| Definition | Helicobacter hepaticus ATCC 51449 chromosome, complete genome. |
|---|---|
| Accession | NC_004917 |
| Length | 1,799,146 |
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The map label for this gene is flgK
Identifier: 32266375
GI number: 32266375
Start: 852440
End: 854260
Strand: Direct
Name: flgK
Synonym: HH0876
Alternate gene names: 32266375
Gene position: 852440-854260 (Clockwise)
Preceding gene: 32266374
Following gene: 32266376
Centisome position: 47.38
GC content: 35.04
Gene sequence:
>1821_bases ATGGGCGGCATTCTTTCCTCACTTAACACTTCCTATACAGGCTTACAAGCTCATCAACTGATGGTTGATGTAACAGGCAA TAACATTTCAAATGCAAGTGATGAATTTTATAGCCGACAACGTGTGCTTGTGCGCCCTGAACGCCCACTTTATTACCAAG ATTATAATCTCGGCAGAGGTGTAAGTATTGAGACTATACAAAGAATCCACGATGAATTTGTGTTCAATCGTTATCGTAAA GCCGCTGAAGAAGCTCAATACTATGATACACATTTTACAACCTTGCGTGAAGCATCAGCCTTTTTCCCTGAAGTTGATGG TGTAGGAATCTATAATGATTTAGAAGAATACTTCAATGCGTGGAAAGACTTAGCAAAAAATTCCACTGACCCTGCCCAAA AACAAGTTTTAGCTAAAAATACTCAAGTGCTTAGCACTAATATTAAAGATACGCGTTCAAGACTCGTGCGTTTGCAGCAA AAAGTAAGTGAAGAACTTGAAGTAACAATCAATGAAGTCAATCGTATTGCAAAAGAAATCGCACATATTAATGGCAAACT CAAAGAAATGGAAGACCAGCGAGAGCTTAAGCAAGCAAATGAATTGCGTGATAGACGTGATGAGCTTGAATATAATCTTC AAACACTTATAGGGGCAAATGTTTTTAAAAATCATCTTGATTCTAATGCGTCTATTCACCCTAAATTAGCAGATTTTGAT GACGAATATGTATTAAATATTGGCTTTGGTTTTAATATTGTAGATGGTGCGATGTTCCACCCACTCGTGCTCAAAAAAGA TGATAATCATCTCAATCTTAATCGCGTATATTTTCAAGGTGATGATTTTAAAACCGTTGAAATTACTGATAAAATCGTTC AAGGCAAAGCTGGTTCTCTTATTAGTCTTTATAATTCAGGAGCTGAAGGCACACGAGTAGGAAAAATTCAAGATTATATT AATCATCTTGATATTTTTGCAAAAGGATTTATTGAAGCTACAAATGCTATTTACTCTCAAAGTGCAGCAACACAAATTCG TAGCGATAAACTTGATGTATGGAGCTTAAATGCTTTGGTAGATAGCAATTATAATATTAAAGAAGGAAGCTTTGATATTG TAGTATATAACACACAGGGAGAAGAAATCGCGCGTAAAACAATTAATATTGATAGAATCACTACTATGAATGATGTGGTA AGAGCTATTAATGAAAATACTGATGATAATAAAGATAACAACGCACTCAATGATGTTGATGATTATTTTCGTGCATATTA TGATAATGGCGCAAGAGAATTTAATATTCTCGCCAAGAATCCTTCTCAAGGACTATATATAGCCATTCAAGATAAAGGCA GCAATTTTACAGGCGCATTTGGTTTAAATAAATTTCTTGATGGAGATGATGCGCATAATATCGCTCTTAATCAAGAATAT GTCAAAGATGCTACACTCATACGCCCTTGGCTCACCCCTGTAAATGGAAACTTTGAAGTAGCGAATATGATGCAACAGCT TCAATATGATGATGTAGATTTCTATATTAATAAATATGAAAAAAAACAAATGAGAATCCCTGAGTATTTTCAGTTCCTGG CTGGACGCGTAGCAAATCAAACTGAAGCTACCCAACGCACAAAAGAAACAAAAGATGCTGTGCTTTCTGCTGTCAAAAAA GAACATTTAGCTATTTCGCAAGTAAGTCTTGATGAGGAAATGGTAAATCTTATTAAATTTCAAGGTGGTTATGCAGCAAA TGCTAAAGTGATTACAACTATTGATAGAATGATAGAGACCCTACTTGGTATTAAGCAATAA
Upstream 100 bases:
>100_bases ATAATTCGCTTATCCAAAGAGTAATACCTCACGAAAACAATGGCTATGAACATCACCGACCTCAAAGCCATTTACTTAAA ACTCAAGCTTAGGACAACTA
Downstream 100 bases:
>100_bases AATGCTAAAGATTCTAAAAGATAGTCTTAATGATTTTTTTACCCTAAAGATTATAAATCTTATTTGGGTGCCTTTAATCT TGAATCTTTTGCTTATAGGT
Product: flagellar hook-associated protein FlgK
Products: NA
Alternate protein names: HAP1 [H]
Number of amino acids: Translated: 606; Mature: 605
Protein sequence:
>606_residues MGGILSSLNTSYTGLQAHQLMVDVTGNNISNASDEFYSRQRVLVRPERPLYYQDYNLGRGVSIETIQRIHDEFVFNRYRK AAEEAQYYDTHFTTLREASAFFPEVDGVGIYNDLEEYFNAWKDLAKNSTDPAQKQVLAKNTQVLSTNIKDTRSRLVRLQQ KVSEELEVTINEVNRIAKEIAHINGKLKEMEDQRELKQANELRDRRDELEYNLQTLIGANVFKNHLDSNASIHPKLADFD DEYVLNIGFGFNIVDGAMFHPLVLKKDDNHLNLNRVYFQGDDFKTVEITDKIVQGKAGSLISLYNSGAEGTRVGKIQDYI NHLDIFAKGFIEATNAIYSQSAATQIRSDKLDVWSLNALVDSNYNIKEGSFDIVVYNTQGEEIARKTINIDRITTMNDVV RAINENTDDNKDNNALNDVDDYFRAYYDNGAREFNILAKNPSQGLYIAIQDKGSNFTGAFGLNKFLDGDDAHNIALNQEY VKDATLIRPWLTPVNGNFEVANMMQQLQYDDVDFYINKYEKKQMRIPEYFQFLAGRVANQTEATQRTKETKDAVLSAVKK EHLAISQVSLDEEMVNLIKFQGGYAANAKVITTIDRMIETLLGIKQ
Sequences:
>Translated_606_residues MGGILSSLNTSYTGLQAHQLMVDVTGNNISNASDEFYSRQRVLVRPERPLYYQDYNLGRGVSIETIQRIHDEFVFNRYRK AAEEAQYYDTHFTTLREASAFFPEVDGVGIYNDLEEYFNAWKDLAKNSTDPAQKQVLAKNTQVLSTNIKDTRSRLVRLQQ KVSEELEVTINEVNRIAKEIAHINGKLKEMEDQRELKQANELRDRRDELEYNLQTLIGANVFKNHLDSNASIHPKLADFD DEYVLNIGFGFNIVDGAMFHPLVLKKDDNHLNLNRVYFQGDDFKTVEITDKIVQGKAGSLISLYNSGAEGTRVGKIQDYI NHLDIFAKGFIEATNAIYSQSAATQIRSDKLDVWSLNALVDSNYNIKEGSFDIVVYNTQGEEIARKTINIDRITTMNDVV RAINENTDDNKDNNALNDVDDYFRAYYDNGAREFNILAKNPSQGLYIAIQDKGSNFTGAFGLNKFLDGDDAHNIALNQEY VKDATLIRPWLTPVNGNFEVANMMQQLQYDDVDFYINKYEKKQMRIPEYFQFLAGRVANQTEATQRTKETKDAVLSAVKK EHLAISQVSLDEEMVNLIKFQGGYAANAKVITTIDRMIETLLGIKQ >Mature_605_residues GGILSSLNTSYTGLQAHQLMVDVTGNNISNASDEFYSRQRVLVRPERPLYYQDYNLGRGVSIETIQRIHDEFVFNRYRKA AEEAQYYDTHFTTLREASAFFPEVDGVGIYNDLEEYFNAWKDLAKNSTDPAQKQVLAKNTQVLSTNIKDTRSRLVRLQQK VSEELEVTINEVNRIAKEIAHINGKLKEMEDQRELKQANELRDRRDELEYNLQTLIGANVFKNHLDSNASIHPKLADFDD EYVLNIGFGFNIVDGAMFHPLVLKKDDNHLNLNRVYFQGDDFKTVEITDKIVQGKAGSLISLYNSGAEGTRVGKIQDYIN HLDIFAKGFIEATNAIYSQSAATQIRSDKLDVWSLNALVDSNYNIKEGSFDIVVYNTQGEEIARKTINIDRITTMNDVVR AINENTDDNKDNNALNDVDDYFRAYYDNGAREFNILAKNPSQGLYIAIQDKGSNFTGAFGLNKFLDGDDAHNIALNQEYV KDATLIRPWLTPVNGNFEVANMMQQLQYDDVDFYINKYEKKQMRIPEYFQFLAGRVANQTEATQRTKETKDAVLSAVKKE HLAISQVSLDEEMVNLIKFQGGYAANAKVITTIDRMIETLLGIKQ
Specific function: Unknown
COG id: COG1256
COG function: function code N; Flagellar hook-associated protein
Gene ontology:
Cell location: Secreted. Bacterial flagellum (By similarity) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flagella basal body rod proteins family [H]
Homologues:
Organism=Escherichia coli, GI1787323, Length=333, Percent_Identity=22.2222222222222, Blast_Score=84, Evalue=2e-17,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010930 - InterPro: IPR001444 - InterPro: IPR019776 - InterPro: IPR002371 [H]
Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]
EC number: NA
Molecular weight: Translated: 69049; Mature: 68918
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGILSSLNTSYTGLQAHQLMVDVTGNNISNASDEFYSRQRVLVRPERPLYYQDYNLGRG CCCCHHHCCCCCCCCEEEEEEEEECCCCCCCCCHHHHHCCCEEECCCCCCEEECCCCCCC VSIETIQRIHDEFVFNRYRKAAEEAQYYDTHFTTLREASAFFPEVDGVGIYNDLEEYFNA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH WKDLAKNSTDPAQKQVLAKNTQVLSTNIKDTRSRLVRLQQKVSEELEVTINEVNRIAKEI HHHHHCCCCCHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AHINGKLKEMEDQRELKQANELRDRRDELEYNLQTLIGANVFKNHLDSNASIHPKLADFD HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC DEYVLNIGFGFNIVDGAMFHPLVLKKDDNHLNLNRVYFQGDDFKTVEITDKIVQGKAGSL CCEEEEECCCCEECCCHHHCCEEEECCCCEEEEEEEEEECCCEEEEEEHHHHHCCCCCCE ISLYNSGAEGTRVGKIQDYINHLDIFAKGFIEATNAIYSQSAATQIRSDKLDVWSLNALV EEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEE DSNYNIKEGSFDIVVYNTQGEEIARKTINIDRITTMNDVVRAINENTDDNKDNNALNDVD CCCCCCCCCCEEEEEECCCCHHHHHHHCCCHHCCHHHHHHHHHCCCCCCCCCCCCHHHHH DYFRAYYDNGAREFNILAKNPSQGLYIAIQDKGSNFTGAFGLNKFLDGDDAHNIALNQEY HHHHHHHCCCCEEEEEEEECCCCCEEEEEEECCCCCEEECCCHHHCCCCCCCEEEECHHH VKDATLIRPWLTPVNGNFEVANMMQQLQYDDVDFYINKYEKKQMRIPEYFQFLAGRVANQ HHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCH TEATQRTKETKDAVLSAVKKEHLAISQVSLDEEMVNLIKFQGGYAANAKVITTIDRMIET HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH LLGIKQ HHCCCC >Mature Secondary Structure GGILSSLNTSYTGLQAHQLMVDVTGNNISNASDEFYSRQRVLVRPERPLYYQDYNLGRG CCCHHHCCCCCCCCEEEEEEEEECCCCCCCCCHHHHHCCCEEECCCCCCEEECCCCCCC VSIETIQRIHDEFVFNRYRKAAEEAQYYDTHFTTLREASAFFPEVDGVGIYNDLEEYFNA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH WKDLAKNSTDPAQKQVLAKNTQVLSTNIKDTRSRLVRLQQKVSEELEVTINEVNRIAKEI HHHHHCCCCCHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AHINGKLKEMEDQRELKQANELRDRRDELEYNLQTLIGANVFKNHLDSNASIHPKLADFD HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC DEYVLNIGFGFNIVDGAMFHPLVLKKDDNHLNLNRVYFQGDDFKTVEITDKIVQGKAGSL CCEEEEECCCCEECCCHHHCCEEEECCCCEEEEEEEEEECCCEEEEEEHHHHHCCCCCCE ISLYNSGAEGTRVGKIQDYINHLDIFAKGFIEATNAIYSQSAATQIRSDKLDVWSLNALV EEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEE DSNYNIKEGSFDIVVYNTQGEEIARKTINIDRITTMNDVVRAINENTDDNKDNNALNDVD CCCCCCCCCCEEEEEECCCCHHHHHHHCCCHHCCHHHHHHHHHCCCCCCCCCCCCHHHHH DYFRAYYDNGAREFNILAKNPSQGLYIAIQDKGSNFTGAFGLNKFLDGDDAHNIALNQEY HHHHHHHCCCCEEEEEEEECCCCCEEEEEEECCCCCEEECCCHHHCCCCCCCEEEECHHH VKDATLIRPWLTPVNGNFEVANMMQQLQYDDVDFYINKYEKKQMRIPEYFQFLAGRVANQ HHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCH TEATQRTKETKDAVLSAVKKEHLAISQVSLDEEMVNLIKFQGGYAANAKVITTIDRMIET HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH LLGIKQ HHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377; 8045879 [H]