| Definition | Helicobacter hepaticus ATCC 51449 chromosome, complete genome. |
|---|---|
| Accession | NC_004917 |
| Length | 1,799,146 |
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The map label for this gene is fabH
Identifier: 32266180
GI number: 32266180
Start: 659856
End: 660854
Strand: Direct
Name: fabH
Synonym: HH0681
Alternate gene names: 32266180
Gene position: 659856-660854 (Clockwise)
Preceding gene: 32266179
Following gene: 32266181
Centisome position: 36.68
GC content: 38.64
Gene sequence:
>999_bases ATGGGCAAAATATATGCTTCACTTAAATCAATTGCTTCTTATATCCCTCCCACCTGCATAAGCAATGTTGATTTTGAAAA AACACTTGATACAAATGATGAGTGGATTACCAAACGCACAGGTATTAAAACGCGTTATTTTGCCTTGCCTTCACAACAAA CAAGTGACCTTGCTTATGAAGCAGGTAAAAAAGCAATAGAACGCGCAGGCATCGAACCAAAAGATATTGATGCAGTAATC GTAGCAACTCTAAGCCCTGATTATCTCACAATGCCTAGCACTGCTTGTATTACTTCCTTTAAACTCGGTATTGAAAATAA AGCCGCCTTTGATATTAGTGCGGCGTGTAGTGGATTTGTTTATCTTCTCTCTCTTGCTAAATCTTTTATAGAATCCGGCA CTTATAAGCAAATCCTCATCATTGGTGCAGAAAAAACAAGTTCTGTTCTTGATTTTAGCGATAGAAGCACTTGTGTTCTT TTTGGTGATGGGGCTGGAGCGTGTGTTATAGGTAGCACAAATGACGAGAAAGCAGCTATCTTGGGCGTGAATGTAAGTGC AAATGGACGATATCAAGACTTTCTTTGCACTCCACGTGTTCATGCAACCTTTGGCGCTACTCAAGCACAAGAAAAGCAAT CATTTATTCAAATGAAAGGCAATGAAACCTTTAAAGTTGCTGTGAAAACGCTTGTATCAGAAGTAAAAGAGATTCTAAAT ACCCATCACATAAACCCTCAAGATGTATCATTTTTTATTCCTCATCAAGCAAATTTACGTATTATTAATGCAGTGGGAGA GAATCTAAACTTCACTCCAGAACAAATCGTTGTAAGCATACAAAAATATGGTAATACTTCCGCAGCCTCTATTCCTATGG CAATGAATGACCTTTACGAAGAAAAAAAGCTTAAATATGGGGATTTAATGCTACTAGATGCCCTTGGTGGTGGGCTTACT TGGGGTTCAGCACTTGTGCACTTTGGTGGCACAAACTAG
Upstream 100 bases:
>100_bases TATTTATCAAGCGCTTAATGCCATAGAATCTAATATATGTTCCAAGCTCTCTGATGCTTTTGCAAATAAACCTTCGAGCG CTCAACAATAAGGATTCTCT
Downstream 100 bases:
>100_bases GCTTTTTAAATATTCTTTTGCCTTTCATTTTTTTTTTTTTTGTTAGAATGTCGCCAAAATATTTCAAAGGATATAACGCA ATGAAAGAGGCTTCTTTTTA
Product: 3-oxoacyl-(acyl carrier protein) synthase III
Products: NA
Alternate protein names: 3-oxoacyl-[acyl-carrier-protein] synthase III; Beta-ketoacyl-ACP synthase III; KAS III
Number of amino acids: Translated: 332; Mature: 331
Protein sequence:
>332_residues MGKIYASLKSIASYIPPTCISNVDFEKTLDTNDEWITKRTGIKTRYFALPSQQTSDLAYEAGKKAIERAGIEPKDIDAVI VATLSPDYLTMPSTACITSFKLGIENKAAFDISAACSGFVYLLSLAKSFIESGTYKQILIIGAEKTSSVLDFSDRSTCVL FGDGAGACVIGSTNDEKAAILGVNVSANGRYQDFLCTPRVHATFGATQAQEKQSFIQMKGNETFKVAVKTLVSEVKEILN THHINPQDVSFFIPHQANLRIINAVGENLNFTPEQIVVSIQKYGNTSAASIPMAMNDLYEEKKLKYGDLMLLDALGGGLT WGSALVHFGGTN
Sequences:
>Translated_332_residues MGKIYASLKSIASYIPPTCISNVDFEKTLDTNDEWITKRTGIKTRYFALPSQQTSDLAYEAGKKAIERAGIEPKDIDAVI VATLSPDYLTMPSTACITSFKLGIENKAAFDISAACSGFVYLLSLAKSFIESGTYKQILIIGAEKTSSVLDFSDRSTCVL FGDGAGACVIGSTNDEKAAILGVNVSANGRYQDFLCTPRVHATFGATQAQEKQSFIQMKGNETFKVAVKTLVSEVKEILN THHINPQDVSFFIPHQANLRIINAVGENLNFTPEQIVVSIQKYGNTSAASIPMAMNDLYEEKKLKYGDLMLLDALGGGLT WGSALVHFGGTN >Mature_331_residues GKIYASLKSIASYIPPTCISNVDFEKTLDTNDEWITKRTGIKTRYFALPSQQTSDLAYEAGKKAIERAGIEPKDIDAVIV ATLSPDYLTMPSTACITSFKLGIENKAAFDISAACSGFVYLLSLAKSFIESGTYKQILIIGAEKTSSVLDFSDRSTCVLF GDGAGACVIGSTNDEKAAILGVNVSANGRYQDFLCTPRVHATFGATQAQEKQSFIQMKGNETFKVAVKTLVSEVKEILNT HHINPQDVSFFIPHQANLRIINAVGENLNFTPEQIVVSIQKYGNTSAASIPMAMNDLYEEKKLKYGDLMLLDALGGGLTW GSALVHFGGTN
