| Definition | Helicobacter hepaticus ATCC 51449 chromosome, complete genome. |
|---|---|
| Accession | NC_004917 |
| Length | 1,799,146 |
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The map label for this gene is 32266498
Identifier: 32266498
GI number: 32266498
Start: 976341
End: 978386
Strand: Direct
Name: 32266498
Synonym: HH0999
Alternate gene names: NA
Gene position: 976341-978386 (Clockwise)
Preceding gene: 32266497
Following gene: 32266501
Centisome position: 54.27
GC content: 34.56
Gene sequence:
>2046_bases ATGAAAAAAACTATTTTATGGATACTGGGCGTTATTCTTGCATTAATAGTGATTATTTTATGCGTGCTTTTTACACCACC AGGTAATGCTCTGCTTAAGCCCATTATACAAGGGCAAATTGATAAATACGCACCTATTAAGCTTAATTTAGATACATTCT CACTTGGATTCTCAAGTATAGATGTGCAAATCAATCATAACGATGATATTAAAATAACACTCAATGGTGATTTCTCACTT TTTTCTCAAACACTTGACCTTGCACTCAAGGTTGATGCAAAAGATATTTCTGTGCTTGGAGAGATGGTAGATACACCTCT GCAAGGTTCATTTGTTATCAATACTACTGCGAAAGGCTCATTTGATAACCTTGAAATTAACACGACAAGCGATATCGCAA AATCCTTTACAGATATTCGTGTGCTTTTACAAGATTATACACCTACTTCAATTCTTGCTCACATTAAAGATGCACAAATT AAAGAATTTCTCGCTATGGCAGGAATGAAGCCCTATGCAAATGGCTCACTTAACCTTGAAGCTGATATTAAAGGCGATAC AAATATGAATTTCAATGGAAATGCTTTACTTAGTATTGCTCAAGGATTAGTTGATAGTGCGCTTATTAAAAAAGATTTTG AAGTTGATGTGCCAAAAACGACTTTTCTTATCACACTCAATGCTCTCTTCGATATGAACAAACTCAACCACGACTTTAAT TTCAATGCAAATATTGGTAATATCCACTCAAAAGGGCAAACATTTATCAAAGAATTGAGCACAGATAGCACTTATGATGT ACAGCTAAGTGATTTGTCTGCTTTTACACCATTAGCAGGTATGCCTATACGCGGTAGCTTTAACACCAAAGGCACAATTA AGGGTGATATGAAACTCTTAAACATTGATGGAAATTCTGATGTTGCAAGCTCTGATACTCTTTATAAAGCTACACTTAAA GATTTATCGCCAGAATCTGCGCAGGCTCATATCAAAAATCTTCGCCTTGACACACTTTTATGGATGATTCATATGCCACG TTATGCTACGATGCATCTTAATGCTGATTCTCTTGTAAATGATTTGGATAAAGGTATTTCTACCAAAACAACACTTACGC TTTCTGGCACAACAAATAATGCAGTAATGAAACAAGAAATGGATATGGATATGCCAAATACGAATTTCACGCTTAAATCC AACATAATTCTTGATAAGGGCGTAGGTGAAGCAAACTCCACCTTAGATTCTGATATTGCTCAAGTTAAACTCGCAAAAAC ACAAATTAACCTTAATAACGTTGCCTTTGAAGCACCTTATGAAGCTATTATACCTAATCTTAAAAAACTTAAATTTCTCA CAGGCATAGAGCTTGCTGGAGATTTTAAAGCAAAAGGTATAGCCAAATTCAAAGACACGCTTTATGCTGACTTTAACACA CAATCACTTGGTGGCAGCATTGATGCCAAACTTGATAATAATAAGCTCACAGCCTCTCTCAAGGATATTAATACGCTCAA