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The map label for this gene is 32266524

Identifier: 32266524

GI number: 32266524

Start: 1002152

End: 1004662

Strand: Direct

Name: 32266524

Synonym: HH1025

Alternate gene names: NA

Gene position: 1002152-1004662 (Clockwise)

Preceding gene: 32266522

Following gene: 32266526

Centisome position: 55.7

GC content: 36.36

Gene sequence:

>2511_bases
ATGACAAAAGAGTATTTTATCATTCTTAAAGGCAAGGATAAGAGCGCGGAGATTGAGTATTGCTGCCTTGAAAATGAGAA
TCTCAAAGTAGTATTTAAAAACAATCCGCAAACTTACACTTACCAAAAAGAAAATTTTGCGCTTGTAAAAAGAGCGACAA
GCTATAAGTTCTTTAACTACCTTAAAGAGCTTTGTGCTCTTTCAGAAATGCAAACACCAGAGGACAATTTAAATGTGTTG
CTCAAAGAATATGAGAGAATCCAAACTATCCCCAAACAATCTGCCTTGTCTATCTACCTCAATCCCTCATCGTTCAAGCA
AGATTCTATCAATGAATCGCCGCTTATTTTTCCCTTTGGCGCAAACAAATCCCAATACGAAGCGGTGCAAAATGCAATGG
GTAGCCAAATAAGCGTTATTGAGGGACCACCGGGCACAGGCAAAACACAGACGATTTTAAATATCATCGCAAATCTTATC
TGCCAAAACAAAACTATCGCAGTACTCTCTAATAACAACTCCGCTACGCAAAATGTTTTTGAAAAGCTTGAGGGCTATGG
GTTTGGATTTGTTTGTGCGACTTTGGGCAAAAAGGACAATAAAGAAAGCTTTATCGCTAACCAAAGTGGCACTTATCCCT
CTTTTGATATTCCTGCAACAGATGCGACAAAGCTTAAAGCCGAGCTTGTCTGCCTTAATCAAAAGGCATTAGAGAGTTTT
CATCTTACTAACGAATTAGCCAAGCAAAAGACATTTTTAAACGCGCTAAGATTAGAATATGAATATTTCAAAGCGCAAGA
GAACATCTCGCCTTTAGCAATCAAAAACTTTACAAAATTAACAAGTGATAAGATTCTTAAAGCCAAAGTGCAGATAGAAC
AGATCCAAAAACTCTCCTTTTGGTTAAAACTCAAACTTGTTTTTTTAGACAAAGTGGGGGATTTTAGATTCTATAAATCT
CCTAAAAAAGAGATTTTGCATACATTAGATTCTTATTATTATATCCTTAAAGATATGGAACTTTCAAAATCTATTGAAAA
GCTCCAATCCGATCTCCCATCTTTGCAGCAAGAAAATCCCGTACAAAAGCTCAAAGTTTGTTCCTTGCTTTTATTCAAGT
CTTACCTTAGGGCAAAATACCAAAACAAACAACAAAGAGTGCGATTTGAACTTTTTGATTTAAACCAAAACGCACCCGCC
ATCTTGCAAGAATATCCCGTGATTCTAAGCACTACACATTCTATCAAATCCTCGCTCAATCTTAAAGACACATTGTTTGA
TTATGTGATTATTGAAGAAGCTTCACAAGTGGATTTAGTTACAGGTTTTCTGGCATTAAGTAGCGCGAAAAACGCTATTA
TCGTGGGAGATACGAAGCAACTTCCTAATGTGATTGCCCAAGATAAAAAACCTCTCATTGAAACGCTCACACGAAAATAT
TGCATTCCTTTGCATTATGATTTTTTAGAGCAAAGTTTGCTAAGCTCTGTGATAGCAACATTGCCCAATGTGCCAAAAGT
AATGCTTAAAGAACATTATCGCTGCCACCCTAAAATCATTGGATTTTGCAATAAAAGATTCTATAACAATGAATTGATTA
TTTTAAGCGAAGATAAGGGTGAAAATGATGTAATACAGACATTTGTTACACAAAAGGGCAATCACGCAAGGGGGCATTAT
AACCAAAGAGAAATTGATGTAATAGTAAAAGAAGTTTTGCCACCCTTACAAGCAAATCTCACAAAGGAGCAAATTGGCAT
TATCTCGCCCTTTAGGAAGCAAAAAGCGCATTTGCAACATAATGTGAGTGGGATAGAAATAGACACGATTCACAAATATC
AAGGACGAGAAAAAGAGGCGATTATCCTAAGCACAGTAGAGAATGAAATCAGTGATTTTATTGATAATCCAAATTTGCTT
AATGTCGCTATAAGCCGTGCTAAGCGGTTTTTGCGAGTTGTCATCTCTGCGCAAATCTACCAAAGCAAAAGCCATTTAAA
AGATTTAATTGCCTATATGCAATACCATAATTTTGAAATCACACAAAGCAAAGTGAAATCTATCTTTGACCTGCTGTATA
AGGCAAATGCGGAAGCAAGGCGCAAATATCTTAAAGGCAAGAAAAAAATCTCCGCTTATGATTCTGAAAACCTTGCCTAT
CACGCGCTTAAAAATTGCATTAGCTCTTATGGGAACTTGGATATTGCTACACATATTCCACTATATAGAATCTTAAGCTC
TACTCAAGGCTTAAATGCACAAGAAATAAAGTTTATCCAAAGCTCAAGCCATATTGATTTGCTGATTTTTAACACGATGG
ATAAACTCCCTGTGCTTGCCATAGAAATAGATGGCTTTGCCTATCACAAGGAAGATTCTAGGCAAAGTAAAAGAGATGAG
TTGAAAAATGCGATTTTACAAAAGTGCAGCATTACACTGCTAAGGCTTAACACGATAGAAAGTGATGAAATTGTGCGAGT
AAAAGCGTATTTGGATAAGCTGCAAGGATAA

