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The map label for this gene is fliP

Identifier: 32266191

GI number: 32266191

Start: 672436

End: 673233

Strand: Direct

Name: fliP

Synonym: HH0692

Alternate gene names: 32266191

Gene position: 672436-673233 (Clockwise)

Preceding gene: 32266187

Following gene: 32266192

Centisome position: 37.38

GC content: 38.47

Gene sequence:

>798_bases
TTGAAAAAAATATTTTGCCTGCTTAGTTTATGTATGCTTTTTACTTATGCAGAGCCAAAACTTGAGCCCGCACTTCCTGC
ACCCTCTAGCATTCCATCTGTGCCATCAATCCCTAATAACCCTATCTTACCATCAGTAGATCTCTCCCTTACTGCACCAA
AAGAACCAACCGAACTTGTTGCCACTCTCAATATCGTGCTTATCATCACGCTTCTTGTCATTGCTCCATCGCTTGTGCTT
GTGATGACAAGCTTTACACGTATTGTCATTGTTTTTGCTTTTTTGCGCACTGCACTTGGCACACAGCAATCTCCCCCAAC
ACAAGTGCTTGTTAGCCTTGCTCTAATTTTGACATTTTTTATTATGGAACCTGTGGCAACCAAAAGCTATGAAGTGGGTA
TTAAACCTTATGCAGAAAAAAAAATCTCCTATGATGAAGCCTTTGAAAGAGCGATTGTACCTTTTAAAGATTTTATGATT
AAAAACACGCGTGAAAAAGATTTGGCTCTTTTTTTTAGAATCCGCCAACTTGAAAACCCTCAAAGTGTTAATGATGTGCC
CTTAACAGTGTTGCTTCCAGCATTTATGATTAGTGAGCTTAAAACTGCATTTTGGATTGGTTTTTTGCTTTATCTGCCTT
TTTTAGTTATTGATATGGTTATTAGCTCGGTGCTTATGGCAATGGGTATGATGATGTTGCCACCTGTAATGATTTCGTTG
CCTTTTAAGATTCTTGTTTTTATACTTGTTGATGGTTGGAATCTCCTCATAGGTAACCTTGTGCAAGGCTTTAAGTAG

Upstream 100 bases:

>100_bases
ATAAATTACTCCTTCATTTATATTGAATTGGCTTAATTTATATAATTTTAACACACTAAATCCTATAATACGCCCTTGAG
TTTCAATTTTGGAGTGATTT

Downstream 100 bases:

>100_bases
CTAGGTCTAGAATGAATTGTGAGCATTTTGGCATATGTGGAGGCTGCACAAATATACAAGATTATTCCACACAACTGCAG
GCAAAACACAATCTTACTTT

Product: flagellar biosynthesis protein FliP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MKKIFCLLSLCMLFTYAEPKLEPALPAPSSIPSVPSIPNNPILPSVDLSLTAPKEPTELVATLNIVLIITLLVIAPSLVL
VMTSFTRIVIVFAFLRTALGTQQSPPTQVLVSLALILTFFIMEPVATKSYEVGIKPYAEKKISYDEAFERAIVPFKDFMI
KNTREKDLALFFRIRQLENPQSVNDVPLTVLLPAFMISELKTAFWIGFLLYLPFLVIDMVISSVLMAMGMMMLPPVMISL
PFKILVFILVDGWNLLIGNLVQGFK

Sequences:

>Translated_265_residues
MKKIFCLLSLCMLFTYAEPKLEPALPAPSSIPSVPSIPNNPILPSVDLSLTAPKEPTELVATLNIVLIITLLVIAPSLVL
VMTSFTRIVIVFAFLRTALGTQQSPPTQVLVSLALILTFFIMEPVATKSYEVGIKPYAEKKISYDEAFERAIVPFKDFMI
KNTREKDLALFFRIRQLENPQSVNDVPLTVLLPAFMISELKTAFWIGFLLYLPFLVIDMVISSVLMAMGMMMLPPVMISL
PFKILVFILVDGWNLLIGNLVQGFK
>Mature_265_residues
MKKIFCLLSLCMLFTYAEPKLEPALPAPSSIPSVPSIPNNPILPSVDLSLTAPKEPTELVATLNIVLIITLLVIAPSLVL
VMTSFTRIVIVFAFLRTALGTQQSPPTQVLVSLALILTFFIMEPVATKSYEVGIKPYAEKKISYDEAFERAIVPFKDFMI
KNTREKDLALFFRIRQLENPQSVNDVPLTVLLPAFMISELKTAFWIGFLLYLPFLVIDMVISSVLMAMGMMMLPPVMISL
PFKILVFILVDGWNLLIGNLVQGFK

Specific function: Plays a role in the flagellum-specific transport system [H]

COG id: COG1338

COG function: function code NU; Flagellar biosynthesis pathway, component FliP

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliP/mopC/spaP family [H]

Homologues:

Organism=Escherichia coli, GI1788259, Length=237, Percent_Identity=49.789029535865, Blast_Score=226, Evalue=8e-61,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005837
- InterPro:   IPR005838 [H]

Pfam domain/function: PF00813 FliP [H]

EC number: NA

Molecular weight: Translated: 29553; Mature: 29553

Theoretical pI: Translated: 8.17; Mature: 8.17

Prosite motif: PS01061 FLIP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIFCLLSLCMLFTYAEPKLEPALPAPSSIPSVPSIPNNPILPSVDLSLTAPKEPTELV
CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHH
ATLNIVLIITLLVIAPSLVLVMTSFTRIVIVFAFLRTALGTQQSPPTQVLVSLALILTFF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
IMEPVATKSYEVGIKPYAEKKISYDEAFERAIVPFKDFMIKNTREKDLALFFRIRQLENP
HHHHHHCCCEECCCCCHHHHHCCHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHCCC
QSVNDVPLTVLLPAFMISELKTAFWIGFLLYLPFLVIDMVISSVLMAMGMMMLPPVMISL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PFKILVFILVDGWNLLIGNLVQGFK
HHHHHHHHHHCCHHHHHHHHHHCCC
>Mature Secondary Structure
MKKIFCLLSLCMLFTYAEPKLEPALPAPSSIPSVPSIPNNPILPSVDLSLTAPKEPTELV
CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHH
ATLNIVLIITLLVIAPSLVLVMTSFTRIVIVFAFLRTALGTQQSPPTQVLVSLALILTFF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
IMEPVATKSYEVGIKPYAEKKISYDEAFERAIVPFKDFMIKNTREKDLALFFRIRQLENP
HHHHHHCCCEECCCCCHHHHHCCHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHCCC
QSVNDVPLTVLLPAFMISELKTAFWIGFLLYLPFLVIDMVISSVLMAMGMMMLPPVMISL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PFKILVFILVDGWNLLIGNLVQGFK
HHHHHHHHHHCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1597417; 9384377 [H]