ACTTCTTACTATGGCACAAGTTAAGCCTGTATTTAGCTCTAATATGAACGGGAATCTCAATTATGATACACTCATACAAA AAGGCACACTCAAAGCAGTTATAAGCAATGGAAAGCTTATGCCAAACCAAATTACCGAACTTGCAGAAAAATATCTTAAA ACAGATATTACTAAGGAAGCCTATGAAGATGCGGGATTAGATGCTATTATTGATAAAAATATTATTACTGCAGATATTGG ATTAAAAAGCCATAATACAGCCATTTTTGCAAAAGGTGCGAGTATTAATACAGACAAGGGCACAATTAATGCCGATTTCA AGTTTCAAATCAAAGATAAATATATTTATCTTAAAGCACGAAATAGCCTTGAATCTCCTACAATTAGCATTGATGCAAAT GAACTCATTAAAGCTGAAGCAGGCAAAGCTATTACCAAAGGTGCAGAAAAAGCTATTGATAAATATATTAAAGATGATAA AGTTAAAGAGGGCGCACAAAAGCTCCTTAACAATCTTTTCAAATAA
Upstream 100 bases:
>100_bases AATTATCGCAAGTAGAAAAAGAGTGCTTGATATGCCCCATTTATAATTTTTTTTTATAATTTTACAAATTTGTATCACCA TTGATAAAGGGGGAAAATAA
Downstream 100 bases:
>100_bases TCAAAATGAATTTAAAAGAAAGCATATTAAGTCTTTTGCCATAAGCTTTTTTGTTGCTACAATCGTGTCATTTATCATAA CATTTGTGTATTTACAATTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 681; Mature: 681
Protein sequence:
>681_residues MKKTILWILGVILALIVIILCVLFTPPGNALLKPIIQGQIDKYAPIKLNLDTFSLGFSSIDVQINHNDDIKITLNGDFSL FSQTLDLALKVDAKDISVLGEMVDTPLQGSFVINTTAKGSFDNLEINTTSDIAKSFTDIRVLLQDYTPTSILAHIKDAQI KEFLAMAGMKPYANGSLNLEADIKGDTNMNFNGNALLSIAQGLVDSALIKKDFEVDVPKTTFLITLNALFDMNKLNHDFN FNANIGNIHSKGQTFIKELSTDSTYDVQLSDLSAFTPLAGMPIRGSFNTKGTIKGDMKLLNIDGNSDVASSDTLYKATLK DLSPESAQAHIKNLRLDTLLWMIHMPRYATMHLNADSLVNDLDKGISTKTTLTLSGTTNNAVMKQEMDMDMPNTNFTLKS NIILDKGVGEANSTLDSDIAQVKLAKTQINLNNVAFEAPYEAIIPNLKKLKFLTGIELAGDFKAKGIAKFKDTLYADFNT QSLGGSIDAKLDNNKLTASLKDINTLKLLTMAQVKPVFSSNMNGNLNYDTLIQKGTLKAVISNGKLMPNQITELAEKYLK TDITKEAYEDAGLDAIIDKNIITADIGLKSHNTAIFAKGASINTDKGTINADFKFQIKDKYIYLKARNSLESPTISIDAN ELIKAEAGKAITKGAEKAIDKYIKDDKVKEGAQKLLNNLFK
Sequences:
>Translated_681_residues MKKTILWILGVILALIVIILCVLFTPPGNALLKPIIQGQIDKYAPIKLNLDTFSLGFSSIDVQINHNDDIKITLNGDFSL FSQTLDLALKVDAKDISVLGEMVDTPLQGSFVINTTAKGSFDNLEINTTSDIAKSFTDIRVLLQDYTPTSILAHIKDAQI KEFLAMAGMKPYANGSLNLEADIKGDTNMNFNGNALLSIAQGLVDSALIKKDFEVDVPKTTFLITLNALFDMNKLNHDFN FNANIGNIHSKGQTFIKELSTDSTYDVQLSDLSAFTPLAGMPIRGSFNTKGTIKGDMKLLNIDGNSDVASSDTLYKATLK DLSPESAQAHIKNLRLDTLLWMIHMPRYATMHLNADSLVNDLDKGISTKTTLTLSGTTNNAVMKQEMDMDMPNTNFTLKS