Upstream 100 bases:

>100_bases
ATAGCAAGTTTCCTTTAATAACCAGTCCAAAAAAACACATTCACATCAAGCTCATTTAGAATTTGTTATAATACATATTT
ACCCAAAATAAAGAAGCACG

Downstream 100 bases:

>100_bases
AGCCGTGCGCTACCTACCCAAATATTTTGGCGCGATTAATTGGCAGTTTCCCCTAATAATTCGTCCAAGAAAACGCACTT
TTATTCGTATCAAGCTCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 836; Mature: 835

Protein sequence:

>836_residues
MTKEYFIILKGKDKSAEIEYCCLENENLKVVFKNNPQTYTYQKENFALVKRATSYKFFNYLKELCALSEMQTPEDNLNVL
LKEYERIQTIPKQSALSIYLNPSSFKQDSINESPLIFPFGANKSQYEAVQNAMGSQISVIEGPPGTGKTQTILNIIANLI
CQNKTIAVLSNNNSATQNVFEKLEGYGFGFVCATLGKKDNKESFIANQSGTYPSFDIPATDATKLKAELVCLNQKALESF
HLTNELAKQKTFLNALRLEYEYFKAQENISPLAIKNFTKLTSDKILKAKVQIEQIQKLSFWLKLKLVFLDKVGDFRFYKS
PKKEILHTLDSYYYILKDMELSKSIEKLQSDLPSLQQENPVQKLKVCSLLLFKSYLRAKYQNKQQRVRFELFDLNQNAPA
ILQEYPVILSTTHSIKSSLNLKDTLFDYVIIEEASQVDLVTGFLALSSAKNAIIVGDTKQLPNVIAQDKKPLIETLTRKY
CIPLHYDFLEQSLLSSVIATLPNVPKVMLKEHYRCHPKIIGFCNKRFYNNELIILSEDKGENDVIQTFVTQKGNHARGHY
NQREIDVIVKEVLPPLQANLTKEQIGIISPFRKQKAHLQHNVSGIEIDTIHKYQGREKEAIILSTVENEISDFIDNPNLL
NVAISRAKRFLRVVISAQIYQSKSHLKDLIAYMQYHNFEITQSKVKSIFDLLYKANAEARRKYLKGKKKISAYDSENLAY
HALKNCISSYGNLDIATHIPLYRILSSTQGLNAQEIKFIQSSSHIDLLIFNTMDKLPVLAIEIDGFAYHKEDSRQSKRDE
LKNAILQKCSITLLRLNTIESDEIVRVKAYLDKLQG

Sequences:

>Translated_836_residues
MTKEYFIILKGKDKSAEIEYCCLENENLKVVFKNNPQTYTYQKENFALVKRATSYKFFNYLKELCALSEMQTPEDNLNVL
LKEYERIQTIPKQSALSIYLNPSSFKQDSINESPLIFPFGANKSQYEAVQNAMGSQISVIEGPPGTGKTQTILNIIANLI
CQNKTIAVLSNNNSATQNVFEKLEGYGFGFVCATLGKKDNKESFIANQSGTYPSFDIPATDATKLKAELVCLNQKALESF
HLTNELAKQKTFLNALRLEYEYFKAQENISPLAIKNFTKLTSDKILKAKVQIEQIQKLSFWLKLKLVFLDKVGDFRFYKS
PKKEILHTLDSYYYILKDMELSKSIEKLQSDLPSLQQENPVQKLKVCSLLLFKSYLRAKYQNKQQRVRFELFDLNQNAPA
ILQEYPVILSTTHSIKSSLNLKDTLFDYVIIEEASQVDLVTGFLALSSAKNAIIVGDTKQLPNVIAQDKKPLIETLTRKY
CIPLHYDFLEQSLLSSVIATLPNVPKVMLKEHYRCHPKIIGFCNKRFYNNELIILSEDKGENDVIQTFVTQKGNHARGHY
NQREIDVIVKEVLPPLQANLTKEQIGIISPFRKQKAHLQHNVSGIEIDTIHKYQGREKEAIILSTVENEISDFIDNPNLL
NVAISRAKRFLRVVISAQIYQSKSHLKDLIAYMQYHNFEITQSKVKSIFDLLYKANAEARRKYLKGKKKISAYDSENLAY
HALKNCISSYGNLDIATHIPLYRILSSTQGLNAQEIKFIQSSSHIDLLIFNTMDKLPVLAIEIDGFAYHKEDSRQSKRDE
LKNAILQKCSITLLRLNTIESDEIVRVKAYLDKLQG
>Mature_835_residues
TKEYFIILKGKDKSAEIEYCCLENENLKVVFKNNPQTYTYQKENFALVKRATSYKFFNYLKELCALSEMQTPEDNLNVLL
KEYERIQTIPKQSALSIYLNPSSFKQDSINESPLIFPFGANKSQYEAVQNAMGSQISVIEGPPGTGKTQTILNIIANLIC
QNKTIAVLSNNNSATQNVFEKLEGYGFGFVCATLGKKDNKESFIANQSGTYPSFDIPATDATKLKAELVCLNQKALESFH
LTNELAKQKTFLNALRLEYEYFKAQENISPLAIKNFTKLTSDKILKAKVQIEQIQKLSFWLKLKLVFLDKVGDFRFYKSP
KKEILHTLDSYYYILKDMELSKSIEKLQSDLPSLQQENPVQKLKVCSLLLFKSYLRAKYQNKQQRVRFELFDLNQNAPAI
LQEYPVILSTTHSIKSSLNLKDTLFDYVIIEEASQVDLVTGFLALSSAKNAIIVGDTKQLPNVIAQDKKPLIETLTRKYC
IPLHYDFLEQSLLSSVIATLPNVPKVMLKEHYRCHPKIIGFCNKRFYNNELIILSEDKGENDVIQTFVTQKGNHARGHYN
QREIDVIVKEVLPPLQANLTKEQIGIISPFRKQKAHLQHNVSGIEIDTIHKYQGREKEAIILSTVENEISDFIDNPNLLN
VAISRAKRFLRVVISAQIYQSKSHLKDLIAYMQYHNFEITQSKVKSIFDLLYKANAEARRKYLKGKKKISAYDSENLAYH
ALKNCISSYGNLDIATHIPLYRILSSTQGLNAQEIKFIQSSSHIDLLIFNTMDKLPVLAIEIDGFAYHKEDSRQSKRDEL
KNAILQKCSITLLRLNTIESDEIVRVKAYLDKLQG

Specific function: Unknown

COG id: COG1112

COG function: function code L; Superfamily I DNA and RNA helicases and helicase subunits

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DNA2/NAM7 helicase family [H]

Homologues:

Organism=Homo sapiens, GI254826809, Length=255, Percent_Identity=25.8823529411765, Blast_Score=85, Evalue=3e-16,
Organism=Homo sapiens, GI113722133, Length=277, Percent_Identity=26.3537906137184, Blast_Score=67, Evalue=9e-11,
Organism=Caenorhabditis elegans, GI17531513, Length=272, Percent_Identity=26.8382352941176, Blast_Score=75, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17531515, Length=272, Percent_Identity=26.8382352941176, Blast_Score=75, Evalue=1e-13,
Organism=Saccharomyces cerevisiae, GI6322835, Length=282, Percent_Identity=29.7872340425532, Blast_Score=86, Evalue=3e-17,
Organism=Drosophila melanogaster, GI45553113, Length=359, Percent_Identity=24.2339832869081, Blast_Score=74, Evalue=5e-13,
Organism=Drosophila melanogaster, GI18859757, Length=270, Percent_Identity=27.4074074074074, Blast_Score=69, Evalue=1e-11,
Organism=Drosophila melanogaster, GI62471854, Length=302, Percent_Identity=23.5099337748344, Blast_Score=68, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24656854, Length=302, Percent_Identity=23.5099337748344, Blast_Score=68, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR004483 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 95642; Mature: 95511

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKEYFIILKGKDKSAEIEYCCLENENLKVVFKNNPQTYTYQKENFALVKRATSYKFFNY
CCCEEEEEEECCCCCCCEEEEEECCCCEEEEECCCCCEEEEECCCCEEHHHHHHHHHHHH
LKELCALSEMQTPEDNLNVLLKEYERIQTIPKQSALSIYLNPSSFKQDSINESPLIFPFG
HHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEC
ANKSQYEAVQNAMGSQISVIEGPPGTGKTQTILNIIANLICQNKTIAVLSNNNSATQNVF
CCHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHH
EKLEGYGFGFVCATLGKKDNKESFIANQSGTYPSFDIPATDATKLKAELVCLNQKALESF
HHHHCCCCEEEEEECCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHEECCHHHHHHH
HLTNELAKQKTFLNALRLEYEYFKAQENISPLAIKNFTKLTSDKILKAKVQIEQIQKLSF
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WLKLKLVFLDKVGDFRFYKSPKKEILHTLDSYYYILKDMELSKSIEKLQSDLPSLQQENP
HHHEEEEEEECCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCH
VQKLKVCSLLLFKSYLRAKYQNKQQRVRFELFDLNQNAPAILQEYPVILSTTHSIKSSLN
HHHHHHHHHHHHHHHHHHHHCCHHHHEEEEEEECCCCCCHHHHHCCHHEEECHHHHHCCC
LKDTLFDYVIIEEASQVDLVTGFLALSSAKNAIIVGDTKQLPNVIAQDKKPLIETLTRKY
HHHHHHHHHEECCCCCHHHHHHHHHHHCCCCEEEECCCHHHHHHHHCCCCHHHHHHHHHH
CIPLHYDFLEQSLLSSVIATLPNVPKVMLKEHYRCHPKIIGFCNKRFYNNELIILSEDKG
CCEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHEEECCEEEEEECCCC
ENDVIQTFVTQKGNHARGHYNQREIDVIVKEVLPPLQANLTKEQIGIISPFRKQKAHLQH
CHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCHHHCCCCHHHHCCCCCHHHHHHHHHH
NVSGIEIDTIHKYQGREKEAIILSTVENEISDFIDNPNLLNVAISRAKRFLRVVISAQIY
CCCCEEEEEEHHCCCCCCCEEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
QSKSHLKDLIAYMQYHNFEITQSKVKSIFDLLYKANAEARRKYLKGKKKISAYDSENLAY
HHHHHHHHHHHHHHHCCCEECHHHHHHHHHHHHHCCHHHHHHHHCCCHHCCCCCCCCHHH
HALKNCISSYGNLDIATHIPLYRILSSTQGLNAQEIKFIQSSSHIDLLIFNTMDKLPVLA
HHHHHHHHHCCCCEEECCCHHHHHHHHCCCCCHHHHHEEECCCCEEEEEEECCCCCEEEE
IEIDGFAYHKEDSRQSKRDELKNAILQKCSITLLRLNTIESDEIVRVKAYLDKLQG
EEECCEEECCCHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCEEHHHHHHHHHCC
>Mature Secondary Structure 
TKEYFIILKGKDKSAEIEYCCLENENLKVVFKNNPQTYTYQKENFALVKRATSYKFFNY
CCEEEEEEECCCCCCCEEEEEECCCCEEEEECCCCCEEEEECCCCEEHHHHHHHHHHHH
LKELCALSEMQTPEDNLNVLLKEYERIQTIPKQSALSIYLNPSSFKQDSINESPLIFPFG
HHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEC
ANKSQYEAVQNAMGSQISVIEGPPGTGKTQTILNIIANLICQNKTIAVLSNNNSATQNVF
CCHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHH
EKLEGYGFGFVCATLGKKDNKESFIANQSGTYPSFDIPATDATKLKAELVCLNQKALESF
HHHHCCCCEEEEEECCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHEECCHHHHHHH
HLTNELAKQKTFLNALRLEYEYFKAQENISPLAIKNFTKLTSDKILKAKVQIEQIQKLSF
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WLKLKLVFLDKVGDFRFYKSPKKEILHTLDSYYYILKDMELSKSIEKLQSDLPSLQQENP
HHHEEEEEEECCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCH
VQKLKVCSLLLFKSYLRAKYQNKQQRVRFELFDLNQNAPAILQEYPVILSTTHSIKSSLN
HHHHHHHHHHHHHHHHHHHHCCHHHHEEEEEEECCCCCCHHHHHCCHHEEECHHHHHCCC
LKDTLFDYVIIEEASQVDLVTGFLALSSAKNAIIVGDTKQLPNVIAQDKKPLIETLTRKY
HHHHHHHHHEECCCCCHHHHHHHHHHHCCCCEEEECCCHHHHHHHHCCCCHHHHHHHHHH
CIPLHYDFLEQSLLSSVIATLPNVPKVMLKEHYRCHPKIIGFCNKRFYNNELIILSEDKG
CCEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHEEECCEEEEEECCCC
ENDVIQTFVTQKGNHARGHYNQREIDVIVKEVLPPLQANLTKEQIGIISPFRKQKAHLQH
CHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCHHHCCCCHHHHCCCCCHHHHHHHHHH
NVSGIEIDTIHKYQGREKEAIILSTVENEISDFIDNPNLLNVAISRAKRFLRVVISAQIY
CCCCEEEEEEHHCCCCCCCEEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
QSKSHLKDLIAYMQYHNFEITQSKVKSIFDLLYKANAEARRKYLKGKKKISAYDSENLAY
HHHHHHHHHHHHHHHCCCEECHHHHHHHHHHHHHCCHHHHHHHHCCCHHCCCCCCCCHHH
HALKNCISSYGNLDIATHIPLYRILSSTQGLNAQEIKFIQSSSHIDLLIFNTMDKLPVLA
HHHHHHHHHCCCCEEECCCHHHHHHHHCCCCCHHHHHEEECCCCEEEEEEECCCCCEEEE
IEIDGFAYHKEDSRQSKRDELKNAILQKCSITLLRLNTIESDEIVRVKAYLDKLQG
EEECCEEECCCHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCEEHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]