFGAVGAILVQFIEIALLSKILPFV
MIAVGAYFLLSPNISEEDRAKNPHKIFLFISIAIAGLYGGFLGIGIGSFILALLVSIGGYGLSKALAHSRWIVFSINIAS
TLFFILGGNVLWILGIIMCVGQIIGASFGARLAIKHGARIIRPIVICVCFALSTQLLVREFF

Sequences:

>Translated_222_residues
MITMPLLLVSGLNPLQALATNKLQACVGSFVSAAHYYHQGLVDMKESRAVMIIALLFGAVGAILVQFIEIALLSKILPFV
MIAVGAYFLLSPNISEEDRAKNPHKIFLFISIAIAGLYGGFLGIGIGSFILALLVSIGGYGLSKALAHSRWIVFSINIAS
TLFFILGGNVLWILGIIMCVGQIIGASFGARLAIKHGARIIRPIVICVCFALSTQLLVREFF
>Mature_222_residues
MITMPLLLVSGLNPLQALATNKLQACVGSFVSAAHYYHQGLVDMKESRAVMIIALLFGAVGAILVQFIEIALLSKILPFV
MIAVGAYFLLSPNISEEDRAKNPHKIFLFISIAIAGLYGGFLGIGIGSFILALLVSIGGYGLSKALAHSRWIVFSINIAS
TLFFILGGNVLWILGIIMCVGQIIGASFGARLAIKHGARIIRPIVICVCFALSTQLLVREFF

Specific function: Unknown

COG id: COG0730

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0721 family [H]

Homologues:

Organism=Escherichia coli, GI1788667, Length=218, Percent_Identity=38.0733944954128, Blast_Score=148, Evalue=3e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002781 [H]

Pfam domain/function: PF01925 DUF81 [H]

EC number: NA

Molecular weight: Translated: 23823; Mature: 23823

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITMPLLLVSGLNPLQALATNKLQACVGSFVSAAHYYHQGLVDMKESRAVMIIALLFGAV
CCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
GAILVQFIEIALLSKILPFVMIAVGAYFLLSPNISEEDRAKNPHKIFLFISIAIAGLYGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCEEHHHHHHHHHHHHHH
FLGIGIGSFILALLVSIGGYGLSKALAHSRWIVFSINIASTLFFILGGNVLWILGIIMCV
HHHHHHHHHHHHHHHHHCCCCHHHHHHHCCEEEEEEHHHHHHHHHHCCCHHHHHHHHHHH
GQIIGASFGARLAIKHGARIIRPIVICVCFALSTQLLVREFF
HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MITMPLLLVSGLNPLQALATNKLQACVGSFVSAAHYYHQGLVDMKESRAVMIIALLFGAV
CCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
GAILVQFIEIALLSKILPFVMIAVGAYFLLSPNISEEDRAKNPHKIFLFISIAIAGLYGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCEEHHHHHHHHHHHHHH
FLGIGIGSFILALLVSIGGYGLSKALAHSRWIVFSINIASTLFFILGGNVLWILGIIMCV
HHHHHHHHHHHHHHHHHCCCCHHHHHHHCCEEEEEEHHHHHHHHHHCCCHHHHHHHHHHH
GQIIGASFGARLAIKHGARIIRPIVICVCFALSTQLLVREFF
HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]