NIILDKGVGEANSTLDSDIAQVKLAKTQINLNNVAFEAPYEAIIPNLKKLKFLTGIELAGDFKAKGIAKFKDTLYADFNT QSLGGSIDAKLDNNKLTASLKDINTLKLLTMAQVKPVFSSNMNGNLNYDTLIQKGTLKAVISNGKLMPNQITELAEKYLK TDITKEAYEDAGLDAIIDKNIITADIGLKSHNTAIFAKGASINTDKGTINADFKFQIKDKYIYLKARNSLESPTISIDAN ELIKAEAGKAITKGAEKAIDKYIKDDKVKEGAQKLLNNLFK >Mature_681_residues MKKTILWILGVILALIVIILCVLFTPPGNALLKPIIQGQIDKYAPIKLNLDTFSLGFSSIDVQINHNDDIKITLNGDFSL FSQTLDLALKVDAKDISVLGEMVDTPLQGSFVINTTAKGSFDNLEINTTSDIAKSFTDIRVLLQDYTPTSILAHIKDAQI KEFLAMAGMKPYANGSLNLEADIKGDTNMNFNGNALLSIAQGLVDSALIKKDFEVDVPKTTFLITLNALFDMNKLNHDFN FNANIGNIHSKGQTFIKELSTDSTYDVQLSDLSAFTPLAGMPIRGSFNTKGTIKGDMKLLNIDGNSDVASSDTLYKATLK DLSPESAQAHIKNLRLDTLLWMIHMPRYATMHLNADSLVNDLDKGISTKTTLTLSGTTNNAVMKQEMDMDMPNTNFTLKS NIILDKGVGEANSTLDSDIAQVKLAKTQINLNNVAFEAPYEAIIPNLKKLKFLTGIELAGDFKAKGIAKFKDTLYADFNT QSLGGSIDAKLDNNKLTASLKDINTLKLLTMAQVKPVFSSNMNGNLNYDTLIQKGTLKAVISNGKLMPNQITELAEKYLK TDITKEAYEDAGLDAIIDKNIITADIGLKSHNTAIFAKGASINTDKGTINADFKFQIKDKYIYLKARNSLESPTISIDAN ELIKAEAGKAITKGAEKAIDKYIKDDKVKEGAQKLLNNLFK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 74483; Mature: 74483
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKTILWILGVILALIVIILCVLFTPPGNALLKPIIQGQIDKYAPIKLNLDTFSLGFSSI CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCEEEECCEEEECCEEE DVQINHNDDIKITLNGDFSLFSQTLDLALKVDAKDISVLGEMVDTPLQGSFVINTTAKGS EEEECCCCCEEEEECCCHHHHHHHEEEEEEECCHHHHHHHHHHCCCCCCCEEEEECCCCC FDNLEINTTSDIAKSFTDIRVLLQDYTPTSILAHIKDAQIKEFLAMAGMKPYANGSLNLE CCCEEEECHHHHHHHHHHHHHHHHCCCCHHHHHHHCHHHHHHHHHHCCCCCCCCCCEEEE ADIKGDTNMNFNGNALLSIAQGLVDSALIKKDFEVDVPKTTFLITLNALFDMNKLNHDFN EEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEHHHHHHHCCCCCC FNANIGNIHSKGQTFIKELSTDSTYDVQLSDLSAFTPLAGMPIRGSFNTKGTIKGDMKLL CCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEECEEEE NIDGNSDVASSDTLYKATLKDLSPESAQAHIKNLRLDTLLWMIHMPRYATMHLNADSLVN EECCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHH DLDKGISTKTTLTLSGTTNNAVMKQEMDMDMPNTNFTLKSNIILDKGVGEANSTLDSDIA HHHCCCCCEEEEEEECCCCCCHHHHHCCCCCCCCCEEEEECEEEECCCCCCCCCHHHHHH