Specific function: Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the
COG id: COG0332
COG function: function code I; 3-oxoacyl-[acyl-carrier-protein] synthase III
Gene ontology:
Cell location: Cytoplasm (Probable)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the fabH family
Homologues:
Organism=Escherichia coli, GI1787333, Length=328, Percent_Identity=40.8536585365854, Blast_Score=267, Evalue=8e-73,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): FABH_HELHP (P59813)
Other databases:
- EMBL: AE017125 - RefSeq: NP_860212.1 - ProteinModelPortal: P59813 - SMR: P59813 - GeneID: 1493735 - GenomeReviews: AE017125_GR - KEGG: hhe:HH0681 - NMPDR: fig|235279.1.peg.681 - HOGENOM: HBG649927 - OMA: DAGISAN - ProtClustDB: PRK09352 - BioCyc: HHEP235279:HH_0681-MONOMER - BRENDA: 2.3.1.180 - GO: GO:0005737 - HAMAP: MF_01815 - InterPro: IPR013751 - InterPro: IPR013747 - InterPro: IPR004655 - InterPro: IPR016039 - InterPro: IPR016038 - Gene3D: G3DSA:3.40.47.10 - TIGRFAMs: TIGR00747
Pfam domain/function: PF08545 ACP_syn_III; PF08541 ACP_syn_III_C; SSF53901 Thiolase-like
EC number: =2.3.1.180
Molecular weight: Translated: 35943; Mature: 35812
Theoretical pI: Translated: 6.04; Mature: 6.04
Prosite motif: NA
Important sites: ACT_SITE 116-116 ACT_SITE 255-255 ACT_SITE 285-285
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKIYASLKSIASYIPPTCISNVDFEKTLDTNDEWITKRTGIKTRYFALPSQQTSDLAYE CCHHHHHHHHHHHHCCCHHHCCCCCHHCCCCCCHHEEHHCCCCEEEEECCCCCCHHHHHH AGKKAIERAGIEPKDIDAVIVATLSPDYLTMPSTACITSFKLGIENKAAFDISAACSGFV HHHHHHHHCCCCCCCCCEEEEEEECCCEEECCCHHHHHHEEECCCCCCCEEHHHHHHHHH YLLSLAKSFIESGTYKQILIIGAEKTSSVLDFSDRSTCVLFGDGAGACVIGSTNDEKAAI HHHHHHHHHHHCCCCEEEEEEECCCCCCEEECCCCCEEEEEECCCCEEEEECCCCCCEEE LGVNVSANGRYQDFLCTPRVHATFGATQAQEKQSFIQMKGNETFKVAVKTLVSEVKEILN EEEEECCCCCEEEEEECCCEEEECCCCHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHH THHINPQDVSFFIPHQANLRIINAVGENLNFTPEQIVVSIQKYGNTSAASIPMAMNDLYE HCCCCCCCEEEECCCCCCEEEEEECCCCCCCCHHHHEEEHHHCCCCCCCCCCHHHHHHHH EKKLKYGDLMLLDALGGGLTWGSALVHFGGTN HHCCCCCCEEEEECCCCCCCCCHHEEECCCCC >Mature Secondary Structure GKIYASLKSIASYIPPTCISNVDFEKTLDTNDEWITKRTGIKTRYFALPSQQTSDLAYE CHHHHHHHHHHHHCCCHHHCCCCCHHCCCCCCHHEEHHCCCCEEEEECCCCCCHHHHHH AGKKAIERAGIEPKDIDAVIVATLSPDYLTMPSTACITSFKLGIENKAAFDISAACSGFV HHHHHHHHCCCCCCCCCEEEEEEECCCEEECCCHHHHHHEEECCCCCCCEEHHHHHHHHH YLLSLAKSFIESGTYKQILIIGAEKTSSVLDFSDRSTCVLFGDGAGACVIGSTNDEKAAI HHHHHHHHHHHCCCCEEEEEEECCCCCCEEECCCCCEEEEEECCCCEEEEECCCCCCEEE LGVNVSANGRYQDFLCTPRVHATFGATQAQEKQSFIQMKGNETFKVAVKTLVSEVKEILN EEEEECCCCCEEEEEECCCEEEECCCCHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHH THHINPQDVSFFIPHQANLRIINAVGENLNFTPEQIVVSIQKYGNTSAASIPMAMNDLYE HCCCCCCCEEEECCCCCCEEEEEECCCCCCCCHHHHEEEHHHCCCCCCCCCCHHHHHHHH EKKLKYGDLMLLDALGGGLTWGSALVHFGGTN HHCCCCCCEEEEECCCCCCCCCHHEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12810954