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The map label for this gene is ymdC [C]

Identifier: 32266187

GI number: 32266187

Start: 668814

End: 670376

Strand: Direct

Name: ymdC [C]

Synonym: HH0688

Alternate gene names: 32266187

Gene position: 668814-670376 (Clockwise)

Preceding gene: 32266186

Following gene: 32266191

Centisome position: 37.17

GC content: 34.48

Gene sequence:

>1563_bases
ATGCAATCTATTTATTCTGTCTTTTTTTCATCAACAAATATTGCTTTGCTTTGTCTTATATGTCTTTTTATCTTTGCTGG
TTGTTCTTCTATTGTCGCTTCTACCAAAGACATTAAAGACCCACTTGCACTTCAATCAAATCCAACACCTGTTTTTGACC
CTGTGCTCACTGCTATTGGTATGCCTTATCAGAATAAACTTAAACAAAACCCAACTATTACGGGAGGAATGCTCGTAAGT
GATGGGTTAGACGCATTTTTGCATCGCGCTTATCTCGCTCGTATGGCAGAAAAAAGCATTGTTTTACAAACTTATATTTA
TAAAAATGACCTCGCTTCACGTATTCTTATGCACGAGATTTGGCTTGCTGCACAAAGAGGGGTGATTGTTAAAATGCTCA
TTGATGATAATGGATTAGATTCTGATTTTTCAGATATTATTGCTCTTAATTCTCACCCAAATATTGAAGTAAAAATCTTC
AACCCCTATAAAAATCGCTCAAAAATCCTACGTTATCCAGAAATGGTGTTTGATTTTAATCGCATTAATCATCGTATGCA
CAATAAACTCTTTATTGTAGATGATATTGCCCTTATCATTGGTGGACGAAATATCGCAGATAATTATTTTGACCAAAATC
ATCATATTAATTTTGTTGATACCGATGTGCTTTTTATTGGTAATGTAGCAATGGAGGGCAAAAAAAATTTTTATGAATAT
TGGAATTTTCATCGCTCTATTCCTGTTTCACTTCTTAAATTCAAAACGCCACTTAAAAAACTTAAATCCTCTATGGAAAG
TCTTAAAGCGAATCCTGAGTGGGCACATTATGAGGAAAAAATCAATACCCTTATTAAAAAATACAAAAACAAATCTTTTG
AGGTATTTTGGGGCAACGCCGTGTTTATTGCTGATAAACCAGAAAAAATTCAAGACCCACAAGCGCCAAAACCCATTGCC
AAAGCACTTGCAAAGATTCTCAACTTTACATATAACAATCTTTATATTTCTGCCGCCTATTTTGTGCCAAGCAAAGAGGG
TATAAAACGTTTTAAAACCTTGATTGCTTCGGGTGTGGATATTAATATTCTTACAAATTCTCTTGCCTCTACGGATTCTC
TTGTCGTATATAGTGCGTGGGAACGTTATCGTGGCACTCTTATTAAAGAGGGTGCAAATATATATGAATATCAATATCAA
GGTAGAGGTAAATCAAAGTTACGTGATAAAATATCAAAGTCCAAAGCTTCTTTGCATAGTAAAAGCATTGTATTTGATGA
TTCTATTACTTGGATTGGGAGTTTTAATCTTGACCCACGTTCAACTCATCTCAATACTGAATGCGTTGTTATCTTTGATA
ATCCTAAATTTGCAAAAGTCTTTAAGGCTGATTTGATGACAGATATGGAAAGTGCGTGGCACGTATATAATAAAAATGGA
AAAACGCTTTGGGAGGGAGATGATGAAAGCAAGACAGAGATTTTTACCTATCCTCCTGATACAGGGATTTGGACAAGGAT
TCTAAAAACACTTGCAAAAATTCTCCCTGAAAGCCAAATTTAA

Upstream 100 bases:

>100_bases
CAAAATTGCTTATTTGCGCCGCAAAATGCTTAGTGTAGGTATGAAATAACACGATCTTTCTACCCTTTTACTTAAAAAGG
GTAGATTCTAAAGAAACATA

Downstream 100 bases:

>100_bases
AATCTCTGCATCTGCAATTAGGGCGCCAATCCGTTACTGAAACTTTTAAGACTTTTTTGAAAAACATTCTCTCCTGTATT
AATAGGTGAGGTAGAAAGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 520; Mature: 520

Protein sequence:

>520_residues
MQSIYSVFFSSTNIALLCLICLFIFAGCSSIVASTKDIKDPLALQSNPTPVFDPVLTAIGMPYQNKLKQNPTITGGMLVS
DGLDAFLHRAYLARMAEKSIVLQTYIYKNDLASRILMHEIWLAAQRGVIVKMLIDDNGLDSDFSDIIALNSHPNIEVKIF
NPYKNRSKILRYPEMVFDFNRINHRMHNKLFIVDDIALIIGGRNIADNYFDQNHHINFVDTDVLFIGNVAMEGKKNFYEY
WNFHRSIPVSLLKFKTPLKKLKSSMESLKANPEWAHYEEKINTLIKKYKNKSFEVFWGNAVFIADKPEKIQDPQAPKPIA
KALAKILNFTYNNLYISAAYFVPSKEGIKRFKTLIASGVDINILTNSLASTDSLVVYSAWERYRGTLIKEGANIYEYQYQ
GRGKSKLRDKISKSKASLHSKSIVFDDSITWIGSFNLDPRSTHLNTECVVIFDNPKFAKVFKADLMTDMESAWHVYNKNG
KTLWEGDDESKTEIFTYPPDTGIWTRILKTLAKILPESQI

Sequences:

>Translated_520_residues
MQSIYSVFFSSTNIALLCLICLFIFAGCSSIVASTKDIKDPLALQSNPTPVFDPVLTAIGMPYQNKLKQNPTITGGMLVS
DGLDAFLHRAYLARMAEKSIVLQTYIYKNDLASRILMHEIWLAAQRGVIVKMLIDDNGLDSDFSDIIALNSHPNIEVKIF
NPYKNRSKILRYPEMVFDFNRINHRMHNKLFIVDDIALIIGGRNIADNYFDQNHHINFVDTDVLFIGNVAMEGKKNFYEY
WNFHRSIPVSLLKFKTPLKKLKSSMESLKANPEWAHYEEKINTLIKKYKNKSFEVFWGNAVFIADKPEKIQDPQAPKPIA
KALAKILNFTYNNLYISAAYFVPSKEGIKRFKTLIASGVDINILTNSLASTDSLVVYSAWERYRGTLIKEGANIYEYQYQ
GRGKSKLRDKISKSKASLHSKSIVFDDSITWIGSFNLDPRSTHLNTECVVIFDNPKFAKVFKADLMTDMESAWHVYNKNG
KTLWEGDDESKTEIFTYPPDTGIWTRILKTLAKILPESQI
>Mature_520_residues
MQSIYSVFFSSTNIALLCLICLFIFAGCSSIVASTKDIKDPLALQSNPTPVFDPVLTAIGMPYQNKLKQNPTITGGMLVS
DGLDAFLHRAYLARMAEKSIVLQTYIYKNDLASRILMHEIWLAAQRGVIVKMLIDDNGLDSDFSDIIALNSHPNIEVKIF
NPYKNRSKILRYPEMVFDFNRINHRMHNKLFIVDDIALIIGGRNIADNYFDQNHHINFVDTDVLFIGNVAMEGKKNFYEY
WNFHRSIPVSLLKFKTPLKKLKSSMESLKANPEWAHYEEKINTLIKKYKNKSFEVFWGNAVFIADKPEKIQDPQAPKPIA
KALAKILNFTYNNLYISAAYFVPSKEGIKRFKTLIASGVDINILTNSLASTDSLVVYSAWERYRGTLIKEGANIYEYQYQ
GRGKSKLRDKISKSKASLHSKSIVFDDSITWIGSFNLDPRSTHLNTECVVIFDNPKFAKVFKADLMTDMESAWHVYNKNG
KTLWEGDDESKTEIFTYPPDTGIWTRILKTLAKILPESQI

Specific function: Unknown

COG id: COG1502

COG function: function code I; Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 PLD phosphodiesterase domains [H]

Homologues:

Organism=Escherichia coli, GI87081826, Length=485, Percent_Identity=33.1958762886598, Blast_Score=241, Evalue=6e-65,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001736 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59363; Mature: 59363

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: PS50035 PLD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSIYSVFFSSTNIALLCLICLFIFAGCSSIVASTKDIKDPLALQSNPTPVFDPVLTAIG
CCHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHCHHHCCCCCCCCCCCCCHHHHHHHHHC
MPYQNKLKQNPTITGGMLVSDGLDAFLHRAYLARMAEKSIVLQTYIYKNDLASRILMHEI
CCHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WLAAQRGVIVKMLIDDNGLDSDFSDIIALNSHPNIEVKIFNPYKNRSKILRYPEMVFDFN
HHHHCCCEEEEEEECCCCCCCCCHHEEEECCCCCEEEEEECCCCCCHHHHCCHHHHHHHH
RINHRMHNKLFIVDDIALIIGGRNIADNYFDQNHHINFVDTDVLFIGNVAMEGKKNFYEY
HHHHHHCCEEEEEEEEEEEECCCCHHHHHCCCCCCEEEEECCEEEEECEEECCCHHHHHH
WNFHRSIPVSLLKFKTPLKKLKSSMESLKANPEWAHYEEKINTLIKKYKNKSFEVFWGNA
HHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCE
VFIADKPEKIQDPQAPKPIAKALAKILNFTYNNLYISAAYFVPSKEGIKRFKTLIASGVD
EEEECCCHHCCCCCCCCHHHHHHHHHHHCHHCCEEEEEEEECCCHHHHHHHHHHHHCCCE
INILTNSLASTDSLVVYSAWERYRGTLIKEGANIYEYQYQGRGKSKLRDKISKSKASLHS
EEEEECCCCCCCCEEEEECHHHHCCCCEECCCCEEEEEECCCCHHHHHHHHHHHHHHHCC
KSIVFDDSITWIGSFNLDPRSTHLNTECVVIFDNPKFAKVFKADLMTDMESAWHVYNKNG
CCEEEECCEEEEEECCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHEEECCCC
KTLWEGDDESKTEIFTYPPDTGIWTRILKTLAKILPESQI
CEEECCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MQSIYSVFFSSTNIALLCLICLFIFAGCSSIVASTKDIKDPLALQSNPTPVFDPVLTAIG
CCHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHCHHHCCCCCCCCCCCCCHHHHHHHHHC
MPYQNKLKQNPTITGGMLVSDGLDAFLHRAYLARMAEKSIVLQTYIYKNDLASRILMHEI
CCHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WLAAQRGVIVKMLIDDNGLDSDFSDIIALNSHPNIEVKIFNPYKNRSKILRYPEMVFDFN
HHHHCCCEEEEEEECCCCCCCCCHHEEEECCCCCEEEEEECCCCCCHHHHCCHHHHHHHH
RINHRMHNKLFIVDDIALIIGGRNIADNYFDQNHHINFVDTDVLFIGNVAMEGKKNFYEY
HHHHHHCCEEEEEEEEEEEECCCCHHHHHCCCCCCEEEEECCEEEEECEEECCCHHHHHH
WNFHRSIPVSLLKFKTPLKKLKSSMESLKANPEWAHYEEKINTLIKKYKNKSFEVFWGNA
HHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCE
VFIADKPEKIQDPQAPKPIAKALAKILNFTYNNLYISAAYFVPSKEGIKRFKTLIASGVD
EEEECCCHHCCCCCCCCHHHHHHHHHHHCHHCCEEEEEEEECCCHHHHHHHHHHHHCCCE
INILTNSLASTDSLVVYSAWERYRGTLIKEGANIYEYQYQGRGKSKLRDKISKSKASLHS
EEEEECCCCCCCCEEEEECHHHHCCCCEECCCCEEEEEECCCCHHHHHHHHHHHHHHHCC
KSIVFDDSITWIGSFNLDPRSTHLNTECVVIFDNPKFAKVFKADLMTDMESAWHVYNKNG
CCEEEECCEEEEEECCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHEEECCCC
KTLWEGDDESKTEIFTYPPDTGIWTRILKTLAKILPESQI
CEEECCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]