QVKLAKTQINLNNVAFEAPYEAIIPNLKKLKFLTGIELAGDFKAKGIAKFKDTLYADFNT HEEEEEEEEEECCEEEECCHHHHCCCHHHHHHHHCCEECCCCCCCCHHHHHHHEEECCCC QSLGGSIDAKLDNNKLTASLKDINTLKLLTMAQVKPVFSSNMNGNLNYDTLIQKGTLKAV CCCCCEEEEEECCCEEEEECCCCCEEEEEHHHHHCHHHHCCCCCCCCHHHHCCCCCEEEE ISNGKLMPNQITELAEKYLKTDITKEAYEDAGLDAIIDKNIITADIGLKSHNTAIFAKGA ECCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCEEECCCEEEEECCCCCCCCEEEEECC SINTDKGTINADFKFQIKDKYIYLKARNSLESPTISIDANELIKAEAGKAITKGAEKAID CCCCCCCEEECEEEEEEEEEEEEEEECCCCCCCEEEECHHHHHHHHCCCHHHHHHHHHHH KYIKDDKVKEGAQKLLNNLFK HHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKKTILWILGVILALIVIILCVLFTPPGNALLKPIIQGQIDKYAPIKLNLDTFSLGFSSI CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCEEEECCEEEECCEEE DVQINHNDDIKITLNGDFSLFSQTLDLALKVDAKDISVLGEMVDTPLQGSFVINTTAKGS EEEECCCCCEEEEECCCHHHHHHHEEEEEEECCHHHHHHHHHHCCCCCCCEEEEECCCCC FDNLEINTTSDIAKSFTDIRVLLQDYTPTSILAHIKDAQIKEFLAMAGMKPYANGSLNLE CCCEEEECHHHHHHHHHHHHHHHHCCCCHHHHHHHCHHHHHHHHHHCCCCCCCCCCEEEE ADIKGDTNMNFNGNALLSIAQGLVDSALIKKDFEVDVPKTTFLITLNALFDMNKLNHDFN EEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEHHHHHHHCCCCCC FNANIGNIHSKGQTFIKELSTDSTYDVQLSDLSAFTPLAGMPIRGSFNTKGTIKGDMKLL CCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEECEEEE NIDGNSDVASSDTLYKATLKDLSPESAQAHIKNLRLDTLLWMIHMPRYATMHLNADSLVN EECCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHH DLDKGISTKTTLTLSGTTNNAVMKQEMDMDMPNTNFTLKSNIILDKGVGEANSTLDSDIA HHHCCCCCEEEEEEECCCCCCHHHHHCCCCCCCCCEEEEECEEEECCCCCCCCCHHHHHH QVKLAKTQINLNNVAFEAPYEAIIPNLKKLKFLTGIELAGDFKAKGIAKFKDTLYADFNT HEEEEEEEEEECCEEEECCHHHHCCCHHHHHHHHCCEECCCCCCCCHHHHHHHEEECCCC QSLGGSIDAKLDNNKLTASLKDINTLKLLTMAQVKPVFSSNMNGNLNYDTLIQKGTLKAV CCCCCEEEEEECCCEEEEECCCCCEEEEEHHHHHCHHHHCCCCCCCCHHHHCCCCCEEEE ISNGKLMPNQITELAEKYLKTDITKEAYEDAGLDAIIDKNIITADIGLKSHNTAIFAKGA ECCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCEEECCCEEEEECCCCCCCCEEEEECC SINTDKGTINADFKFQIKDKYIYLKARNSLESPTISIDANELIKAEAGKAITKGAEKAID CCCCCCCEEECEEEEEEEEEEEEEEECCCCCCCEEEECHHHHHHHHCCCHHHHHHHHHHH KYIKDDKVKEGAQKLLNNLFK HHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA