| Definition | Helicobacter hepaticus ATCC 51449 chromosome, complete genome. |
|---|---|
| Accession | NC_004917 |
| Length | 1,799,146 |
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The map label for this gene is lutA [H]
Identifier: 32266149
GI number: 32266149
Start: 629022
End: 629753
Strand: Direct
Name: lutA [H]
Synonym: HH0650
Alternate gene names: 32266149
Gene position: 629022-629753 (Clockwise)
Preceding gene: 32266147
Following gene: 32266150
Centisome position: 34.96
GC content: 38.8
Gene sequence:
>732_bases ATGCGAGTATTTTTTTTCTCAACTTGTCTAGGAAGTTTAGCGTATGCTGATACTTGCGTAAATGCAATCAGATTATTACA AAAAGAGGGGTGTGAAGTCATTTTTAAAAAAGACCAAACTTGTTGTGCACAACCAAGCTATAATTCGGGCTATTATGAGG AAAGCCGCAAAGTTGCTCTCCATAATATAGCACTTTTTGAGGGAGAAGAACCAATTATTGTGCCTTCAGGCTCTTGTGCA GGTATGATGAGAGAGGATTATTTAGCACTTTTTGAGGGAAGAAGCGAACTTGAGAAGGTAAAACAATTTTGCTCACGTGT ATATGATTTAGGCGAATACCTACATAAGATACTCAATGTCCGATATGAAGATAAAGGTGCGCCTACCAAAGTTACTTGGC ATAGTAATTGCCACGCTTTACGCACCTCTAAAGTTGTTGATAGCGCAAAGGCTCTCATTACTTCATTGCAAAATGTTGAG CTTATTGAACTAGAACGAGAAGAAGAATGCTGCGGCTTTGGTGGGACTTTTAGCATTAAAGAGCCGGAAGTATCAAATGC AATGGTGAGCCAGAAAATTGAGGATATTCTTTCAAGAAATGTAGAATATGTAATTTCAGCAGATGCAGGGTGCTTACTTA ATATCAGCGGGGCAATGCAAAAGCAAAAAATCGCTGTCAAACCCATTCATCTCTATGATTTCTTAGCCCAAAGAATCGGA TTAGGAGCATAA
Upstream 100 bases:
>100_bases ACATTTATAAAAAGAAAAATAACTAAACTTTTACCTTTTGTATTTTTAAAGCTCCTTATTTATATCATAATTGTTTTATG AAATTTAGGAAGGAGTTAAT
Downstream 100 bases:
>100_bases TTATGAGCCATCAAGAACATACCAATATCGTCCATACCAAACTCAATGACAAACAACTCCGCACTAACCTTAAGAGTGTA ATGGACACCCTTAAAGGGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 243; Mature: 243
Protein sequence:
>243_residues MRVFFFSTCLGSLAYADTCVNAIRLLQKEGCEVIFKKDQTCCAQPSYNSGYYEESRKVALHNIALFEGEEPIIVPSGSCA GMMREDYLALFEGRSELEKVKQFCSRVYDLGEYLHKILNVRYEDKGAPTKVTWHSNCHALRTSKVVDSAKALITSLQNVE LIELEREEECCGFGGTFSIKEPEVSNAMVSQKIEDILSRNVEYVISADAGCLLNISGAMQKQKIAVKPIHLYDFLAQRIG LGA
Sequences:
>Translated_243_residues MRVFFFSTCLGSLAYADTCVNAIRLLQKEGCEVIFKKDQTCCAQPSYNSGYYEESRKVALHNIALFEGEEPIIVPSGSCA GMMREDYLALFEGRSELEKVKQFCSRVYDLGEYLHKILNVRYEDKGAPTKVTWHSNCHALRTSKVVDSAKALITSLQNVE LIELEREEECCGFGGTFSIKEPEVSNAMVSQKIEDILSRNVEYVISADAGCLLNISGAMQKQKIAVKPIHLYDFLAQRIG LGA >Mature_243_residues MRVFFFSTCLGSLAYADTCVNAIRLLQKEGCEVIFKKDQTCCAQPSYNSGYYEESRKVALHNIALFEGEEPIIVPSGSCA GMMREDYLALFEGRSELEKVKQFCSRVYDLGEYLHKILNVRYEDKGAPTKVTWHSNCHALRTSKVVDSAKALITSLQNVE LIELEREEECCGFGGTFSIKEPEVSNAMVSQKIEDILSRNVEYVISADAGCLLNISGAMQKQKIAVKPIHLYDFLAQRIG LGA
Specific function: Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source [H]
COG id: COG0247
COG function: function code C; Fe-S oxidoreductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lutA/ykgE family [H]
Homologues:
Organism=Escherichia coli, GI1786497, Length=240, Percent_Identity=33.75, Blast_Score=151, Evalue=5e-38, Organism=Escherichia coli, GI1788576, Length=211, Percent_Identity=25.1184834123223, Blast_Score=65, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004017 - InterPro: IPR022822 [H]
Pfam domain/function: PF02754 CCG [H]
EC number: NA
Molecular weight: Translated: 27146; Mature: 27146
Theoretical pI: Translated: 5.70; Mature: 5.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 4.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVFFFSTCLGSLAYADTCVNAIRLLQKEGCEVIFKKDQTCCAQPSYNSGYYEESRKVAL CEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHHHEEE HNIALFEGEEPIIVPSGSCAGMMREDYLALFEGRSELEKVKQFCSRVYDLGEYLHKILNV HEEEEECCCCCEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCC RYEDKGAPTKVTWHSNCHALRTSKVVDSAKALITSLQNVELIELEREEECCGFGGTFSIK EECCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHCCCCCEEECC EPEVSNAMVSQKIEDILSRNVEYVISADAGCLLNISGAMQKQKIAVKPIHLYDFLAQRIG CCCHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEECCHHHHCCEEECCHHHHHHHHHHHC LGA CCC >Mature Secondary Structure MRVFFFSTCLGSLAYADTCVNAIRLLQKEGCEVIFKKDQTCCAQPSYNSGYYEESRKVAL CEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHHHEEE HNIALFEGEEPIIVPSGSCAGMMREDYLALFEGRSELEKVKQFCSRVYDLGEYLHKILNV HEEEEECCCCCEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCC RYEDKGAPTKVTWHSNCHALRTSKVVDSAKALITSLQNVELIELEREEECCGFGGTFSIK EECCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHCCCCCEEECC EPEVSNAMVSQKIEDILSRNVEYVISADAGCLLNISGAMQKQKIAVKPIHLYDFLAQRIG CCCHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEECCHHHHCCEEECCHHHHHHHHHHHC LGA CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12235376 [H]