| Definition | Helicobacter hepaticus ATCC 51449 chromosome, complete genome. |
|---|---|
| Accession | NC_004917 |
| Length | 1,799,146 |
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The map label for this gene is cheW
Identifier: 32266172
GI number: 32266172
Start: 653031
End: 653522
Strand: Direct
Name: cheW
Synonym: HH0673
Alternate gene names: 32266172
Gene position: 653031-653522 (Clockwise)
Preceding gene: 32266171
Following gene: 32266174
Centisome position: 36.3
GC content: 35.98
Gene sequence:
>492_bases ATGAGCGAAAATAAATTAAAAGAAGTCCTTGAAAAACAACAGAACAAAGAAAGCGACATTGCTACTGAAGAGACACTCCA TATCATAGGCTTTATGGTTGGCAATGAAGAATATGCTGTGCCTATTTTGAATGTAAAGGAAATTGTAAAGCCTATTGAAT TCACTCGTGTCCCTGCAGTTCCTGATTATGTGCTTGGTGTATTTAATCTGCGCGGAACGGTTTTACCTCTTATTAATATG CGCTTAAAGTTTGGCTTACCTGCTATTAAACAAGATGCAGATACAAGATACCTTATCATCAACCAACAAGACGAAATGAT TGGATTTATGATTGATAAACTCACAGCTGCAGTGCGTATCCCTCAAAGTGATATTGAACCCATTCCAGAATCTTTTAATG AAAATCAAAATCTTTTGCGAGGTATTGGTAAGCGCGAAGATAGACTAATTACTATTTTACGTGTAGAAAATCTTCTCAAA CGCACTTTTTGA
Upstream 100 bases:
>100_bases GAATCAGGTATGACAGAATACATCACAAAACCTTACACGCCAGAATATTTAGTTAATGTCGTTCGGCGAAACATCAACCT CACAATAGATGGAGAATAAA
Downstream 100 bases:
>100_bases TTCCCCTATTTTGCTCTCCATTTTGAGAGCAAAACACTCAATAACTAACCACCCTTTAAGTTTCCTGCTTTTCCCATTTT CCTTGAATTTATCCCTCACT
Product: chemotaxis signal transduction response regulator CheW
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 163; Mature: 162
Protein sequence:
>163_residues MSENKLKEVLEKQQNKESDIATEETLHIIGFMVGNEEYAVPILNVKEIVKPIEFTRVPAVPDYVLGVFNLRGTVLPLINM RLKFGLPAIKQDADTRYLIINQQDEMIGFMIDKLTAAVRIPQSDIEPIPESFNENQNLLRGIGKREDRLITILRVENLLK RTF
Sequences:
>Translated_163_residues MSENKLKEVLEKQQNKESDIATEETLHIIGFMVGNEEYAVPILNVKEIVKPIEFTRVPAVPDYVLGVFNLRGTVLPLINM RLKFGLPAIKQDADTRYLIINQQDEMIGFMIDKLTAAVRIPQSDIEPIPESFNENQNLLRGIGKREDRLITILRVENLLK RTF >Mature_162_residues SENKLKEVLEKQQNKESDIATEETLHIIGFMVGNEEYAVPILNVKEIVKPIEFTRVPAVPDYVLGVFNLRGTVLPLINMR LKFGLPAIKQDADTRYLIINQQDEMIGFMIDKLTAAVRIPQSDIEPIPESFNENQNLLRGIGKREDRLITILRVENLLKR TF
Specific function: Involved in the transmission of sensory signals from the chemoreceptors to the flagellar motors [H]
COG id: COG0835
COG function: function code NT; Chemotaxis signal transduction protein
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 cheW-like domain [H]
Homologues:
Organism=Escherichia coli, GI1788196, Length=130, Percent_Identity=30, Blast_Score=81, Evalue=3e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002545 [H]
Pfam domain/function: PF01584 CheW [H]
EC number: NA
Molecular weight: Translated: 18690; Mature: 18559
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: PS50851 CHEW
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSENKLKEVLEKQQNKESDIATEETLHIIGFMVGNEEYAVPILNVKEIVKPIEFTRVPAV CCHHHHHHHHHHHCCCCCCCHHHHHHHHEEEEECCCCEEEEEECHHHHHHHHHHHCCCCC PDYVLGVFNLRGTVLPLINMRLKFGLPAIKQDADTRYLIINQQDEMIGFMIDKLTAAVRI HHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCC PQSDIEPIPESFNENQNLLRGIGKREDRLITILRVENLLKRTF CCHHCCCCCHHCCCCHHHHHHCCCCCHHEEHHHHHHHHHHHCC >Mature Secondary Structure SENKLKEVLEKQQNKESDIATEETLHIIGFMVGNEEYAVPILNVKEIVKPIEFTRVPAV CHHHHHHHHHHHCCCCCCCHHHHHHHHEEEEECCCCEEEEEECHHHHHHHHHHHCCCCC PDYVLGVFNLRGTVLPLINMRLKFGLPAIKQDADTRYLIINQQDEMIGFMIDKLTAAVRI HHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCC PQSDIEPIPESFNENQNLLRGIGKREDRLITILRVENLLKRTF CCHHCCCCCHHCCCCHHHHHHCCCCCHHEEHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1601874; 9384377 [H]